Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm25239-201ENSMUST00000174915 86 ntBASIC28.92■■■□□ 2.22
PrkdcP97313 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PrkdcP97313 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PrkdcP97313 Gm24109-201ENSMUST00000175489 103 ntBASIC25.44■■□□□ 1.66
PrkdcP97313 Gm15042-201ENSMUST00000120212 883 ntBASIC24.59■■□□□ 1.53
PrkdcP97313 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PrkdcP97313 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PrkdcP97313 Gm15045-201ENSMUST00000117359 883 ntBASIC24.18■■□□□ 1.46
PrkdcP97313 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PrkdcP97313 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PrkdcP97313 Gm23366-201ENSMUST00000175022 89 ntBASIC23.88■■□□□ 1.41
PrkdcP97313 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.78■■□□□ 1.4
PrkdcP97313 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PrkdcP97313 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.71■■□□□ 1.39
PrkdcP97313 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PrkdcP97313 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
PrkdcP97313 Gm25238-201ENSMUST00000174914 89 ntBASIC23.08■■□□□ 1.29
PrkdcP97313 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PrkdcP97313 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PrkdcP97313 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.99■■□□□ 1.27
PrkdcP97313 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PrkdcP97313 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PrkdcP97313 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
PrkdcP97313 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PrkdcP97313 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PrkdcP97313 Gm25262-201ENSMUST00000174934 133 ntBASIC22.33■■□□□ 1.17
PrkdcP97313 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PrkdcP97313 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.1■■□□□ 1.13
PrkdcP97313 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
PrkdcP97313 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.98■■□□□ 1.11
PrkdcP97313 Gm26115-201ENSMUST00000175605 87 ntBASIC21.96■■□□□ 1.11
PrkdcP97313 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PrkdcP97313 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.94■■□□□ 1.1
PrkdcP97313 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.94■■□□□ 1.1
PrkdcP97313 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PrkdcP97313 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PrkdcP97313 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PrkdcP97313 Gm8109-201ENSMUST00000194076 746 ntBASIC21.76■■□□□ 1.07
PrkdcP97313 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.7■■□□□ 1.06
PrkdcP97313 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PrkdcP97313 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PrkdcP97313 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.64■■□□□ 1.05
PrkdcP97313 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PrkdcP97313 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PrkdcP97313 Gm27325-201ENSMUST00000175467 74 ntBASIC21.57■■□□□ 1.04
PrkdcP97313 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PrkdcP97313 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.53■■□□□ 1.04
PrkdcP97313 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PrkdcP97313 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PrkdcP97313 Rab21-202ENSMUST00000218831 843 ntBASIC21.48■■□□□ 1.03
PrkdcP97313 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.47■■□□□ 1.03
PrkdcP97313 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PrkdcP97313 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.35■■□□□ 1.01
PrkdcP97313 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.31■■□□□ 1
PrkdcP97313 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.28■■□□□ 1
PrkdcP97313 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.28■■□□□ 1
PrkdcP97313 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.27■■□□□ 1
PrkdcP97313 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PrkdcP97313 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PrkdcP97313 Gm24804-201ENSMUST00000174982 85 ntBASIC21.13■□□□□ 0.97
PrkdcP97313 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrkdcP97313 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PrkdcP97313 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PrkdcP97313 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PrkdcP97313 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PrkdcP97313 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PrkdcP97313 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.93■□□□□ 0.94
PrkdcP97313 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PrkdcP97313 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.85■□□□□ 0.93
PrkdcP97313 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.84■□□□□ 0.93
PrkdcP97313 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.82■□□□□ 0.92
PrkdcP97313 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrkdcP97313 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrkdcP97313 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrkdcP97313 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrkdcP97313 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.69■□□□□ 0.9
PrkdcP97313 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrkdcP97313 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.66■□□□□ 0.9
PrkdcP97313 Zfp131-205ENSMUST00000223812 663 ntBASIC20.65■□□□□ 0.9
PrkdcP97313 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PrkdcP97313 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PrkdcP97313 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PrkdcP97313 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PrkdcP97313 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PrkdcP97313 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PrkdcP97313 Gm27322-201ENSMUST00000184007 104 ntBASIC20.57■□□□□ 0.88
PrkdcP97313 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PrkdcP97313 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.56■□□□□ 0.88
PrkdcP97313 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.52■□□□□ 0.88
PrkdcP97313 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.5■□□□□ 0.87
PrkdcP97313 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PrkdcP97313 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PrkdcP97313 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PrkdcP97313 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PrkdcP97313 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PrkdcP97313 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.41■□□□□ 0.86
PrkdcP97313 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PrkdcP97313 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.41■□□□□ 0.86
PrkdcP97313 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PrkdcP97313 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms