RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 2310061N02RikQ9D6S9 174 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Trav13-2A0A075B649 110 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Camk2n2Q78WH7 79 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Dnah17Q69Z23 4481 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Igkv4-92A0A0B4J1I2 117 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Sostdc1Q9CQN4 206 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Ubl5Q9EPV8 73 aa4.98□□□□□ -1.61
Usp40-204ENSMUST00000187758 Tcl1b5P56845 121 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 Defb29Q8BGW9 78 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 Ly6g6cQ9Z1Q4 126 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 Gm10518F6UQQ9 182 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 Gm5617Q91VN2 117 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 Reg3dQ9QUS9 175 aa4.97□□□□□ -1.61
Usp40-204ENSMUST00000187758 A730009L09RikA0A1B0GS82 72 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 C530025M09RikF6RGA8 229 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 7530416G11RikJ3QJX6 159 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 Rbm3O89086 153 aaKnown RBP4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 Gm9507D3Z5T3 223 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 Ufsp1Q9CZP0 217 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 Wfdc12Q9JHY3 85 aa4.96□□□□□ -1.62
Usp40-204ENSMUST00000187758 Igkv1-35A0A0G2JDE5 120 aa4.95□□□□□ -1.62
Usp40-204ENSMUST00000187758 Huwe1Q7TMY8 4377 aaKnown RBP4.95□□□□□ -1.62
Usp40-204ENSMUST00000187758 Tenm2Q9WTS5 2764 aa4.95□□□□□ -1.62
Usp40-204ENSMUST00000187758 A0A286YCN5 57 aa4.95□□□□□ -1.62
Usp40-204ENSMUST00000187758 Tcl1b3P56842 122 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Nupr2Q497P3 102 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 BaalcQ8VHV1 145 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Serp1Q9Z1W5 66 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Igkv3-2A0A075B5P0 119 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Trav14-1A0A0G2JF94 121 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Igkv3-12A0A140T8P0 119 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 BikO70337 150 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Gm9903Q8C9Y8 129 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 Sprr4Q8CGN8 76 aa4.94□□□□□ -1.62
Usp40-204ENSMUST00000187758 4930524J08RikQ9CUJ5 163 aa4.93□□□□□ -1.62
Usp40-204ENSMUST00000187758 Inafm2A0A1L1STD6 152 aa4.93□□□□□ -1.62
Usp40-204ENSMUST00000187758 MplkipQ9D011 178 aa4.93□□□□□ -1.62
Usp40-204ENSMUST00000187758 Ntn5Q3UQ22 452 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 Ormdl1Q921I0 153 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 4930519P11RikQ9CUJ8 166 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 Igkv8-18A0A0B4J1J3 123 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 U90926O08546 118 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 Ndufc1Q9CQY9 76 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 Ube2d4D3YUH6 135 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 Cdk2ap2Q9CPY4 127 aa4.92□□□□□ -1.62
Usp40-204ENSMUST00000187758 H2al1bA0A087WP11 105 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 H2al1kJ3QP08 105 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 CnbpP53996 178 aaKnown RBP4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 Gm10549Q3URY4 149 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 H2al1eQ810S6 105 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 H2al1mQ9DAD9 105 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 Vpreb2P13373 142 aa4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 Rpl28P41105 137 aaKnown RBP4.91□□□□□ -1.62
Usp40-204ENSMUST00000187758 Gm37389A0A0A6YW05 95 aa4.9□□□□□ -1.62
Usp40-204ENSMUST00000187758 Gm17577J3QNF7 156 aa4.9□□□□□ -1.62
Usp40-204ENSMUST00000187758 Cox7bP56393 80 aa4.9□□□□□ -1.62
Usp40-204ENSMUST00000187758 Defb40Q70KL2 73 aa4.9□□□□□ -1.62
Usp40-204ENSMUST00000187758 Csmd3Q80T79 3707 aa4.9□□□□□ -1.63
Usp40-204ENSMUST00000187758 Igkv1-117A0A140T8M0 119 aa4.9□□□□□ -1.63
Usp40-204ENSMUST00000187758 Spink8Q09TK9 105 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 Eif4ebp3Q80VV3 101 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 Igkv1-88A0A140T8N1 120 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm11627A6PWP4 55 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm5153P01627 120 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 OxtP35454 125 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 PscaP57096 123 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 SnurfQ9WU12 71 aa4.89□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm9918Q8BUR5 174 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 2310050C09RikG5E8Z3 280 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm10837Q3UTT8 145 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 Dph3Q8K0W9 82 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 1700012A03RikQ9DAF1 130 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 Znf414Q9DCK4 299 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 Sprr1aQ62266 144 aa4.88□□□□□ -1.63
Usp40-204ENSMUST00000187758 Dnah7bL7N1Y0 4068 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 Dnah1E9Q8T7 4250 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 Trav13n-2A0A0G2JF93 110 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 SycnQ8VCK7 134 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 BC048502Q80Y74 154 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 AY074887Q8R5F9 132 aa4.87□□□□□ -1.63
Usp40-204ENSMUST00000187758 Sec61gP60060 68 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 Rpl39lQ9CQD0 51 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 4930535I16RikQ9CUI2 172 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm10845Q3UNY9 185 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm9805F6YK59 57 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 Fam19a1Q7TPG8 133 aa4.86□□□□□ -1.63
Usp40-204ENSMUST00000187758 Igkv2-109A0A075B5K6 120 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 P01819 144 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 Plac8Q9JI48 112 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 Dync2h1Q45VK7 4306 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 Gm5142Q8C5X9 133 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 Obox2E9PXV9 151 aa4.85□□□□□ -1.63
Usp40-204ENSMUST00000187758 Wfdc6bF6ULY1 148 aa4.84□□□□□ -1.63
Usp40-204ENSMUST00000187758 Klk12B2RVZ0 247 aa4.84□□□□□ -1.64
Usp40-204ENSMUST00000187758 PrkdcP97313 4128 aa4.84□□□□□ -1.64
Usp40-204ENSMUST00000187758 E130218I03RikA0A0U1RNU5 63 aa4.83□□□□□ -1.64
Usp40-204ENSMUST00000187758 UqcrqQ9CQ69 82 aa4.83□□□□□ -1.64
Usp40-204ENSMUST00000187758 A530084C06RikQ3UTW2 186 aa4.83□□□□□ -1.64
Usp40-204ENSMUST00000187758 PlecQ9QXS1 4691 aaKnown RBP4.82□□□□□ -1.64
Usp40-204ENSMUST00000187758 Fam168bQ80XQ8 194 aa4.82□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms