RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gm6040Q4QY32 63 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ighv6-7A0A0A6YWU3 119 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ighv1-12A0A0A6YXJ9 117 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Foxi2Q3I5G5 311 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ptpn13Q64512 2453 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ndufb4Q9CQC7 129 aa11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Tln1P26039 2541 aaKnown RBP11.26□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Col5a1O88207 1838 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Igkv3-3A0A140T8Q0 119 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01794 123 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 1700074P13RikQ9D9G7 251 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm17577J3QNF7 156 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Tm2d1Q99MB3 208 aa11.25□□□□□ -0.61
Col7a1-201ENSMUST00000026740 CrygdP04342 174 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm7257D3YX25 99 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Trav9d-3A0A075B695 113 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Cryba4Q9JJV0 196 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01793 123 aa11.24□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Cox7a1P56392 80 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P01789 122 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Msrb3Q8BU85 253 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gp9O88186 177 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm10762Q9CZN6 115 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Gm14137Q8CE97 175 aa11.23□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Q08AU9 97 aa11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Rnf138Q9CQE0 245 aaKnown RBP11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Ndufs5Q99LY9 106 aa11.22□□□□□ -0.61
Col7a1-201ENSMUST00000026740 P04942 107 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Reg3bP35230 175 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Atox1O08997 68 aaKnown RBP11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Defb18Q30KP5 85 aa11.21□□□□□ -0.61
Col7a1-201ENSMUST00000026740 Trav7-6A0A075B640 112 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01750 117 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Rspo1Q9Z132 265 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Vpreb1P13372 142 aa11.21□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ramp1Q9WTJ5 148 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Prok1Q14A28 105 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 9530003J23RikQ8BM26 151 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01791 123 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Igkv1-88A0A140T8N1 120 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Luzp4B1AV09 449 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 4930470P17RikQ9D542 155 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Vopp1Q8R1C3 172 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 7420426K07RikQ3UX66 186 aa11.2□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15128A2ADW8 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15127B1AVZ5 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15107B1B0X0 449 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm10401E9Q3K6 71 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P04945 108 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav9-2A0A075B647 113 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav9-4A0A0B4J1K2 113 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 NpyP57774 97 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Mapk1ip1lQ8BH93 242 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17455G3UW87 128 aa11.19□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17472A0A075B683 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm28539A0A087WSL9 92 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm15217A2CG07 155 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01753 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Rnf144bQ8BKD6 301 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm19684G3UZ45 117 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Obox8V9GWY9 217 aa11.18□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv3-1A0A075B5S6 116 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Mrpl35Q9CQL6 188 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv1-11A0A0A6YWI9 117 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Trav12d-3A0A075B6A4 115 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Foxs1Q61574 329 aa11.17□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Klk12B2RVZ0 247 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm26602M0QWA4 95 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Hoxb4P10284 250 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Iglc1A0A0G2JE99 106 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01843 105 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ighv1-53A0A075B5W3 117 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 P01748 117 aa11.16□□□□□ -0.62
Col7a1-201ENSMUST00000026740 H2al1mQ9DAD9 105 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Tnfrsf13bQ9ET35 249 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Ebi3O35228 228 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Cfap126Q6P8X9 189 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Defb13Q8R2I4 64 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Gm17521F6QAC8 156 aa11.15□□□□□ -0.62
Col7a1-201ENSMUST00000026740 Defb12Q8K4N3 78 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 CrygcQ61597 174 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 4933414I15RikQ9D4D5 133 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Odf3Q920N1 254 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Setd2E9Q5F9 2537 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Znf706Q9D115 76 aaKnown RBP11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Gm21994F6T2D2 329 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Cd24P24807 76 aa11.14□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Fancd2osQ9D4K4 178 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igkv2-109A0A075B5K6 120 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Ighv10-1A0A0B4J1J6 119 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Trav9n-2A0A0G2JDP3 113 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igf1P05017 153 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Apoc4Q61268 124 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Nxph4G3X9N5 304 aa11.13□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Igkv8-30A0A140T8M3 121 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Rpl39lQ9CQD0 51 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Gphb5Q812B2 130 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 Ighv1-61P01749 117 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 P84750 121 aa11.12□□□□□ -0.63
Col7a1-201ENSMUST00000026740 C920008G01RikA0A0B4J1N1 112 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 95.9 ms