Protein–RNA interactions for Protein: E9Q876

Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, mousemouse

Predictions only

Length 2,595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca12E9Q876 Gm25239-201ENSMUST00000174915 86 ntBASIC35.11■■■■□ 3.21
Abca12E9Q876 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Abca12E9Q876 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Abca12E9Q876 Gm24109-201ENSMUST00000175489 103 ntBASIC30.86■■■□□ 2.53
Abca12E9Q876 Gm15042-201ENSMUST00000120212 883 ntBASIC29.83■■■□□ 2.37
Abca12E9Q876 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Abca12E9Q876 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Abca12E9Q876 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Abca12E9Q876 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Abca12E9Q876 Gm15045-201ENSMUST00000117359 883 ntBASIC29.16■■■□□ 2.26
Abca12E9Q876 Gm23366-201ENSMUST00000175022 89 ntBASIC28.99■■■□□ 2.23
Abca12E9Q876 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.86■■■□□ 2.21
Abca12E9Q876 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Abca12E9Q876 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.68■■■□□ 2.18
Abca12E9Q876 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.61■■■□□ 2.17
Abca12E9Q876 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Abca12E9Q876 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Abca12E9Q876 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.06■■■□□ 2.08
Abca12E9Q876 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Abca12E9Q876 Gm25238-201ENSMUST00000174914 89 ntBASIC27.94■■■□□ 2.06
Abca12E9Q876 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Abca12E9Q876 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Abca12E9Q876 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Abca12E9Q876 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
Abca12E9Q876 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Abca12E9Q876 Gm25262-201ENSMUST00000174934 133 ntBASIC27.08■■□□□ 1.93
Abca12E9Q876 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.96■■□□□ 1.91
Abca12E9Q876 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.91■■□□□ 1.9
Abca12E9Q876 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Abca12E9Q876 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.7■■□□□ 1.87
Abca12E9Q876 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Abca12E9Q876 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Abca12E9Q876 Gm26115-201ENSMUST00000175605 87 ntBASIC26.6■■□□□ 1.85
Abca12E9Q876 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Abca12E9Q876 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.57■■□□□ 1.84
Abca12E9Q876 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.54■■□□□ 1.84
Abca12E9Q876 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Abca12E9Q876 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Abca12E9Q876 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Abca12E9Q876 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.46■■□□□ 1.83
Abca12E9Q876 Gm8109-201ENSMUST00000194076 746 ntBASIC26.43■■□□□ 1.82
Abca12E9Q876 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Abca12E9Q876 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Abca12E9Q876 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.32■■□□□ 1.8
Abca12E9Q876 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.27■■□□□ 1.8
Abca12E9Q876 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Abca12E9Q876 Gm27325-201ENSMUST00000175467 74 ntBASIC26.22■■□□□ 1.79
Abca12E9Q876 Rab21-202ENSMUST00000218831 843 ntBASIC26.12■■□□□ 1.77
Abca12E9Q876 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Abca12E9Q876 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.05■■□□□ 1.76
Abca12E9Q876 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Abca12E9Q876 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Abca12E9Q876 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.98■■□□□ 1.75
Abca12E9Q876 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Abca12E9Q876 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Abca12E9Q876 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.86■■□□□ 1.73
Abca12E9Q876 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Abca12E9Q876 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Abca12E9Q876 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.78■■□□□ 1.72
Abca12E9Q876 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Abca12E9Q876 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Abca12E9Q876 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Abca12E9Q876 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Abca12E9Q876 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Abca12E9Q876 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Abca12E9Q876 Gm24804-201ENSMUST00000174982 85 ntBASIC25.52■■□□□ 1.68
Abca12E9Q876 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Abca12E9Q876 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.36■■□□□ 1.65
Abca12E9Q876 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Abca12E9Q876 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Abca12E9Q876 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Abca12E9Q876 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.24■■□□□ 1.63
Abca12E9Q876 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.24■■□□□ 1.63
Abca12E9Q876 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Abca12E9Q876 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.21■■□□□ 1.63
Abca12E9Q876 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.19■■□□□ 1.62
Abca12E9Q876 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Abca12E9Q876 Zfp131-205ENSMUST00000223812 663 ntBASIC25.14■■□□□ 1.62
Abca12E9Q876 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Abca12E9Q876 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.12■■□□□ 1.61
Abca12E9Q876 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Abca12E9Q876 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.1■■□□□ 1.61
Abca12E9Q876 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Abca12E9Q876 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Abca12E9Q876 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Abca12E9Q876 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Abca12E9Q876 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Abca12E9Q876 Gm27322-201ENSMUST00000184007 104 ntBASIC25■■□□□ 1.59
Abca12E9Q876 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Abca12E9Q876 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Abca12E9Q876 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Abca12E9Q876 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.96■■□□□ 1.59
Abca12E9Q876 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Abca12E9Q876 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Abca12E9Q876 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Abca12E9Q876 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Abca12E9Q876 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.83■■□□□ 1.56
Abca12E9Q876 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.76■■□□□ 1.55
Abca12E9Q876 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Abca12E9Q876 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms