RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Rhox8Q6VSS7 320 aa24.5■■□□□ 1.51
Col7a1-201ENSMUST00000026740 Rpgrip1Q9EPQ2 1331 aa23.73■■□□□ 1.39
Col7a1-201ENSMUST00000026740 Cngb1E1AZ71 1325 aa23.49■■□□□ 1.35
Col7a1-201ENSMUST00000026740 Pelp1Q9DBD5 1123 aaKnown RBP23.21■■□□□ 1.31
Col7a1-201ENSMUST00000026740 Las1lA2BE28 776 aaKnown RBP23.13■■□□□ 1.29
Col7a1-201ENSMUST00000026740 Wdr66E9Q743 1299 aa22.25■■□□□ 1.15
Col7a1-201ENSMUST00000026740 Rtl1Q7M732 1744 aa22.21■■□□□ 1.15
Col7a1-201ENSMUST00000026740 Ube2uB1AUC4 352 aa22■■□□□ 1.11
Col7a1-201ENSMUST00000026740 Stra8P70278 393 aa21.85■■□□□ 1.09
Col7a1-201ENSMUST00000026740 Esf1Q3V1V3 845 aaKnown RBP21.81■■□□□ 1.08
Col7a1-201ENSMUST00000026740 Amer1Q7TS75 1132 aa21.74■■□□□ 1.07
Col7a1-201ENSMUST00000026740 Ehmt2Q9Z148 1263 aaKnown RBP21.67■■□□□ 1.06
Col7a1-201ENSMUST00000026740 4930567H17RikQ3V0K5 233 aa21.67■■□□□ 1.06
Col7a1-201ENSMUST00000026740 CenpbP27790 599 aa21.65■■□□□ 1.06
Col7a1-201ENSMUST00000026740 Ccdc180J3QNE4 1664 aa21.62■■□□□ 1.05
Col7a1-201ENSMUST00000026740 Zeb1Q64318 1117 aa21.6■■□□□ 1.05
Col7a1-201ENSMUST00000026740 Trim41Q5NCC3 630 aa21.54■■□□□ 1.04
Col7a1-201ENSMUST00000026740 Npm2Q80W85 207 aa21.5■■□□□ 1.03
Col7a1-201ENSMUST00000026740 Ccdc136Q3TVA9 1136 aa21.36■■□□□ 1.01
Col7a1-201ENSMUST00000026740 NefmP08553 848 aa21.31■■□□□ 1
Col7a1-201ENSMUST00000026740 Myt1Q8CFC2 1127 aa21.29■■□□□ 1
Col7a1-201ENSMUST00000026740 NischQ80TM9 1593 aa21.06■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Gab3Q8BSM5 595 aa21.05■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Myt1lP97500 1187 aa21.04■□□□□ 0.96
Col7a1-201ENSMUST00000026740 Anp32bQ9EST5 272 aaKnown RBP21.03■□□□□ 0.96
Col7a1-201ENSMUST00000026740 NeflP08551 543 aa20.96■□□□□ 0.95
Col7a1-201ENSMUST00000026740 Acin1Q9JIX8 1338 aaKnown RBP20.96■□□□□ 0.95
Col7a1-201ENSMUST00000026740 Tnnt3Q9QZ47 272 aa20.91■□□□□ 0.94
Col7a1-201ENSMUST00000026740 4933416C03RikQ3V063 378 aa20.77■□□□□ 0.92
Col7a1-201ENSMUST00000026740 NrdcQ8BHG1 1161 aa20.75■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Rtl5Q5DTT4 599 aa20.74■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Slc24a1Q91WD8 1130 aa20.71■□□□□ 0.91
Col7a1-201ENSMUST00000026740 Cdk11bP24788 784 aaKnown RBP20.66■□□□□ 0.9
Col7a1-201ENSMUST00000026740 UbtfP25976 765 aaKnown RBP20.63■□□□□ 0.89
Col7a1-201ENSMUST00000026740 Ttbk1Q6PCN3 1308 aa20.6■□□□□ 0.89
Col7a1-201ENSMUST00000026740 HrcG5E8J6 738 aa20.41■□□□□ 0.86
Col7a1-201ENSMUST00000026740 NclP09405 707 aaKnown RBP20.34■□□□□ 0.85
Col7a1-201ENSMUST00000026740 Os9Q8K2C7 672 aa20.31■□□□□ 0.84
Col7a1-201ENSMUST00000026740 Nop58Q6DFW4 536 aaKnown RBP20.26■□□□□ 0.83
Col7a1-201ENSMUST00000026740 Fam50aQ9WV03 339 aaKnown RBP20.16■□□□□ 0.82
Col7a1-201ENSMUST00000026740 Eif5bQ05D44 1216 aaKnown RBP20.07■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Hdac5Q9Z2V6 1113 aa20.06■□□□□ 0.8
Col7a1-201ENSMUST00000026740 TonslQ6NZL6 1363 aa20.05■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Neurod1Q60867 357 aa20.02■□□□□ 0.8
Col7a1-201ENSMUST00000026740 Pcgf6Q99NA9 353 aa19.96■□□□□ 0.79
Col7a1-201ENSMUST00000026740 Il27Q8K3I6 234 aa19.94■□□□□ 0.78
Col7a1-201ENSMUST00000026740 Anp32aO35381 247 aa19.85■□□□□ 0.77
Col7a1-201ENSMUST00000026740 Zcchc6Q5BLK4 1491 aaKnown RBP19.81■□□□□ 0.76
Col7a1-201ENSMUST00000026740 DaxxO35613 739 aa19.79■□□□□ 0.76
Col7a1-201ENSMUST00000026740 Ap3b1Q9Z1T1 1105 aa19.68■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Nlrp6Q91WS2 869 aa19.67■□□□□ 0.74
Col7a1-201ENSMUST00000026740 ClspnQ80YR7 1315 aa19.67■□□□□ 0.74
Col7a1-201ENSMUST00000026740 CatipB9EKE5 520 aa19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Ythdc1E9Q5K9 736 aaKnown RBP19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 DiexfQ8BTT6 772 aaKnown RBP19.64■□□□□ 0.74
Col7a1-201ENSMUST00000026740 Gm13697A2AK42 830 aa19.64■□□□□ 0.73
Col7a1-201ENSMUST00000026740 Ccdc9Q8VC31 543 aaKnown RBP19.56■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Upf2A2AT37 1269 aaKnown RBP19.56■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Hsp90aa1P07901 733 aaKnown RBP19.53■□□□□ 0.72
Col7a1-201ENSMUST00000026740 Hnrnpul2Q00PI9 745 aaKnown RBP19.44■□□□□ 0.7
Col7a1-201ENSMUST00000026740 Supt5hO55201 1082 aaKnown RBP19.4■□□□□ 0.7
Col7a1-201ENSMUST00000026740 Ccer2J3QPU5 274 aa19.37■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Npm1Q61937 292 aaKnown RBP19.37■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Gm13695A2AK44 830 aa19.35■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Mier1Q5UAK0 511 aa19.34■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Atp1b4Q99ME6 356 aa19.34■□□□□ 0.69
Col7a1-201ENSMUST00000026740 Polr3glQ8R0C0 218 aa19.31■□□□□ 0.68
Col7a1-201ENSMUST00000026740 Abcc9P70170 1546 aa19.28■□□□□ 0.68
Col7a1-201ENSMUST00000026740 Gm35339A0A140LHH9 1649 aa19.27■□□□□ 0.67
Col7a1-201ENSMUST00000026740 Erich6D3Z6S9 713 aa19.24■□□□□ 0.67
Col7a1-201ENSMUST00000026740 Chic1Q8CBW7 227 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Zbtb7cQ8VCZ7 619 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Trim44Q9QXA7 346 aa19.19■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Brd4Q9ESU6 1400 aaKnown RBP19.17■□□□□ 0.66
Col7a1-201ENSMUST00000026740 Ppargc1bQ8VHJ7 1014 aa19.14■□□□□ 0.65
Col7a1-201ENSMUST00000026740 Adam1bQ8R534 806 aa19.12■□□□□ 0.65
Col7a1-201ENSMUST00000026740 Aplp2Q06335 707 aa19.07■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Znf326O88291 580 aa19.06■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Anks4bQ8K3X6 423 aa19.06■□□□□ 0.64
Col7a1-201ENSMUST00000026740 DekQ7TNV0 380 aaKnown RBP19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Lmod2Q3UHZ5 550 aa19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Clstn2Q9ER65 966 aa19.05■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Plekhg3Q4VAC9 1341 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Calr4Q3TQS0 420 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Dcaf1Q80TR8 1506 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 ArxO35085 564 aa19.04■□□□□ 0.64
Col7a1-201ENSMUST00000026740 Fgd1P52734 960 aa18.97■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Lmod3E9QA62 571 aa18.97■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Clip1Q922J3 1391 aa18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Htatsf1Q8BGC0 757 aa18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Wdr43Q6ZQL4 677 aaKnown RBP18.96■□□□□ 0.63
Col7a1-201ENSMUST00000026740 Cep164Q5DU05 1446 aa18.94■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Ppp4r2Q0VGB7 417 aa18.92■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Chmp4bQ9D8B3 224 aaKnown RBP18.91■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Zbtb4Q5F293 982 aa18.89■□□□□ 0.62
Col7a1-201ENSMUST00000026740 Zfp777B9EKF4 885 aa18.89■□□□□ 0.61
Col7a1-201ENSMUST00000026740 Rb1cc1Q9ESK9 1588 aa18.88■□□□□ 0.61
Col7a1-201ENSMUST00000026740 Prdm10Q3UTQ7 1184 aa18.84■□□□□ 0.61
Col7a1-201ENSMUST00000026740 PnnO35691 725 aaKnown RBP18.83■□□□□ 0.61
Col7a1-201ENSMUST00000026740 PtmaP26350 111 aa18.83■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms