RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Q8BGJ3 129 aa9.87□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Setd2E9Q5F9 2537 aa9.86□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 7530416G11RikJ3QJX6 159 aa9.86□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 AY074887Q8R5F9 132 aa9.86□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Spaca4Q80ZQ0 127 aa9.84□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Zfp462B1AWL2 2495 aaKnown RBP9.84□□□□□ -0.83
Pcdh20-201ENSMUST00000061628 Coa5Q99M07 74 aa9.83□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 AplnQ9R0R4 77 aa9.83□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 Hcfc1Q61191 2045 aaKnown RBP9.83□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 Gm7276Q3TYW4 209 aa9.82□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 Rpl37aP61514 92 aa9.82□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 Krtap11-1E9Q2E9 183 aa9.8□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 MtorQ9JLN9 2549 aa9.79□□□□□ -0.84
Pcdh20-201ENSMUST00000061628 Phxr4P15974 95 aa9.77□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Fam168bQ80XQ8 194 aa9.76□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Gm5617Q91VN2 117 aa9.76□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Epg5Q80TA9 2572 aa9.76□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Prr13Q9CQJ5 137 aa9.75□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Uqcr11Q9CPX8 56 aa9.74□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Lypd5Q9D7Z7 256 aa9.74□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 1810062G17RikG3X8Y2 129 aa9.74□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Eif4ebp3Q80VV3 101 aa9.74□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Gm11213A0A1B0GR83 88 aa9.73□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Mp68P56379 58 aa9.72□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Gm10643Q3URG9 111 aa9.71□□□□□ -0.85
Pcdh20-201ENSMUST00000061628 Cep192E9Q4Y4 2514 aaKnown RBP9.69□□□□□ -0.86
Pcdh20-201ENSMUST00000061628 Bahcc1Q3UHR0 2643 aa9.69□□□□□ -0.86
Pcdh20-201ENSMUST00000061628 Cypt15B1AXS0 87 aa9.66□□□□□ -0.86
Pcdh20-201ENSMUST00000061628 Gm3250E9Q1M3 230 aa9.65□□□□□ -0.86
Pcdh20-201ENSMUST00000061628 RetnlbQ99P86 105 aa9.65□□□□□ -0.86
Pcdh20-201ENSMUST00000061628 C530025M09RikF6RGA8 229 aa9.65□□□□□ -0.87
Pcdh20-201ENSMUST00000061628 Defb1P56386 69 aa9.64□□□□□ -0.87
Pcdh20-201ENSMUST00000061628 CnbpP53996 178 aaKnown RBP9.63□□□□□ -0.87
Pcdh20-201ENSMUST00000061628 A330070K13RikQ8CA53 115 aa9.61□□□□□ -0.87
Pcdh20-201ENSMUST00000061628 Fam104aA2A6P4 185 aa9.59□□□□□ -0.87
Pcdh20-201ENSMUST00000061628 Defb9Q8R2I6 67 aa9.58□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 Zcchc13Q9D548 170 aa9.56□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 Unc79Q0KK59 2596 aa9.56□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 Gm11565A2A4M7 156 aa9.55□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 Abca12E9Q876 2595 aa9.54□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 Gm26620Q9CY65 116 aa9.54□□□□□ -0.88
Pcdh20-201ENSMUST00000061628 OxtP35454 125 aa9.51□□□□□ -0.89
Pcdh20-201ENSMUST00000061628 Gm20538F6Z9R1 75 aa9.5□□□□□ -0.89
Pcdh20-201ENSMUST00000061628 Chtf8P0CG14 533 aa9.49□□□□□ -0.89
Pcdh20-201ENSMUST00000061628 Ankrd17Q99NH0 2603 aaKnown RBP9.47□□□□□ -0.89
Pcdh20-201ENSMUST00000061628 Rnase13Q5GAM7 153 aa9.47□□□□□ -0.89
Pcdh20-201ENSMUST00000061628 Cypt14J3QPF7 87 aa9.45□□□□□ -0.9
Pcdh20-201ENSMUST00000061628 Myo18bE9PV66 2605 aa9.44□□□□□ -0.9
Pcdh20-201ENSMUST00000061628 Phxr5P08399 672 aa9.43□□□□□ -0.9
Pcdh20-201ENSMUST00000061628 Usp9yF8VPU6 2556 aa9.43□□□□□ -0.9
Pcdh20-201ENSMUST00000061628 Gm21798J3QNU5 87 aa9.4□□□□□ -0.9
