RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Ighv8-6A0A0A6YXA3 118 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Parm1Q923D3 296 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Q9D8L0 127 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm4744D3Z3S5 154 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 EpopQ7TNS8 369 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Ifi27l2aQ8R412 90 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Mrpl53Q9D1H8 118 aaKnown RBP5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Defa28D3Z1V9 94 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Defa25Q5G864 92 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Cmc4Q61908 68 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Plac1Q9JI83 173 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm29423A0A087WRM1 55 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Igkv6-23A0A140T8N5 115 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 B1ARW8 110 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm10384Q3UQ87 92 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Dmrtc2Q8CGW9 370 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm26938S4R185 226 aa5.48□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Ighv3-8A0A075B5T0 131 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Igkv1-99F6XWB2 120 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P04946 108 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 HrnrQ8VHD8 2496 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Plxna2P70207 1894 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm26727M0QWT1 121 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm10203F6QJ09 66 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Rpl35aO55142 110 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P01726 129 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 H1fxQ80ZM5 188 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Stpg1Q9D2F5 341 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Fxyd7P59648 80 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Hist2h2beQ64524 126 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 MycbQ6P8Z1 170 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Lypd1Q8BLC3 141 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P01811 117 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 H2-DMb1P35737 261 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 SlpiP97430 131 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Thsd7bQ6P4U0 1607 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 A0A1L1SR50 188 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Rpl36aP83882 106 aaKnown RBP5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Gm7489Q3UT34 171 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Znhit3Q9CQK1 151 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 8030423J24RikQ9CX45 142 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P01788 123 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Prr3Q811B5 190 aaKnown RBP5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 BC049762Q8C601 163 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Tusc5Q8C838 173 aa5.47□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Tm4sf19E9Q9H8 206 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P01812 117 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Defa26Q3L180 93 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Trav2Q5R1I9 109 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 GgctQ9D7X8 188 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 Trav9d-1A0A075B699 112 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 P01741 114 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 RtbdnQ8QZY4 247 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 ArtnQ9Z0L2 224 aa5.46□□□□□ -1.53
Scn8a-205ENSMUST00000108910 PolP10400 120 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Trav7-2Q5R1I3 112 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Trav3-1Q5R1I8 114 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Cdkn2aQ64364 169 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Igfbpl1Q80W15 270 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Mgst3Q9CPU4 153 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ighv1-18A0A0A6YXN4 117 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm7075D3Z497 112 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 LtbP41155 306 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Rnf166Q3U9F6 237 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Trav7d-3Q5R1I1 112 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Msrb3Q8BU85 253 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Cxcl14Q9WUQ5 99 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Znrd1Q791N7 123 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Rnf144bQ8BKD6 301 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Pip4p2Q9CZX7 257 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 PifoQ9D9W1 207 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Tcrg-C1A0A075B5Z0 172 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Samd13D3YUG0 102 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Tcrg-C3L7N479 172 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Leap2Q91V13 76 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 3110082J24RikF6Z6Z2 108 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gpx1P11352 201 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ighv1-80A0A075B5Y3 117 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 P01787 123 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 C330021F23RikQ8C7T0 141 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Fxyd1Q9Z239 92 aa5.46□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ly6c1P0CW02 131 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Cox6a1P43024 111 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Pcp4P63054 62 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Igkv14-111A0A140T8P9 117 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Fgf4P11403 202 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ca5aP23589 299 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm28038F7BCN9 126 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 MalO09198 153 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Tcf20Q9EPQ8 1987 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ighv1-69A0A0G2JFS5 117 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 1500009C09RikD3YYW9 81 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm12830F6XVH0 157 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ighv1-62-3P01754 117 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Plekhb2Q9QZC7 221 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Gm10767Q3TQP0 103 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Isg15Q64339 161 aaKnown RBP5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Tmem190Q9D2E9 166 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Hbb-bsA8DUK4 147 aa5.45□□□□□ -1.54
Scn8a-205ENSMUST00000108910 Ear14F6YUX7 155 aa5.45□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms