Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
C920008G01RikA0A0B4J1N1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
C920008G01RikA0A0B4J1N1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
C920008G01RikA0A0B4J1N1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
C920008G01RikA0A0B4J1N1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C920008G01RikA0A0B4J1N1 Psd-208ENSMUST00000224556 2034 ntBASIC22.37■■□□□ 1.17
C920008G01RikA0A0B4J1N1 Gm25239-201ENSMUST00000174915 86 ntBASIC22■■□□□ 1.11
C920008G01RikA0A0B4J1N1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
C920008G01RikA0A0B4J1N1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C920008G01RikA0A0B4J1N1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C920008G01RikA0A0B4J1N1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
C920008G01RikA0A0B4J1N1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C920008G01RikA0A0B4J1N1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C920008G01RikA0A0B4J1N1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C920008G01RikA0A0B4J1N1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
C920008G01RikA0A0B4J1N1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C920008G01RikA0A0B4J1N1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C920008G01RikA0A0B4J1N1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C920008G01RikA0A0B4J1N1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C920008G01RikA0A0B4J1N1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C920008G01RikA0A0B4J1N1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
C920008G01RikA0A0B4J1N1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C920008G01RikA0A0B4J1N1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
C920008G01RikA0A0B4J1N1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.38■□□□□ 0.85
C920008G01RikA0A0B4J1N1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
C920008G01RikA0A0B4J1N1 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.33■□□□□ 0.84
C920008G01RikA0A0B4J1N1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.32■□□□□ 0.84
C920008G01RikA0A0B4J1N1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
C920008G01RikA0A0B4J1N1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C920008G01RikA0A0B4J1N1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C920008G01RikA0A0B4J1N1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.22■□□□□ 0.83
C920008G01RikA0A0B4J1N1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C920008G01RikA0A0B4J1N1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C920008G01RikA0A0B4J1N1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C920008G01RikA0A0B4J1N1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C920008G01RikA0A0B4J1N1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
C920008G01RikA0A0B4J1N1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.86■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C920008G01RikA0A0B4J1N1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C920008G01RikA0A0B4J1N1 Gm15042-201ENSMUST00000120212 883 ntBASIC19.71■□□□□ 0.75
C920008G01RikA0A0B4J1N1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
C920008G01RikA0A0B4J1N1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.69■□□□□ 0.74
C920008G01RikA0A0B4J1N1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C920008G01RikA0A0B4J1N1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
C920008G01RikA0A0B4J1N1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.59■□□□□ 0.73
C920008G01RikA0A0B4J1N1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
C920008G01RikA0A0B4J1N1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
C920008G01RikA0A0B4J1N1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
C920008G01RikA0A0B4J1N1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C920008G01RikA0A0B4J1N1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C920008G01RikA0A0B4J1N1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C920008G01RikA0A0B4J1N1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C920008G01RikA0A0B4J1N1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C920008G01RikA0A0B4J1N1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C920008G01RikA0A0B4J1N1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C920008G01RikA0A0B4J1N1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C920008G01RikA0A0B4J1N1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C920008G01RikA0A0B4J1N1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C920008G01RikA0A0B4J1N1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
C920008G01RikA0A0B4J1N1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.33■□□□□ 0.69
C920008G01RikA0A0B4J1N1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
C920008G01RikA0A0B4J1N1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C920008G01RikA0A0B4J1N1 Gm15045-201ENSMUST00000117359 883 ntBASIC19.31■□□□□ 0.68
C920008G01RikA0A0B4J1N1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.25■□□□□ 0.67
C920008G01RikA0A0B4J1N1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C920008G01RikA0A0B4J1N1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C920008G01RikA0A0B4J1N1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
C920008G01RikA0A0B4J1N1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C920008G01RikA0A0B4J1N1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
C920008G01RikA0A0B4J1N1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.2■□□□□ 0.66
C920008G01RikA0A0B4J1N1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C920008G01RikA0A0B4J1N1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.17■□□□□ 0.66
C920008G01RikA0A0B4J1N1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C920008G01RikA0A0B4J1N1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C920008G01RikA0A0B4J1N1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
C920008G01RikA0A0B4J1N1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
C920008G01RikA0A0B4J1N1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C920008G01RikA0A0B4J1N1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.06■□□□□ 0.64
C920008G01RikA0A0B4J1N1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C920008G01RikA0A0B4J1N1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C920008G01RikA0A0B4J1N1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C920008G01RikA0A0B4J1N1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C920008G01RikA0A0B4J1N1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C920008G01RikA0A0B4J1N1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C920008G01RikA0A0B4J1N1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C920008G01RikA0A0B4J1N1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C920008G01RikA0A0B4J1N1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C920008G01RikA0A0B4J1N1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C920008G01RikA0A0B4J1N1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C920008G01RikA0A0B4J1N1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C920008G01RikA0A0B4J1N1 Gm24109-201ENSMUST00000175489 103 ntBASIC18.79■□□□□ 0.6
C920008G01RikA0A0B4J1N1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C920008G01RikA0A0B4J1N1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
C920008G01RikA0A0B4J1N1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
C920008G01RikA0A0B4J1N1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
C920008G01RikA0A0B4J1N1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms