Protein–RNA interactions for Protein: Q8BU85

Msrb3, Methionine-R-sulfoxide reductase B3, mitochondrial, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msrb3Q8BU85 Gm25239-201ENSMUST00000174915 86 ntBASIC28.56■■■□□ 2.16
Msrb3Q8BU85 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Msrb3Q8BU85 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Msrb3Q8BU85 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Msrb3Q8BU85 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Msrb3Q8BU85 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Msrb3Q8BU85 Psd-208ENSMUST00000224556 2034 ntBASIC25.27■■□□□ 1.64
Msrb3Q8BU85 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Msrb3Q8BU85 Gm24109-201ENSMUST00000175489 103 ntBASIC25.01■■□□□ 1.59
Msrb3Q8BU85 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msrb3Q8BU85 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Msrb3Q8BU85 Gm15042-201ENSMUST00000120212 883 ntBASIC24.58■■□□□ 1.53
Msrb3Q8BU85 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msrb3Q8BU85 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Msrb3Q8BU85 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Msrb3Q8BU85 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Msrb3Q8BU85 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Msrb3Q8BU85 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Msrb3Q8BU85 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msrb3Q8BU85 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Msrb3Q8BU85 Gm15045-201ENSMUST00000117359 883 ntBASIC23.87■■□□□ 1.41
Msrb3Q8BU85 Gm23366-201ENSMUST00000175022 89 ntBASIC23.85■■□□□ 1.41
Msrb3Q8BU85 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.81■■□□□ 1.4
Msrb3Q8BU85 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msrb3Q8BU85 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Msrb3Q8BU85 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Msrb3Q8BU85 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Msrb3Q8BU85 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Msrb3Q8BU85 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Msrb3Q8BU85 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.43■■□□□ 1.34
Msrb3Q8BU85 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msrb3Q8BU85 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Msrb3Q8BU85 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msrb3Q8BU85 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Msrb3Q8BU85 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Msrb3Q8BU85 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Msrb3Q8BU85 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Msrb3Q8BU85 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msrb3Q8BU85 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Msrb3Q8BU85 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.13■■□□□ 1.29
Msrb3Q8BU85 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Msrb3Q8BU85 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Msrb3Q8BU85 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.99■■□□□ 1.27
Msrb3Q8BU85 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.98■■□□□ 1.27
Msrb3Q8BU85 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msrb3Q8BU85 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Msrb3Q8BU85 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msrb3Q8BU85 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.91■■□□□ 1.26
Msrb3Q8BU85 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.88■■□□□ 1.25
Msrb3Q8BU85 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msrb3Q8BU85 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.78■■□□□ 1.24
Msrb3Q8BU85 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Msrb3Q8BU85 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Msrb3Q8BU85 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msrb3Q8BU85 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Msrb3Q8BU85 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.67■■□□□ 1.22
Msrb3Q8BU85 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Msrb3Q8BU85 Gm25238-201ENSMUST00000174914 89 ntBASIC22.61■■□□□ 1.21
Msrb3Q8BU85 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Msrb3Q8BU85 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Msrb3Q8BU85 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Msrb3Q8BU85 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Msrb3Q8BU85 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.55■■□□□ 1.2
Msrb3Q8BU85 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Msrb3Q8BU85 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.44■■□□□ 1.18
Msrb3Q8BU85 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Msrb3Q8BU85 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Msrb3Q8BU85 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Msrb3Q8BU85 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Msrb3Q8BU85 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Msrb3Q8BU85 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Msrb3Q8BU85 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Msrb3Q8BU85 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Msrb3Q8BU85 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Msrb3Q8BU85 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Msrb3Q8BU85 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Msrb3Q8BU85 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Msrb3Q8BU85 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Msrb3Q8BU85 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.04■■□□□ 1.12
Msrb3Q8BU85 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Msrb3Q8BU85 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Msrb3Q8BU85 Gm25262-201ENSMUST00000174934 133 ntBASIC21.99■■□□□ 1.11
Msrb3Q8BU85 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msrb3Q8BU85 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msrb3Q8BU85 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.89■■□□□ 1.09
Msrb3Q8BU85 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.85■■□□□ 1.09
Msrb3Q8BU85 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msrb3Q8BU85 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msrb3Q8BU85 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msrb3Q8BU85 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msrb3Q8BU85 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msrb3Q8BU85 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msrb3Q8BU85 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Msrb3Q8BU85 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msrb3Q8BU85 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.67■■□□□ 1.06
Msrb3Q8BU85 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.67■■□□□ 1.06
Msrb3Q8BU85 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msrb3Q8BU85 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.65■■□□□ 1.06
Msrb3Q8BU85 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Msrb3Q8BU85 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms