RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Snhg11Q4G0K9 87 aa9.97□□□□□ -0.81
Nup54-201ENSMUST00000038514 A730009L09RikA0A1B0GS82 72 aa9.97□□□□□ -0.81
Nup54-201ENSMUST00000038514 Fam19a3Q7TPG6 132 aa9.97□□□□□ -0.81
Nup54-201ENSMUST00000038514 Gm17577J3QNF7 156 aa9.96□□□□□ -0.81
Nup54-201ENSMUST00000038514 Cox7b2Q9D2H1 82 aa9.96□□□□□ -0.81
Nup54-201ENSMUST00000038514 Ighv13-2A0A0A6YWN3 119 aa9.96□□□□□ -0.82
Nup54-201ENSMUST00000038514 Igkv1-88A0A140T8N1 120 aa9.95□□□□□ -0.82
Nup54-201ENSMUST00000038514 Cd164Q9R0L9 197 aa9.95□□□□□ -0.82
Nup54-201ENSMUST00000038514 Defb37Q7TMD2 62 aa9.94□□□□□ -0.82
Nup54-201ENSMUST00000038514 Setd2E9Q5F9 2537 aa9.94□□□□□ -0.82
Nup54-201ENSMUST00000038514 Igkv8-28A0A0G2JE47 121 aa9.94□□□□□ -0.82
Nup54-201ENSMUST00000038514 TrrapQ80YV3 2565 aaKnown RBP9.94□□□□□ -0.82
Nup54-201ENSMUST00000038514 BC048502Q80Y74 154 aa9.93□□□□□ -0.82
Nup54-201ENSMUST00000038514 BikO70337 150 aa9.92□□□□□ -0.82
Nup54-201ENSMUST00000038514 Gm7276Q3TYW4 209 aa9.9□□□□□ -0.82
Nup54-201ENSMUST00000038514 Fam19a5Q91WE9 132 aa9.9□□□□□ -0.82
Nup54-201ENSMUST00000038514 Trav14-1A0A0G2JF94 121 aa9.89□□□□□ -0.83
Nup54-201ENSMUST00000038514 Vpreb2P13373 142 aa9.89□□□□□ -0.83
Nup54-201ENSMUST00000038514 Cdk2ap2Q9CPY4 127 aa9.89□□□□□ -0.83
Nup54-201ENSMUST00000038514 Sprr4Q8CGN8 76 aa9.89□□□□□ -0.83
Nup54-201ENSMUST00000038514 H2al1aQ5M8Q2 105 aa9.88□□□□□ -0.83
Nup54-201ENSMUST00000038514 Pou2af1Q64693 256 aa9.88□□□□□ -0.83
Nup54-201ENSMUST00000038514 Camk2n2Q78WH7 79 aa9.88□□□□□ -0.83
Nup54-201ENSMUST00000038514 Phxr5P08399 672 aa9.86□□□□□ -0.83
Nup54-201ENSMUST00000038514 Reg3bP35230 175 aa9.86□□□□□ -0.83
Nup54-201ENSMUST00000038514 Brk1Q91VR8 75 aa9.86□□□□□ -0.83
Nup54-201ENSMUST00000038514 SnurfQ9WU12 71 aa9.86□□□□□ -0.83
Nup54-201ENSMUST00000038514 Smim29Q8R043 75 aa9.86□□□□□ -0.83
Nup54-201ENSMUST00000038514 A330070K13RikQ8CA53 115 aa9.85□□□□□ -0.83
Nup54-201ENSMUST00000038514 Gm5617Q91VN2 117 aa9.84□□□□□ -0.83
Nup54-201ENSMUST00000038514 Igkv1-122A0A140T8M9 119 aa9.83□□□□□ -0.84
Nup54-201ENSMUST00000038514 Tex15F8VPN2 2785 aa9.83□□□□□ -0.84
Nup54-201ENSMUST00000038514 Serp1Q9Z1W5 66 aa9.82□□□□□ -0.84
Nup54-201ENSMUST00000038514 Myo18bE9PV66 2605 aa9.82□□□□□ -0.84
Nup54-201ENSMUST00000038514 Sprr2jO70561 109 aa9.81□□□□□ -0.84
Nup54-201ENSMUST00000038514 Smlr1J3QMJ4 66 aa9.8□□□□□ -0.84
Nup54-201ENSMUST00000038514 P06320 134 aa9.8□□□□□ -0.84
Nup54-201ENSMUST00000038514 Igkv3-2A0A075B5P0 119 aa9.79□□□□□ -0.84
Nup54-201ENSMUST00000038514 Nbeal2Q6ZQA0 2742 aa9.79□□□□□ -0.84
Nup54-201ENSMUST00000038514 AplnQ9R0R4 77 aa9.78□□□□□ -0.84
Nup54-201ENSMUST00000038514 Gm11011D3Z3L9 86 aa9.78□□□□□ -0.84
Nup54-201ENSMUST00000038514 Sfta2E9PXB6 77 aa9.78□□□□□ -0.84
Nup54-201ENSMUST00000038514 CicQ924A2 2510 aa9.77□□□□□ -0.85
Nup54-201ENSMUST00000038514 Q8BT88 171 aa9.77□□□□□ -0.85
Nup54-201ENSMUST00000038514 BaalcQ8VHV1 145 aa9.77□□□□□ -0.85
Nup54-201ENSMUST00000038514 PolqQ8CGS6 2544 aa9.76□□□□□ -0.85
Nup54-201ENSMUST00000038514 A0A286YE02 88 aa9.76□□□□□ -0.85
Nup54-201ENSMUST00000038514 Pet100P0DJE0 76 aa9.75□□□□□ -0.85
Nup54-201ENSMUST00000038514 Tenm4Q3UHK6 2771 aa9.75□□□□□ -0.85
Nup54-201ENSMUST00000038514 Cox6a2P43023 97 aa9.75□□□□□ -0.85
Nup54-201ENSMUST00000038514 Defa27F2Z403 93 aa9.74□□□□□ -0.85
Nup54-201ENSMUST00000038514 UqcrqQ9CQ69 82 aa9.74□□□□□ -0.85
Nup54-201ENSMUST00000038514 Fbn1Q61554 2873 aaKnown RBP9.74□□□□□ -0.85
Nup54-201ENSMUST00000038514 Prr15lQ8JZM2 100 aa9.73□□□□□ -0.85
Nup54-201ENSMUST00000038514 Gm10401E9Q3K6 71 aa9.73□□□□□ -0.85
Nup54-201ENSMUST00000038514 P84750 121 aa9.73□□□□□ -0.85
Nup54-201ENSMUST00000038514 Tenm1Q9WTS4 2731 aa9.72□□□□□ -0.85
Nup54-201ENSMUST00000038514 Dmac1Q9CQ00 111 aa9.72□□□□□ -0.85
Nup54-201ENSMUST00000038514 Vpreb1P13372 142 aa9.71□□□□□ -0.85
Nup54-201ENSMUST00000038514 C130032M10RikQ8C888 123 aa9.71□□□□□ -0.85
Nup54-201ENSMUST00000038514 Kmt2aP55200 3966 aa9.7□□□□□ -0.86
Nup54-201ENSMUST00000038514 A930002H24RikQ8C8Y3 163 aa9.7□□□□□ -0.86
Nup54-201ENSMUST00000038514 6430550D23RikE9Q1X6 194 aa9.7□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm10570F6VB42 170 aa9.7□□□□□ -0.86
Nup54-201ENSMUST00000038514 Sprr1aQ62266 144 aa9.7□□□□□ -0.86
Nup54-201ENSMUST00000038514 Dph3Q8K0W9 82 aa9.69□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm11627A6PWP4 55 aa9.68□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm7138L7N2C3 230 aa9.68□□□□□ -0.86
Nup54-201ENSMUST00000038514 Fam168bQ80XQ8 194 aa9.68□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm3238W4VSP7 230 aa9.68□□□□□ -0.86
Nup54-201ENSMUST00000038514 ApcQ61315 2845 aa9.67□□□□□ -0.86
Nup54-201ENSMUST00000038514 Mrpl34Q99N91 92 aa9.67□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm37389A0A0A6YW05 95 aa9.67□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm16181B0V2H2 73 aa9.66□□□□□ -0.86
Nup54-201ENSMUST00000038514 Wfdc6bF6ULY1 148 aa9.66□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm16485Q8C4B7 115 aa9.66□□□□□ -0.86
Nup54-201ENSMUST00000038514 A530084C06RikQ3UTW2 186 aa9.66□□□□□ -0.86
Nup54-201ENSMUST00000038514 Notch2O35516 2470 aa9.65□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm10337F7DEP7 55 aa9.65□□□□□ -0.86
Nup54-201ENSMUST00000038514 PscaP57096 123 aa9.65□□□□□ -0.86
Nup54-201ENSMUST00000038514 Gm37013Q8K491 104 aa9.65□□□□□ -0.86
Nup54-201ENSMUST00000038514 Igkv3-4A0A140T8Q4 119 aa9.65□□□□□ -0.87
Nup54-201ENSMUST00000038514 Dnah3Q8BW94 4083 aa9.64□□□□□ -0.87
Nup54-201ENSMUST00000038514 Gm44790A0A0N4SV91 103 aa9.63□□□□□ -0.87
Nup54-201ENSMUST00000038514 Spink8Q09TK9 105 aa9.63□□□□□ -0.87
Nup54-201ENSMUST00000038514 Vpreb3D3Z6J4 130 aa9.63□□□□□ -0.87
Nup54-201ENSMUST00000038514 Prol1E9PYQ4 312 aa9.63□□□□□ -0.87
Nup54-201ENSMUST00000038514 Igkv8-19A0A0G2JFN8 121 aa9.62□□□□□ -0.87
Nup54-201ENSMUST00000038514 Obox2E9PXV9 151 aa9.6□□□□□ -0.87
Nup54-201ENSMUST00000038514 Defb40Q70KL2 73 aa9.6□□□□□ -0.87
Nup54-201ENSMUST00000038514 Igkv3-12A0A140T8P0 119 aa9.59□□□□□ -0.87
Nup54-201ENSMUST00000038514 Mrpl55Q9CZ83 127 aa9.59□□□□□ -0.87
Nup54-201ENSMUST00000038514 Gm17521F6QAC8 156 aa9.58□□□□□ -0.88
Nup54-201ENSMUST00000038514 Coa6Q8BGD8 79 aa9.57□□□□□ -0.88
Nup54-201ENSMUST00000038514 Itpr2Q9Z329 2701 aa9.57□□□□□ -0.88
Nup54-201ENSMUST00000038514 AtrQ9JKK8 2635 aa9.57□□□□□ -0.88
Nup54-201ENSMUST00000038514 Gm12353A2AGJ4 60 aa9.56□□□□□ -0.88
Nup54-201ENSMUST00000038514 H2al1bA0A087WP11 105 aa9.56□□□□□ -0.88
Nup54-201ENSMUST00000038514 H2al1kJ3QP08 105 aa9.56□□□□□ -0.88
Nup54-201ENSMUST00000038514 H2al1eQ810S6 105 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms