Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm25239-201ENSMUST00000174915 86 ntBASIC34.1■■■■□ 3.05
Hcfc1Q61191 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Hcfc1Q61191 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Hcfc1Q61191 Gm24109-201ENSMUST00000175489 103 ntBASIC29.78■■■□□ 2.36
Hcfc1Q61191 Gm15042-201ENSMUST00000120212 883 ntBASIC29.52■■■□□ 2.32
Hcfc1Q61191 Gm15045-201ENSMUST00000117359 883 ntBASIC29.03■■■□□ 2.24
Hcfc1Q61191 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Hcfc1Q61191 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Hcfc1Q61191 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Hcfc1Q61191 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Hcfc1Q61191 Gm23366-201ENSMUST00000175022 89 ntBASIC28.38■■■□□ 2.13
Hcfc1Q61191 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.85■■■□□ 2.05
Hcfc1Q61191 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Hcfc1Q61191 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.49■■□□□ 1.99
Hcfc1Q61191 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hcfc1Q61191 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hcfc1Q61191 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.43■■□□□ 1.98
Hcfc1Q61191 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hcfc1Q61191 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Hcfc1Q61191 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Hcfc1Q61191 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Hcfc1Q61191 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hcfc1Q61191 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.03■■□□□ 1.92
Hcfc1Q61191 Gm25238-201ENSMUST00000174914 89 ntBASIC27■■□□□ 1.91
Hcfc1Q61191 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Hcfc1Q61191 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Hcfc1Q61191 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.79■■□□□ 1.88
Hcfc1Q61191 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hcfc1Q61191 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Hcfc1Q61191 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Hcfc1Q61191 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Hcfc1Q61191 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
Hcfc1Q61191 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hcfc1Q61191 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.39■■□□□ 1.82
Hcfc1Q61191 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hcfc1Q61191 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Hcfc1Q61191 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.15■■□□□ 1.78
Hcfc1Q61191 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.11■■□□□ 1.77
Hcfc1Q61191 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Hcfc1Q61191 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hcfc1Q61191 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hcfc1Q61191 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hcfc1Q61191 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.88■■□□□ 1.73
Hcfc1Q61191 Gm27325-201ENSMUST00000175467 74 ntBASIC25.87■■□□□ 1.73
Hcfc1Q61191 Gm25262-201ENSMUST00000174934 133 ntBASIC25.86■■□□□ 1.73
Hcfc1Q61191 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Hcfc1Q61191 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.75■■□□□ 1.71
Hcfc1Q61191 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Hcfc1Q61191 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.58■■□□□ 1.68
Hcfc1Q61191 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.54■■□□□ 1.68
Hcfc1Q61191 Rab21-202ENSMUST00000218831 843 ntBASIC25.48■■□□□ 1.67
Hcfc1Q61191 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hcfc1Q61191 Psd-208ENSMUST00000224556 2034 ntBASIC25.45■■□□□ 1.66
Hcfc1Q61191 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Hcfc1Q61191 Gm26115-201ENSMUST00000175605 87 ntBASIC25.44■■□□□ 1.66
Hcfc1Q61191 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.43■■□□□ 1.66
Hcfc1Q61191 Gm8109-201ENSMUST00000194076 746 ntBASIC25.38■■□□□ 1.65
Hcfc1Q61191 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Hcfc1Q61191 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.36■■□□□ 1.65
Hcfc1Q61191 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Hcfc1Q61191 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Hcfc1Q61191 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.26■■□□□ 1.63
Hcfc1Q61191 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hcfc1Q61191 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.24■■□□□ 1.63
Hcfc1Q61191 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Hcfc1Q61191 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.2■■□□□ 1.63
Hcfc1Q61191 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Hcfc1Q61191 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Hcfc1Q61191 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Hcfc1Q61191 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.09■■□□□ 1.61
Hcfc1Q61191 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Hcfc1Q61191 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.04■■□□□ 1.6
Hcfc1Q61191 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Hcfc1Q61191 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Hcfc1Q61191 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
Hcfc1Q61191 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hcfc1Q61191 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Hcfc1Q61191 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Hcfc1Q61191 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Hcfc1Q61191 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Hcfc1Q61191 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Hcfc1Q61191 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Hcfc1Q61191 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Hcfc1Q61191 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.7■■□□□ 1.54
Hcfc1Q61191 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.68■■□□□ 1.54
Hcfc1Q61191 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hcfc1Q61191 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hcfc1Q61191 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.63■■□□□ 1.53
Hcfc1Q61191 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hcfc1Q61191 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.61■■□□□ 1.53
Hcfc1Q61191 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.59■■□□□ 1.53
Hcfc1Q61191 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Hcfc1Q61191 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Hcfc1Q61191 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.48■■□□□ 1.51
Hcfc1Q61191 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hcfc1Q61191 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hcfc1Q61191 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Hcfc1Q61191 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Hcfc1Q61191 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Hcfc1Q61191 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms