Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Gm25239-201ENSMUST00000174915 86 ntBASIC30.6■■■□□ 2.49
Rnf144bQ8BKD6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rnf144bQ8BKD6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rnf144bQ8BKD6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Rnf144bQ8BKD6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Rnf144bQ8BKD6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Rnf144bQ8BKD6 Psd-208ENSMUST00000224556 2034 ntBASIC27.47■■□□□ 1.99
Rnf144bQ8BKD6 Gm15042-201ENSMUST00000120212 883 ntBASIC27.23■■□□□ 1.95
Rnf144bQ8BKD6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rnf144bQ8BKD6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rnf144bQ8BKD6 Gm15045-201ENSMUST00000117359 883 ntBASIC26.78■■□□□ 1.88
Rnf144bQ8BKD6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rnf144bQ8BKD6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.55■■□□□ 1.84
Rnf144bQ8BKD6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf144bQ8BKD6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rnf144bQ8BKD6 Gm24109-201ENSMUST00000175489 103 ntBASIC26.32■■□□□ 1.8
Rnf144bQ8BKD6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf144bQ8BKD6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rnf144bQ8BKD6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rnf144bQ8BKD6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rnf144bQ8BKD6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rnf144bQ8BKD6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rnf144bQ8BKD6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rnf144bQ8BKD6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rnf144bQ8BKD6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rnf144bQ8BKD6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf144bQ8BKD6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.77■■□□□ 1.72
Rnf144bQ8BKD6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf144bQ8BKD6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf144bQ8BKD6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf144bQ8BKD6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf144bQ8BKD6 Gm23366-201ENSMUST00000175022 89 ntBASIC25.55■■□□□ 1.68
Rnf144bQ8BKD6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.52■■□□□ 1.68
Rnf144bQ8BKD6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf144bQ8BKD6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf144bQ8BKD6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf144bQ8BKD6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf144bQ8BKD6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf144bQ8BKD6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf144bQ8BKD6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf144bQ8BKD6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Rnf144bQ8BKD6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.16■■□□□ 1.62
Rnf144bQ8BKD6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.05■■□□□ 1.6
Rnf144bQ8BKD6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25■■□□□ 1.59
Rnf144bQ8BKD6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Rnf144bQ8BKD6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rnf144bQ8BKD6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rnf144bQ8BKD6 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.94■■□□□ 1.58
Rnf144bQ8BKD6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf144bQ8BKD6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rnf144bQ8BKD6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rnf144bQ8BKD6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf144bQ8BKD6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.69■■□□□ 1.54
Rnf144bQ8BKD6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf144bQ8BKD6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf144bQ8BKD6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf144bQ8BKD6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf144bQ8BKD6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf144bQ8BKD6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.41■■□□□ 1.5
Rnf144bQ8BKD6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf144bQ8BKD6 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.36■■□□□ 1.49
Rnf144bQ8BKD6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.34■■□□□ 1.49
Rnf144bQ8BKD6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf144bQ8BKD6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf144bQ8BKD6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf144bQ8BKD6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf144bQ8BKD6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Rnf144bQ8BKD6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Rnf144bQ8BKD6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rnf144bQ8BKD6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf144bQ8BKD6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
Rnf144bQ8BKD6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf144bQ8BKD6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Rnf144bQ8BKD6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf144bQ8BKD6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf144bQ8BKD6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf144bQ8BKD6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.02■■□□□ 1.44
Rnf144bQ8BKD6 Gm25238-201ENSMUST00000174914 89 ntBASIC24.02■■□□□ 1.44
Rnf144bQ8BKD6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf144bQ8BKD6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf144bQ8BKD6 Gm27325-201ENSMUST00000175467 74 ntBASIC23.97■■□□□ 1.43
Rnf144bQ8BKD6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf144bQ8BKD6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf144bQ8BKD6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf144bQ8BKD6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf144bQ8BKD6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf144bQ8BKD6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf144bQ8BKD6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.78■■□□□ 1.4
Rnf144bQ8BKD6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf144bQ8BKD6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.71■■□□□ 1.39
Rnf144bQ8BKD6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rnf144bQ8BKD6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf144bQ8BKD6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf144bQ8BKD6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Rnf144bQ8BKD6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rnf144bQ8BKD6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf144bQ8BKD6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rnf144bQ8BKD6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rnf144bQ8BKD6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf144bQ8BKD6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms