RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Rhox8Q6VSS7 320 aa25.97■■□□□ 1.75
Pcdh20-201ENSMUST00000061628 Rpgrip1Q9EPQ2 1331 aa24.14■■□□□ 1.45
Pcdh20-201ENSMUST00000061628 Cngb1E1AZ71 1325 aa23.18■■□□□ 1.3
Pcdh20-201ENSMUST00000061628 Las1lA2BE28 776 aaKnown RBP23.07■■□□□ 1.28
Pcdh20-201ENSMUST00000061628 Ehmt2Q9Z148 1263 aaKnown RBP22.99■■□□□ 1.27
Pcdh20-201ENSMUST00000061628 Esf1Q3V1V3 845 aaKnown RBP22.91■■□□□ 1.26
Pcdh20-201ENSMUST00000061628 Ccdc136Q3TVA9 1136 aa22.9■■□□□ 1.26
Pcdh20-201ENSMUST00000061628 Trim41Q5NCC3 630 aa22.78■■□□□ 1.24
Pcdh20-201ENSMUST00000061628 Wdr66E9Q743 1299 aa22.72■■□□□ 1.23
Pcdh20-201ENSMUST00000061628 Pelp1Q9DBD5 1123 aaKnown RBP22.69■■□□□ 1.22
Pcdh20-201ENSMUST00000061628 NischQ80TM9 1593 aa22.57■■□□□ 1.2
Pcdh20-201ENSMUST00000061628 Ube2uB1AUC4 352 aa22.54■■□□□ 1.2
Pcdh20-201ENSMUST00000061628 Zeb1Q64318 1117 aa22.47■■□□□ 1.19
Pcdh20-201ENSMUST00000061628 Gab3Q8BSM5 595 aa22.46■■□□□ 1.19
Pcdh20-201ENSMUST00000061628 Npm2Q80W85 207 aa22.45■■□□□ 1.19
Pcdh20-201ENSMUST00000061628 Myt1lP97500 1187 aa22.16■■□□□ 1.14
Pcdh20-201ENSMUST00000061628 NefmP08553 848 aa22.12■■□□□ 1.13
Pcdh20-201ENSMUST00000061628 Acin1Q9JIX8 1338 aaKnown RBP22.07■■□□□ 1.12
Pcdh20-201ENSMUST00000061628 Stra8P70278 393 aa21.96■■□□□ 1.11
Pcdh20-201ENSMUST00000061628 CenpbP27790 599 aa21.91■■□□□ 1.1
Pcdh20-201ENSMUST00000061628 HrcG5E8J6 738 aa21.82■■□□□ 1.08
Pcdh20-201ENSMUST00000061628 Ccdc180J3QNE4 1664 aa21.8■■□□□ 1.08
Pcdh20-201ENSMUST00000061628 UbtfP25976 765 aaKnown RBP21.74■■□□□ 1.07
Pcdh20-201ENSMUST00000061628 Rtl1Q7M732 1744 aa21.56■■□□□ 1.04
Pcdh20-201ENSMUST00000061628 Amer1Q7TS75 1132 aa21.4■■□□□ 1.02
Pcdh20-201ENSMUST00000061628 Cdk11bP24788 784 aaKnown RBP21.38■■□□□ 1.01
Pcdh20-201ENSMUST00000061628 Slc24a1Q91WD8 1130 aa21.34■■□□□ 1.01
Pcdh20-201ENSMUST00000061628 Anp32bQ9EST5 272 aaKnown RBP21.32■■□□□ 1
Pcdh20-201ENSMUST00000061628 Il27Q8K3I6 234 aa21.32■■□□□ 1
Pcdh20-201ENSMUST00000061628 Tnnt3Q9QZ47 272 aa21.3■■□□□ 1
Pcdh20-201ENSMUST00000061628 NrdcQ8BHG1 1161 aa21.22■□□□□ 0.99
Pcdh20-201ENSMUST00000061628 Myt1Q8CFC2 1127 aa21.22■□□□□ 0.99
Pcdh20-201ENSMUST00000061628 Zcchc6Q5BLK4 1491 aaKnown RBP21.2■□□□□ 0.98
Pcdh20-201ENSMUST00000061628 Pcgf6Q99NA9 353 aa21.12■□□□□ 0.97
Pcdh20-201ENSMUST00000061628 Fam50aQ9WV03 339 aaKnown RBP21.12■□□□□ 0.97
Pcdh20-201ENSMUST00000061628 NclP09405 707 aaKnown RBP21.09■□□□□ 0.97
Pcdh20-201ENSMUST00000061628 Nop58Q6DFW4 536 aaKnown RBP21.09■□□□□ 0.97
Pcdh20-201ENSMUST00000061628 NeflP08551 543 aa21.05■□□□□ 0.96
Pcdh20-201ENSMUST00000061628 Abcc9P70170 1546 aa20.97■□□□□ 0.95
Pcdh20-201ENSMUST00000061628 Ap3b1Q9Z1T1 1105 aa20.96■□□□□ 0.95
Pcdh20-201ENSMUST00000061628 TonslQ6NZL6 1363 aa20.95■□□□□ 0.94
Pcdh20-201ENSMUST00000061628 Neurod1Q60867 357 aa20.91■□□□□ 0.94
Pcdh20-201ENSMUST00000061628 4930567H17RikQ3V0K5 233 aa20.9■□□□□ 0.94
Pcdh20-201ENSMUST00000061628 Os9Q8K2C7 672 aa20.87■□□□□ 0.93
Pcdh20-201ENSMUST00000061628 4933416C03RikQ3V063 378 aa20.82■□□□□ 0.92
Pcdh20-201ENSMUST00000061628 Rtl5Q5DTT4 599 aa20.8■□□□□ 0.92
Pcdh20-201ENSMUST00000061628 Eif5bQ05D44 1216 aaKnown RBP20.74■□□□□ 0.91
Pcdh20-201ENSMUST00000061628 Mier1Q5UAK0 511 aa20.69■□□□□ 0.9
Pcdh20-201ENSMUST00000061628 Supt5hO55201 1082 aaKnown RBP20.68■□□□□ 0.9
Pcdh20-201ENSMUST00000061628 Ttbk1Q6PCN3 1308 aa20.64■□□□□ 0.9
Pcdh20-201ENSMUST00000061628 Npm1Q61937 292 aaKnown RBP20.63■□□□□ 0.89
Pcdh20-201ENSMUST00000061628 Gm35339A0A140LHH9 1649 aa20.59■□□□□ 0.89
Pcdh20-201ENSMUST00000061628 ClspnQ80YR7 1315 aa20.56■□□□□ 0.88
Pcdh20-201ENSMUST00000061628 Ppargc1bQ8VHJ7 1014 aa20.51■□□□□ 0.87
Pcdh20-201ENSMUST00000061628 Hdac5Q9Z2V6 1113 aa20.45■□□□□ 0.86
Pcdh20-201ENSMUST00000061628 Abcc8B2RUS7 1588 aa20.45■□□□□ 0.86
Pcdh20-201ENSMUST00000061628 Lmod2Q3UHZ5 550 aa20.42■□□□□ 0.86
Pcdh20-201ENSMUST00000061628 Plekhg3Q4VAC9 1341 aa20.39■□□□□ 0.85
Pcdh20-201ENSMUST00000061628 Brd4Q9ESU6 1400 aaKnown RBP20.39■□□□□ 0.85
Pcdh20-201ENSMUST00000061628 Anp32aO35381 247 aa20.37■□□□□ 0.85
Pcdh20-201ENSMUST00000061628 Ccer2J3QPU5 274 aa20.32■□□□□ 0.84
Pcdh20-201ENSMUST00000061628 Hnrnpul2Q00PI9 745 aaKnown RBP20.31■□□□□ 0.84
Pcdh20-201ENSMUST00000061628 Cep164Q5DU05 1446 aa20.25■□□□□ 0.83
Pcdh20-201ENSMUST00000061628 Zbtb7cQ8VCZ7 619 aa20.23■□□□□ 0.83
Pcdh20-201ENSMUST00000061628 Clip1Q922J3 1391 aa20.22■□□□□ 0.83
Pcdh20-201ENSMUST00000061628 Dcaf1Q80TR8 1506 aa20.22■□□□□ 0.83
Pcdh20-201ENSMUST00000061628 Gm13697A2AK42 830 aa20.21■□□□□ 0.83
Pcdh20-201ENSMUST00000061628 Nlrp6Q91WS2 869 aa20.19■□□□□ 0.82
Pcdh20-201ENSMUST00000061628 Erich6D3Z6S9 713 aa20.07■□□□□ 0.8
Pcdh20-201ENSMUST00000061628 DaxxO35613 739 aa20.05■□□□□ 0.8
Pcdh20-201ENSMUST00000061628 Upf2A2AT37 1269 aaKnown RBP20.03■□□□□ 0.8
Pcdh20-201ENSMUST00000061628 Anks4bQ8K3X6 423 aa20.03■□□□□ 0.8
Pcdh20-201ENSMUST00000061628 Atp1b4Q99ME6 356 aa20.01■□□□□ 0.79
Pcdh20-201ENSMUST00000061628 Eid3Q3V124 375 aa19.99■□□□□ 0.79
Pcdh20-201ENSMUST00000061628 Sall2Q9QX96 1004 aa19.95■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Chic1Q8CBW7 227 aa19.94■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Zbtb4Q5F293 982 aa19.94■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Ifnlr1Q8CGK5 535 aa19.93■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Clstn2Q9ER65 966 aa19.91■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Polr3glQ8R0C0 218 aa19.89■□□□□ 0.78
Pcdh20-201ENSMUST00000061628 Gm13695A2AK44 830 aa19.89■□□□□ 0.77
Pcdh20-201ENSMUST00000061628 Aplp2Q06335 707 aa19.89■□□□□ 0.77
Pcdh20-201ENSMUST00000061628 Rb1cc1Q9ESK9 1588 aa19.89■□□□□ 0.77
Pcdh20-201ENSMUST00000061628 Mapk8ip2Q9ERE9 830 aa19.85■□□□□ 0.77
Pcdh20-201ENSMUST00000061628 Fkbp15Q6P9Q6 1216 aaKnown RBP19.82■□□□□ 0.76
Pcdh20-201ENSMUST00000061628 Ubl4bQ9CQ84 188 aa19.82■□□□□ 0.76
Pcdh20-201ENSMUST00000061628 Calr4Q3TQS0 420 aa19.81■□□□□ 0.76
Pcdh20-201ENSMUST00000061628 DiexfQ8BTT6 772 aaKnown RBP19.78■□□□□ 0.76
Pcdh20-201ENSMUST00000061628 Prdm10Q3UTQ7 1184 aa19.77■□□□□ 0.75
Pcdh20-201ENSMUST00000061628 BlmO88700 1416 aa19.76■□□□□ 0.75
Pcdh20-201ENSMUST00000061628 Mrs2Q5NCE8 434 aa19.69■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Ppp4r2Q0VGB7 417 aa19.67■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Csrnp3P59055 597 aa19.67■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Chic2Q9D9G3 165 aa19.67■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Wdr43Q6ZQL4 677 aaKnown RBP19.66■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Setd5Q5XJV7 1441 aa19.66■□□□□ 0.74
Pcdh20-201ENSMUST00000061628 Ccdc9Q8VC31 543 aaKnown RBP19.63■□□□□ 0.73
Pcdh20-201ENSMUST00000061628 NacadQ5SWP3 1504 aa19.6■□□□□ 0.73
Pcdh20-201ENSMUST00000061628 ArxO35085 564 aa19.58■□□□□ 0.73
Pcdh20-201ENSMUST00000061628 Rad21Q61550 635 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 258.6 ms