Pcdh20-201ENSMUST00000061628 Gm10065F6TJM2 114 aa9.39□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 Plac8Q9JI48 112 aa9.38□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 2310034C09RikQ9D746 214 aa9.38□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 Anapc11Q9CPX9 84 aa9.37□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 NbdyA0A0N4SUI7 68 aa9.37□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 CicQ924A2 2510 aa9.35□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 Nbeal1E9PYP2 2688 aa9.34□□□□□ -0.91
Pcdh20-201ENSMUST00000061628 Fam229bQ8CF36 80 aa9.33□□□□□ -0.92
Pcdh20-201ENSMUST00000061628 CriptO70333 101 aa9.3□□□□□ -0.92
Pcdh20-201ENSMUST00000061628 Gm9955Q8CEJ8 102 aa9.27□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Ankrd11E9Q4F7 2643 aa9.26□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 FasnP19096 2504 aaKnown RBP9.26□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Gm9821Q8K076 103 aa9.23□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Smim29Q8R043 75 aa9.23□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Zfp292Q9Z2U2 2698 aa9.23□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Gm3233E9Q2H5 230 aa9.22□□□□□ -0.93
Pcdh20-201ENSMUST00000061628 Odf3bQ5M8M2 238 aa9.2□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 6030445D17RikE9Q8F9 148 aa9.19□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 SrcapA0A087WQ44 3271 aa9.19□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 Gm10320E9PW43 113 aa9.18□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 Gm10139O88245 57 aa9.18□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 Pla2g10Q9QXX3 151 aa9.15□□□□□ -0.94
Pcdh20-201ENSMUST00000061628 Gm4491E0CX42 125 aa9.13□□□□□ -0.95
Pcdh20-201ENSMUST00000061628 Sprr1aQ62266 144 aa9.13□□□□□ -0.95
Pcdh20-201ENSMUST00000061628 FlnbQ80X90 2602 aaKnown RBP9.13□□□□□ -0.95
Pcdh20-201ENSMUST00000061628 Lelp1Q9DAE3 120 aa9.12□□□□□ -0.95
Pcdh20-201ENSMUST00000061628 Fn1P11276 2477 aaKnown RBP9.09□□□□□ -0.95
Pcdh20-201ENSMUST00000061628 Nsd1O88491 2588 aaKnown RBP9.07□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Gm3880A0A1B0GSB3 72 aa9.07□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Usp24B1AY13 2617 aaKnown RBP9.05□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Gm7138L7N2C3 230 aa9.04□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Gm3238W4VSP7 230 aa9.04□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Gm16253D3Z167 63 aa9.04□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 AtrQ9JKK8 2635 aa9.04□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 FlnaQ8BTM8 2647 aaKnown RBP9.04□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 CenpfE9Q3P4 2997 aaKnown RBP9.03□□□□□ -0.96
Pcdh20-201ENSMUST00000061628 Gcn1E9PVA8 2671 aaKnown RBP9□□□□□ -0.97
Pcdh20-201ENSMUST00000061628 Spink7Q6IE32 76 aa8.99□□□□□ -0.97
Pcdh20-201ENSMUST00000061628 Cystm1Q8K353 104 aa8.98□□□□□ -0.97
Pcdh20-201ENSMUST00000061628 A730071L15RikQ8C4X0 137 aa8.97□□□□□ -0.97
Pcdh20-201ENSMUST00000061628 Dmbt1Q60997 2085 aa8.95□□□□□ -0.98
Pcdh20-201ENSMUST00000061628 Gm9195A0A140LHT4 2805 aa8.94□□□□□ -0.98
Pcdh20-201ENSMUST00000061628 Gm37013Q8K491 104 aa8.94□□□□□ -0.98
Pcdh20-201ENSMUST00000061628 Notch1Q01705 2531 aa8.89□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Gm7137J3QMW1 236 aa8.87□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Fam229aB2KGE5 128 aa8.86□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Gm3646F6S692 53 aa8.85□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Gm17349F7BGH6 99 aa8.85□□□□□ -0.99
Pcdh20-201ENSMUST00000061628 Krtap15-1Q9QZU5 150 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms