Protein–RNA interactions for Protein: P01811

Ig heavy chain V region UPC10, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01811 Gm25239-201ENSMUST00000174915 86 ntBASIC26.71■■□□□ 1.87
P01811 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
P01811 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
P01811 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
P01811 Gm15042-201ENSMUST00000120212 883 ntBASIC23.55■■□□□ 1.36
P01811 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
P01811 Gm24109-201ENSMUST00000175489 103 ntBASIC23.03■■□□□ 1.28
P01811 Gm15045-201ENSMUST00000117359 883 ntBASIC22.97■■□□□ 1.27
P01811 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
P01811 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
P01811 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
P01811 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
P01811 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
P01811 Gm23366-201ENSMUST00000175022 89 ntBASIC22.42■■□□□ 1.18
P01811 Psd-208ENSMUST00000224556 2034 ntBASIC22.41■■□□□ 1.18
P01811 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
P01811 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
P01811 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
P01811 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22■■□□□ 1.11
P01811 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
P01811 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
P01811 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P01811 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P01811 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
P01811 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01811 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01811 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01811 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.58■■□□□ 1.05
P01811 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01811 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.5■■□□□ 1.03
P01811 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01811 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P01811 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.3■■□□□ 1
P01811 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P01811 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P01811 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
P01811 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01811 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.2■□□□□ 0.98
P01811 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01811 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01811 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.11■□□□□ 0.97
P01811 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P01811 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P01811 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01811 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21■□□□□ 0.95
P01811 Gm25238-201ENSMUST00000174914 89 ntBASIC20.98■□□□□ 0.95
P01811 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01811 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
P01811 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.88■□□□□ 0.93
P01811 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P01811 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P01811 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
P01811 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01811 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.67■□□□□ 0.9
P01811 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
P01811 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P01811 Gm27325-201ENSMUST00000175467 74 ntBASIC20.63■□□□□ 0.89
P01811 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01811 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
P01811 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01811 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01811 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.53■□□□□ 0.88
P01811 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01811 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.5■□□□□ 0.87
P01811 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01811 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.45■□□□□ 0.86
P01811 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.44■□□□□ 0.86
P01811 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P01811 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P01811 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
P01811 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01811 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.36■□□□□ 0.85
P01811 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01811 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.34■□□□□ 0.85
P01811 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P01811 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P01811 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01811 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.28■□□□□ 0.84
P01811 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
P01811 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01811 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01811 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
P01811 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01811 Rab21-202ENSMUST00000218831 843 ntBASIC20.21■□□□□ 0.83
P01811 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01811 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01811 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01811 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01811 Gm25262-201ENSMUST00000174934 133 ntBASIC20.15■□□□□ 0.82
P01811 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01811 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.13■□□□□ 0.81
P01811 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.09■□□□□ 0.81
P01811 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01811 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.07■□□□□ 0.8
P01811 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01811 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P01811 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01811 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01811 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
P01811 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms