Protein–RNA interactions for Protein: A0A075B5Z0

Tcrg-C1, T cell receptor gamma, constant 1 (Fragment), mousemouse

Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-C1A0A075B5Z0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tcrg-C1A0A075B5Z0 Gm25239-201ENSMUST00000174915 86 ntBASIC24.34■■□□□ 1.49
Tcrg-C1A0A075B5Z0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tcrg-C1A0A075B5Z0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Tcrg-C1A0A075B5Z0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tcrg-C1A0A075B5Z0 Psd-208ENSMUST00000224556 2034 ntBASIC22.76■■□□□ 1.23
Tcrg-C1A0A075B5Z0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Tcrg-C1A0A075B5Z0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tcrg-C1A0A075B5Z0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tcrg-C1A0A075B5Z0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-C1A0A075B5Z0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tcrg-C1A0A075B5Z0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tcrg-C1A0A075B5Z0 Gm15042-201ENSMUST00000120212 883 ntBASIC21.99■■□□□ 1.11
Tcrg-C1A0A075B5Z0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tcrg-C1A0A075B5Z0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tcrg-C1A0A075B5Z0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.77■■□□□ 1.08
Tcrg-C1A0A075B5Z0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tcrg-C1A0A075B5Z0 Gm15045-201ENSMUST00000117359 883 ntBASIC21.54■■□□□ 1.04
Tcrg-C1A0A075B5Z0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tcrg-C1A0A075B5Z0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tcrg-C1A0A075B5Z0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Tcrg-C1A0A075B5Z0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tcrg-C1A0A075B5Z0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tcrg-C1A0A075B5Z0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tcrg-C1A0A075B5Z0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tcrg-C1A0A075B5Z0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-C1A0A075B5Z0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.11■□□□□ 0.97
Tcrg-C1A0A075B5Z0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcrg-C1A0A075B5Z0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcrg-C1A0A075B5Z0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcrg-C1A0A075B5Z0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tcrg-C1A0A075B5Z0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tcrg-C1A0A075B5Z0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.05■□□□□ 0.96
Tcrg-C1A0A075B5Z0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tcrg-C1A0A075B5Z0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tcrg-C1A0A075B5Z0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tcrg-C1A0A075B5Z0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tcrg-C1A0A075B5Z0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tcrg-C1A0A075B5Z0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcrg-C1A0A075B5Z0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcrg-C1A0A075B5Z0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcrg-C1A0A075B5Z0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Tcrg-C1A0A075B5Z0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tcrg-C1A0A075B5Z0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.79■□□□□ 0.92
Tcrg-C1A0A075B5Z0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.74■□□□□ 0.91
Tcrg-C1A0A075B5Z0 Gm24109-201ENSMUST00000175489 103 ntBASIC20.73■□□□□ 0.91
Tcrg-C1A0A075B5Z0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcrg-C1A0A075B5Z0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcrg-C1A0A075B5Z0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcrg-C1A0A075B5Z0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tcrg-C1A0A075B5Z0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tcrg-C1A0A075B5Z0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tcrg-C1A0A075B5Z0 Gm23366-201ENSMUST00000175022 89 ntBASIC20.5■□□□□ 0.87
Tcrg-C1A0A075B5Z0 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.43■□□□□ 0.86
Tcrg-C1A0A075B5Z0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tcrg-C1A0A075B5Z0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcrg-C1A0A075B5Z0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-C1A0A075B5Z0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.33■□□□□ 0.85
Tcrg-C1A0A075B5Z0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tcrg-C1A0A075B5Z0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-C1A0A075B5Z0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-C1A0A075B5Z0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tcrg-C1A0A075B5Z0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-C1A0A075B5Z0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.18■□□□□ 0.82
Tcrg-C1A0A075B5Z0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.16■□□□□ 0.82
Tcrg-C1A0A075B5Z0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tcrg-C1A0A075B5Z0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Tcrg-C1A0A075B5Z0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tcrg-C1A0A075B5Z0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tcrg-C1A0A075B5Z0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tcrg-C1A0A075B5Z0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tcrg-C1A0A075B5Z0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tcrg-C1A0A075B5Z0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tcrg-C1A0A075B5Z0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tcrg-C1A0A075B5Z0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tcrg-C1A0A075B5Z0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Tcrg-C1A0A075B5Z0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Tcrg-C1A0A075B5Z0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tcrg-C1A0A075B5Z0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tcrg-C1A0A075B5Z0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tcrg-C1A0A075B5Z0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tcrg-C1A0A075B5Z0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tcrg-C1A0A075B5Z0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tcrg-C1A0A075B5Z0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Tcrg-C1A0A075B5Z0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tcrg-C1A0A075B5Z0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tcrg-C1A0A075B5Z0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Tcrg-C1A0A075B5Z0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tcrg-C1A0A075B5Z0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tcrg-C1A0A075B5Z0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcrg-C1A0A075B5Z0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcrg-C1A0A075B5Z0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tcrg-C1A0A075B5Z0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tcrg-C1A0A075B5Z0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tcrg-C1A0A075B5Z0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tcrg-C1A0A075B5Z0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tcrg-C1A0A075B5Z0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.56■□□□□ 0.72
Tcrg-C1A0A075B5Z0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.54■□□□□ 0.72
Tcrg-C1A0A075B5Z0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tcrg-C1A0A075B5Z0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms