Protein–RNA interactions for Protein: W4VSP7

Gm3238, MCG61407, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3238W4VSP7 Gm25239-201ENSMUST00000174915 86 ntBASIC30.19■■■□□ 2.42
Gm3238W4VSP7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Gm3238W4VSP7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Gm3238W4VSP7 Gm24109-201ENSMUST00000175489 103 ntBASIC26.59■■□□□ 1.85
Gm3238W4VSP7 Gm15042-201ENSMUST00000120212 883 ntBASIC25.67■■□□□ 1.7
Gm3238W4VSP7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Gm3238W4VSP7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Gm3238W4VSP7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Gm3238W4VSP7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Gm3238W4VSP7 Gm15045-201ENSMUST00000117359 883 ntBASIC25.09■■□□□ 1.61
Gm3238W4VSP7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.08■■□□□ 1.61
Gm3238W4VSP7 Gm23366-201ENSMUST00000175022 89 ntBASIC25.02■■□□□ 1.6
Gm3238W4VSP7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gm3238W4VSP7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm3238W4VSP7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
Gm3238W4VSP7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.74■■□□□ 1.55
Gm3238W4VSP7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3238W4VSP7 Gm25238-201ENSMUST00000174914 89 ntBASIC24.11■■□□□ 1.45
Gm3238W4VSP7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.03■■□□□ 1.44
Gm3238W4VSP7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm3238W4VSP7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm3238W4VSP7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Gm3238W4VSP7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Gm3238W4VSP7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Gm3238W4VSP7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm3238W4VSP7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Gm3238W4VSP7 Gm25262-201ENSMUST00000174934 133 ntBASIC23.36■■□□□ 1.33
Gm3238W4VSP7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Gm3238W4VSP7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Gm3238W4VSP7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm3238W4VSP7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm3238W4VSP7 Gm26115-201ENSMUST00000175605 87 ntBASIC23.08■■□□□ 1.29
Gm3238W4VSP7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.06■■□□□ 1.28
Gm3238W4VSP7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Gm3238W4VSP7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.01■■□□□ 1.27
Gm3238W4VSP7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.96■■□□□ 1.27
Gm3238W4VSP7 Gm8109-201ENSMUST00000194076 746 ntBASIC22.96■■□□□ 1.27
Gm3238W4VSP7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.93■■□□□ 1.26
Gm3238W4VSP7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.91■■□□□ 1.26
Gm3238W4VSP7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Gm3238W4VSP7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Gm3238W4VSP7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Gm3238W4VSP7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Gm3238W4VSP7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Gm3238W4VSP7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm3238W4VSP7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.71■■□□□ 1.23
Gm3238W4VSP7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm3238W4VSP7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm3238W4VSP7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm3238W4VSP7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.51■■□□□ 1.19
Gm3238W4VSP7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.49■■□□□ 1.19
Gm3238W4VSP7 Gm27325-201ENSMUST00000175467 74 ntBASIC22.41■■□□□ 1.18
Gm3238W4VSP7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.39■■□□□ 1.17
Gm3238W4VSP7 Rab21-202ENSMUST00000218831 843 ntBASIC22.34■■□□□ 1.17
Gm3238W4VSP7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Gm3238W4VSP7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3238W4VSP7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.24■■□□□ 1.15
Gm3238W4VSP7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm3238W4VSP7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.12■■□□□ 1.13
Gm3238W4VSP7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3238W4VSP7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3238W4VSP7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Gm3238W4VSP7 Gm24804-201ENSMUST00000174982 85 ntBASIC22.07■■□□□ 1.12
Gm3238W4VSP7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3238W4VSP7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3238W4VSP7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3238W4VSP7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3238W4VSP7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3238W4VSP7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.9■■□□□ 1.1
Gm3238W4VSP7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.85■■□□□ 1.09
Gm3238W4VSP7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.83■■□□□ 1.09
Gm3238W4VSP7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3238W4VSP7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.81■■□□□ 1.08
Gm3238W4VSP7 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.79■■□□□ 1.08
Gm3238W4VSP7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3238W4VSP7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3238W4VSP7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3238W4VSP7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3238W4VSP7 Zfp131-205ENSMUST00000223812 663 ntBASIC21.7■■□□□ 1.06
Gm3238W4VSP7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.69■■□□□ 1.06
Gm3238W4VSP7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.69■■□□□ 1.06
Gm3238W4VSP7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3238W4VSP7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gm3238W4VSP7 Psd-208ENSMUST00000224556 2034 ntBASIC21.63■■□□□ 1.05
Gm3238W4VSP7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gm3238W4VSP7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.61■■□□□ 1.05
Gm3238W4VSP7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Gm3238W4VSP7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Gm3238W4VSP7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.58■■□□□ 1.04
Gm3238W4VSP7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Gm3238W4VSP7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3238W4VSP7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3238W4VSP7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm3238W4VSP7 Gm27322-201ENSMUST00000184007 104 ntBASIC21.49■■□□□ 1.03
Gm3238W4VSP7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm3238W4VSP7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Gm3238W4VSP7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.39■■□□□ 1.01
Gm3238W4VSP7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.38■■□□□ 1.01
Gm3238W4VSP7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3238W4VSP7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 284.2 ms