Protein–RNA interactions for Protein: P10400

Pol, Retrovirus-related Pol polyprotein (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PolP10400 Gm25239-201ENSMUST00000174915 86 ntBASIC25.05■■□□□ 1.6
PolP10400 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PolP10400 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PolP10400 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PolP10400 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PolP10400 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PolP10400 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PolP10400 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PolP10400 Psd-208ENSMUST00000224556 2034 ntBASIC22.41■■□□□ 1.18
PolP10400 Gm15042-201ENSMUST00000120212 883 ntBASIC22.2■■□□□ 1.14
PolP10400 Gm15045-201ENSMUST00000117359 883 ntBASIC21.7■■□□□ 1.06
PolP10400 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PolP10400 Gm24109-201ENSMUST00000175489 103 ntBASIC21.52■■□□□ 1.04
PolP10400 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PolP10400 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PolP10400 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PolP10400 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PolP10400 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PolP10400 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PolP10400 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.22■□□□□ 0.99
PolP10400 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PolP10400 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PolP10400 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PolP10400 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PolP10400 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PolP10400 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PolP10400 Gm23366-201ENSMUST00000175022 89 ntBASIC21■□□□□ 0.95
PolP10400 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PolP10400 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PolP10400 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PolP10400 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PolP10400 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PolP10400 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PolP10400 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PolP10400 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PolP10400 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PolP10400 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PolP10400 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PolP10400 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PolP10400 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PolP10400 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PolP10400 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.63■□□□□ 0.89
PolP10400 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PolP10400 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.54■□□□□ 0.88
PolP10400 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.48■□□□□ 0.87
PolP10400 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PolP10400 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.44■□□□□ 0.86
PolP10400 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.43■□□□□ 0.86
PolP10400 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PolP10400 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PolP10400 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PolP10400 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PolP10400 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PolP10400 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PolP10400 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PolP10400 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PolP10400 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.16■□□□□ 0.82
PolP10400 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PolP10400 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.08■□□□□ 0.8
PolP10400 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PolP10400 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PolP10400 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.93■□□□□ 0.78
PolP10400 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PolP10400 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.84■□□□□ 0.77
PolP10400 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PolP10400 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PolP10400 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PolP10400 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PolP10400 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PolP10400 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PolP10400 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PolP10400 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PolP10400 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PolP10400 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PolP10400 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PolP10400 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PolP10400 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PolP10400 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.66■□□□□ 0.74
PolP10400 Gm25238-201ENSMUST00000174914 89 ntBASIC19.66■□□□□ 0.74
PolP10400 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PolP10400 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PolP10400 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.61■□□□□ 0.73
PolP10400 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PolP10400 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PolP10400 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PolP10400 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PolP10400 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PolP10400 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PolP10400 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PolP10400 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.54■□□□□ 0.72
PolP10400 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PolP10400 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.49■□□□□ 0.71
PolP10400 Gm27325-201ENSMUST00000175467 74 ntBASIC19.49■□□□□ 0.71
PolP10400 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.48■□□□□ 0.71
PolP10400 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PolP10400 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PolP10400 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PolP10400 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PolP10400 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PolP10400 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms