Protein–RNA interactions for Protein: P53996

Cnbp, Cellular nucleic acid-binding protein, mousemouse

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CnbpP53996 Gm25239-201ENSMUST00000174915 86 ntBASIC24.31■■□□□ 1.48
CnbpP53996 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CnbpP53996 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CnbpP53996 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CnbpP53996 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CnbpP53996 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CnbpP53996 Gm15042-201ENSMUST00000120212 883 ntBASIC21.55■■□□□ 1.04
CnbpP53996 Psd-208ENSMUST00000224556 2034 ntBASIC21.12■□□□□ 0.97
CnbpP53996 Gm15045-201ENSMUST00000117359 883 ntBASIC21.1■□□□□ 0.97
CnbpP53996 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CnbpP53996 Gm24109-201ENSMUST00000175489 103 ntBASIC20.93■□□□□ 0.94
CnbpP53996 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CnbpP53996 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CnbpP53996 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CnbpP53996 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CnbpP53996 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.49■□□□□ 0.87
CnbpP53996 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CnbpP53996 Gm23366-201ENSMUST00000175022 89 ntBASIC20.38■□□□□ 0.85
CnbpP53996 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CnbpP53996 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CnbpP53996 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CnbpP53996 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CnbpP53996 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CnbpP53996 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CnbpP53996 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CnbpP53996 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CnbpP53996 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CnbpP53996 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CnbpP53996 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CnbpP53996 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.02■□□□□ 0.8
CnbpP53996 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CnbpP53996 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CnbpP53996 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CnbpP53996 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CnbpP53996 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CnbpP53996 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CnbpP53996 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.76■□□□□ 0.75
CnbpP53996 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.73■□□□□ 0.75
CnbpP53996 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CnbpP53996 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CnbpP53996 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CnbpP53996 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
CnbpP53996 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CnbpP53996 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CnbpP53996 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.31■□□□□ 0.68
CnbpP53996 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CnbpP53996 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CnbpP53996 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.23■□□□□ 0.67
CnbpP53996 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CnbpP53996 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CnbpP53996 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CnbpP53996 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CnbpP53996 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.1■□□□□ 0.65
CnbpP53996 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.09■□□□□ 0.65
CnbpP53996 Gm25238-201ENSMUST00000174914 89 ntBASIC19.07■□□□□ 0.64
CnbpP53996 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CnbpP53996 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CnbpP53996 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CnbpP53996 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CnbpP53996 Gm42596-201ENSMUST00000196305 1958 ntBASIC19■□□□□ 0.63
CnbpP53996 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CnbpP53996 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CnbpP53996 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CnbpP53996 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.95■□□□□ 0.62
CnbpP53996 Gm27325-201ENSMUST00000175467 74 ntBASIC18.94■□□□□ 0.62
CnbpP53996 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CnbpP53996 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CnbpP53996 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CnbpP53996 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CnbpP53996 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.85■□□□□ 0.61
CnbpP53996 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.83■□□□□ 0.61
CnbpP53996 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CnbpP53996 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CnbpP53996 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CnbpP53996 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CnbpP53996 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CnbpP53996 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CnbpP53996 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.74■□□□□ 0.59
CnbpP53996 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CnbpP53996 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CnbpP53996 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CnbpP53996 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CnbpP53996 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CnbpP53996 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CnbpP53996 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.63■□□□□ 0.57
CnbpP53996 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CnbpP53996 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.59■□□□□ 0.57
CnbpP53996 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CnbpP53996 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CnbpP53996 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.49■□□□□ 0.55
CnbpP53996 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CnbpP53996 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CnbpP53996 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CnbpP53996 Rab21-202ENSMUST00000218831 843 ntBASIC18.43■□□□□ 0.54
CnbpP53996 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CnbpP53996 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CnbpP53996 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CnbpP53996 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CnbpP53996 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CnbpP53996 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms