Protein–RNA interactions for Protein: A0A140T8N5

Igkv6-23, Immunoglobulin kappa variable 6-23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-23A0A140T8N5 Gm25239-201ENSMUST00000174915 86 ntBASIC34.46■■■■□ 3.11
Igkv6-23A0A140T8N5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Igkv6-23A0A140T8N5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Igkv6-23A0A140T8N5 Gm15042-201ENSMUST00000120212 883 ntBASIC30.19■■■□□ 2.42
Igkv6-23A0A140T8N5 Gm24109-201ENSMUST00000175489 103 ntBASIC29.84■■■□□ 2.37
Igkv6-23A0A140T8N5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Igkv6-23A0A140T8N5 Gm15045-201ENSMUST00000117359 883 ntBASIC29.55■■■□□ 2.32
Igkv6-23A0A140T8N5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Igkv6-23A0A140T8N5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Igkv6-23A0A140T8N5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Igkv6-23A0A140T8N5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Igkv6-23A0A140T8N5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
Igkv6-23A0A140T8N5 Gm23366-201ENSMUST00000175022 89 ntBASIC28.8■■■□□ 2.2
Igkv6-23A0A140T8N5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Igkv6-23A0A140T8N5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Igkv6-23A0A140T8N5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Igkv6-23A0A140T8N5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.03■■■□□ 2.08
Igkv6-23A0A140T8N5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Igkv6-23A0A140T8N5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Igkv6-23A0A140T8N5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Igkv6-23A0A140T8N5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.76■■■□□ 2.03
Igkv6-23A0A140T8N5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Igkv6-23A0A140T8N5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Igkv6-23A0A140T8N5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.6■■■□□ 2.01
Igkv6-23A0A140T8N5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Igkv6-23A0A140T8N5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Igkv6-23A0A140T8N5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Igkv6-23A0A140T8N5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
Igkv6-23A0A140T8N5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.46■■□□□ 1.99
Igkv6-23A0A140T8N5 Psd-208ENSMUST00000224556 2034 ntBASIC27.43■■□□□ 1.98
Igkv6-23A0A140T8N5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Igkv6-23A0A140T8N5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Igkv6-23A0A140T8N5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Igkv6-23A0A140T8N5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Igkv6-23A0A140T8N5 Gm25238-201ENSMUST00000174914 89 ntBASIC27.18■■□□□ 1.94
Igkv6-23A0A140T8N5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.17■■□□□ 1.94
Igkv6-23A0A140T8N5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Igkv6-23A0A140T8N5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.97■■□□□ 1.91
Igkv6-23A0A140T8N5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Igkv6-23A0A140T8N5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Igkv6-23A0A140T8N5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
Igkv6-23A0A140T8N5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Igkv6-23A0A140T8N5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Igkv6-23A0A140T8N5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.58■■□□□ 1.85
Igkv6-23A0A140T8N5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.49■■□□□ 1.83
Igkv6-23A0A140T8N5 Gm27325-201ENSMUST00000175467 74 ntBASIC26.48■■□□□ 1.83
Igkv6-23A0A140T8N5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Igkv6-23A0A140T8N5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Igkv6-23A0A140T8N5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Igkv6-23A0A140T8N5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.39■■□□□ 1.82
Igkv6-23A0A140T8N5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Igkv6-23A0A140T8N5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Igkv6-23A0A140T8N5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.24■■□□□ 1.79
Igkv6-23A0A140T8N5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.23■■□□□ 1.79
Igkv6-23A0A140T8N5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Igkv6-23A0A140T8N5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.12■■□□□ 1.77
Igkv6-23A0A140T8N5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Igkv6-23A0A140T8N5 Gm25262-201ENSMUST00000174934 133 ntBASIC26■■□□□ 1.75
Igkv6-23A0A140T8N5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Igkv6-23A0A140T8N5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Igkv6-23A0A140T8N5 Rab21-202ENSMUST00000218831 843 ntBASIC25.96■■□□□ 1.75
Igkv6-23A0A140T8N5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Igkv6-23A0A140T8N5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Igkv6-23A0A140T8N5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Igkv6-23A0A140T8N5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Igkv6-23A0A140T8N5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.86■■□□□ 1.73
Igkv6-23A0A140T8N5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Igkv6-23A0A140T8N5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Igkv6-23A0A140T8N5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Igkv6-23A0A140T8N5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Igkv6-23A0A140T8N5 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.74■■□□□ 1.71
Igkv6-23A0A140T8N5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.73■■□□□ 1.71
Igkv6-23A0A140T8N5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Igkv6-23A0A140T8N5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Igkv6-23A0A140T8N5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Igkv6-23A0A140T8N5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Igkv6-23A0A140T8N5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Igkv6-23A0A140T8N5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Igkv6-23A0A140T8N5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.61■■□□□ 1.69
Igkv6-23A0A140T8N5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Igkv6-23A0A140T8N5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.58■■□□□ 1.69
Igkv6-23A0A140T8N5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv6-23A0A140T8N5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Igkv6-23A0A140T8N5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Igkv6-23A0A140T8N5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.47■■□□□ 1.67
Igkv6-23A0A140T8N5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.47■■□□□ 1.67
Igkv6-23A0A140T8N5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.43■■□□□ 1.66
Igkv6-23A0A140T8N5 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.42■■□□□ 1.66
Igkv6-23A0A140T8N5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Igkv6-23A0A140T8N5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Igkv6-23A0A140T8N5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Igkv6-23A0A140T8N5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Igkv6-23A0A140T8N5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Igkv6-23A0A140T8N5 Gm26115-201ENSMUST00000175605 87 ntBASIC25.32■■□□□ 1.64
Igkv6-23A0A140T8N5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Igkv6-23A0A140T8N5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.25■■□□□ 1.63
Igkv6-23A0A140T8N5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv6-23A0A140T8N5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.23■■□□□ 1.63
Igkv6-23A0A140T8N5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv6-23A0A140T8N5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms