Protein–RNA interactions for Protein: P35737

H2-DMb1, Class II histocompatibility antigen, M beta 1 chain, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMb1P35737 Gm25239-201ENSMUST00000174915 86 ntBASIC28.25■■■□□ 2.11
H2-DMb1P35737 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
H2-DMb1P35737 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
H2-DMb1P35737 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
H2-DMb1P35737 Gm15042-201ENSMUST00000120212 883 ntBASIC24.73■■□□□ 1.55
H2-DMb1P35737 Gm24109-201ENSMUST00000175489 103 ntBASIC24.46■■□□□ 1.51
H2-DMb1P35737 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
H2-DMb1P35737 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
H2-DMb1P35737 Gm15045-201ENSMUST00000117359 883 ntBASIC24.12■■□□□ 1.45
H2-DMb1P35737 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
H2-DMb1P35737 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
H2-DMb1P35737 Psd-208ENSMUST00000224556 2034 ntBASIC23.83■■□□□ 1.41
H2-DMb1P35737 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
H2-DMb1P35737 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
H2-DMb1P35737 Gm23366-201ENSMUST00000175022 89 ntBASIC23.62■■□□□ 1.37
H2-DMb1P35737 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
H2-DMb1P35737 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
H2-DMb1P35737 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H2-DMb1P35737 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H2-DMb1P35737 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.91■■□□□ 1.26
H2-DMb1P35737 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
H2-DMb1P35737 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
H2-DMb1P35737 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.82■■□□□ 1.24
H2-DMb1P35737 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
H2-DMb1P35737 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
H2-DMb1P35737 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
H2-DMb1P35737 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
H2-DMb1P35737 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.67■■□□□ 1.22
H2-DMb1P35737 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2-DMb1P35737 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
H2-DMb1P35737 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
H2-DMb1P35737 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2-DMb1P35737 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2-DMb1P35737 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
H2-DMb1P35737 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
H2-DMb1P35737 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H2-DMb1P35737 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
H2-DMb1P35737 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2-DMb1P35737 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.36■■□□□ 1.17
H2-DMb1P35737 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-DMb1P35737 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-DMb1P35737 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
H2-DMb1P35737 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.3■■□□□ 1.16
H2-DMb1P35737 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-DMb1P35737 Gm25238-201ENSMUST00000174914 89 ntBASIC22.26■■□□□ 1.15
H2-DMb1P35737 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2-DMb1P35737 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
H2-DMb1P35737 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.01■■□□□ 1.11
H2-DMb1P35737 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
H2-DMb1P35737 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
H2-DMb1P35737 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
H2-DMb1P35737 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.77■■□□□ 1.08
H2-DMb1P35737 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H2-DMb1P35737 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H2-DMb1P35737 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2-DMb1P35737 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-DMb1P35737 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H2-DMb1P35737 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.63■■□□□ 1.05
H2-DMb1P35737 Gm27325-201ENSMUST00000175467 74 ntBASIC21.63■■□□□ 1.05
H2-DMb1P35737 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2-DMb1P35737 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.61■■□□□ 1.05
H2-DMb1P35737 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
H2-DMb1P35737 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.57■■□□□ 1.04
H2-DMb1P35737 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.53■■□□□ 1.04
H2-DMb1P35737 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
H2-DMb1P35737 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2-DMb1P35737 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2-DMb1P35737 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.4■■□□□ 1.02
H2-DMb1P35737 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2-DMb1P35737 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.38■■□□□ 1.01
H2-DMb1P35737 Gm25262-201ENSMUST00000174934 133 ntBASIC21.37■■□□□ 1.01
H2-DMb1P35737 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H2-DMb1P35737 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.34■■□□□ 1.01
H2-DMb1P35737 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H2-DMb1P35737 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2-DMb1P35737 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2-DMb1P35737 Rab21-202ENSMUST00000218831 843 ntBASIC21.26■□□□□ 0.99
H2-DMb1P35737 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
H2-DMb1P35737 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2-DMb1P35737 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2-DMb1P35737 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
H2-DMb1P35737 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H2-DMb1P35737 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.2■□□□□ 0.98
H2-DMb1P35737 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
H2-DMb1P35737 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
H2-DMb1P35737 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H2-DMb1P35737 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H2-DMb1P35737 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2-DMb1P35737 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2-DMb1P35737 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
H2-DMb1P35737 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2-DMb1P35737 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.02■□□□□ 0.96
H2-DMb1P35737 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2-DMb1P35737 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2-DMb1P35737 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2-DMb1P35737 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2-DMb1P35737 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.96■□□□□ 0.95
H2-DMb1P35737 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H2-DMb1P35737 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.95■□□□□ 0.94
H2-DMb1P35737 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms