RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ADAMTS12P58397 1594 aa25.49■■□□□ 1.67
PHGDH-216ENST00000641375 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
PHGDH-216ENST00000641375 APLP2Q06481 763 aa25.48■■□□□ 1.67
PHGDH-216ENST00000641375 EFCAB5A4FU69 1503 aa25.44■■□□□ 1.66
PHGDH-216ENST00000641375 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
PHGDH-216ENST00000641375 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
PHGDH-216ENST00000641375 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
PHGDH-216ENST00000641375 SAMD9Q5K651 1589 aa25.29■■□□□ 1.64
PHGDH-216ENST00000641375 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
PHGDH-216ENST00000641375 GRIN2AQ12879 1464 aa25.25■■□□□ 1.63
PHGDH-216ENST00000641375 FHOD3Q2V2M9 1422 aa25.25■■□□□ 1.63
PHGDH-216ENST00000641375 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
PHGDH-216ENST00000641375 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
PHGDH-216ENST00000641375 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
PHGDH-216ENST00000641375 FMN1Q68DA7 1419 aa25.22■■□□□ 1.63
PHGDH-216ENST00000641375 HRCP23327 699 aa25.21■■□□□ 1.63
PHGDH-216ENST00000641375 PCF11O94913 1555 aaKnown RBP25.18■■□□□ 1.62
PHGDH-216ENST00000641375 FYCO1Q9BQS8 1478 aa25.18■■□□□ 1.62
PHGDH-216ENST00000641375 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
PHGDH-216ENST00000641375 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
PHGDH-216ENST00000641375 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
PHGDH-216ENST00000641375 CASKIN1Q8WXD9 1431 aa25.16■■□□□ 1.62
PHGDH-216ENST00000641375 UGGT2Q9NYU1 1516 aa25.14■■□□□ 1.61
PHGDH-216ENST00000641375 KANK4Q5T7N3 995 aaPredicted RBP25.13■■□□□ 1.61
PHGDH-216ENST00000641375 CFAP43Q8NDM7 1665 aa25.12■■□□□ 1.61
PHGDH-216ENST00000641375 CEP170Q5SW79 1584 aa25.07■■□□□ 1.6
PHGDH-216ENST00000641375 FBLN2P98095 1184 aa25.05■■□□□ 1.6
PHGDH-216ENST00000641375 NUP160Q12769 1436 aa25.04■■□□□ 1.6
PHGDH-216ENST00000641375 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
PHGDH-216ENST00000641375 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
PHGDH-216ENST00000641375 KIAA0556O60303 1618 aa25■■□□□ 1.59
PHGDH-216ENST00000641375 DISP1Q96F81 1524 aa24.97■■□□□ 1.59
PHGDH-216ENST00000641375 RRBP1Q9P2E9 1410 aaKnown RBP24.95■■□□□ 1.58
PHGDH-216ENST00000641375 HECW1Q76N89 1606 aa24.93■■□□□ 1.58
PHGDH-216ENST00000641375 LRRIQ1Q96JM4 1722 aa24.93■■□□□ 1.58
PHGDH-216ENST00000641375 CCDC18Q5T9S5 1454 aa24.91■■□□□ 1.58
PHGDH-216ENST00000641375 CHD1O14646 1710 aa24.91■■□□□ 1.58
PHGDH-216ENST00000641375 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
PHGDH-216ENST00000641375 CARMIL2Q6F5E8 1435 aa24.88■■□□□ 1.57
PHGDH-216ENST00000641375 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
PHGDH-216ENST00000641375 CCNB3Q8WWL7 1395 aa24.85■■□□□ 1.57
PHGDH-216ENST00000641375 HNRNPUL2Q1KMD3 747 aaKnown RBP24.83■■□□□ 1.57
PHGDH-216ENST00000641375 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
PHGDH-216ENST00000641375 EPRSP07814 1512 aaKnown RBP24.8■■□□□ 1.56
PHGDH-216ENST00000641375 EHBP1L1Q8N3D4 1523 aa24.8■■□□□ 1.56
PHGDH-216ENST00000641375 PHLDB1Q86UU1 1377 aa24.79■■□□□ 1.56
PHGDH-216ENST00000641375 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
PHGDH-216ENST00000641375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.78■■□□□ 1.56
PHGDH-216ENST00000641375 SUPT6HQ7KZ85 1726 aaKnown RBP24.76■■□□□ 1.55
PHGDH-216ENST00000641375 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
PHGDH-216ENST00000641375 NUP153P49790 1475 aaKnown RBP24.7■■□□□ 1.55
PHGDH-216ENST00000641375 CDK13Q14004 1512 aaKnown RBP24.7■■□□□ 1.54
PHGDH-216ENST00000641375 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
PHGDH-216ENST00000641375 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
PHGDH-216ENST00000641375 NCOA2Q15596 1464 aa24.69■■□□□ 1.54
PHGDH-216ENST00000641375 MAGI3Q5TCQ9 1506 aa24.69■■□□□ 1.54
PHGDH-216ENST00000641375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.67■■□□□ 1.54
PHGDH-216ENST00000641375 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
PHGDH-216ENST00000641375 PLB1Q6P1J6 1458 aa24.65■■□□□ 1.54
PHGDH-216ENST00000641375 FGD6Q6ZV73 1430 aa24.64■■□□□ 1.53
PHGDH-216ENST00000641375 MYOM3Q5VTT5 1437 aa24.62■■□□□ 1.53
PHGDH-216ENST00000641375 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
PHGDH-216ENST00000641375 ABCA8O94911 1581 aa24.61■■□□□ 1.53
PHGDH-216ENST00000641375 CLASP1Q7Z460 1538 aa24.6■■□□□ 1.53
PHGDH-216ENST00000641375 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
PHGDH-216ENST00000641375 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
PHGDH-216ENST00000641375 PTPRGP23470 1445 aa24.57■■□□□ 1.52
PHGDH-216ENST00000641375 ITGAEP38570 1179 aa24.56■■□□□ 1.52
PHGDH-216ENST00000641375 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
PHGDH-216ENST00000641375 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
PHGDH-216ENST00000641375 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
PHGDH-216ENST00000641375 ADCY10Q96PN6 1610 aa24.46■■□□□ 1.51
PHGDH-216ENST00000641375 TCOF1Q13428 1488 aaKnown RBP24.45■■□□□ 1.51
PHGDH-216ENST00000641375 ATP10BO94823 1461 aa24.45■■□□□ 1.5
PHGDH-216ENST00000641375 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
PHGDH-216ENST00000641375 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
PHGDH-216ENST00000641375 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
PHGDH-216ENST00000641375 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
PHGDH-216ENST00000641375 PLEKHD1A6NEE1 506 aa24.4■■□□□ 1.5
PHGDH-216ENST00000641375 RAB3GAP2Q9H2M9 1393 aa24.4■■□□□ 1.5
PHGDH-216ENST00000641375 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
PHGDH-216ENST00000641375 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
PHGDH-216ENST00000641375 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
PHGDH-216ENST00000641375 KIF14Q15058 1648 aa24.36■■□□□ 1.49
PHGDH-216ENST00000641375 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
PHGDH-216ENST00000641375 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
PHGDH-216ENST00000641375 HFM1A2PYH4 1435 aa24.29■■□□□ 1.48
PHGDH-216ENST00000641375 UHRF1BP1LA0JNW5 1464 aa24.29■■□□□ 1.48
PHGDH-216ENST00000641375 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
PHGDH-216ENST00000641375 GPATCH8Q9UKJ3 1502 aaKnown RBP24.28■■□□□ 1.48
PHGDH-216ENST00000641375 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
PHGDH-216ENST00000641375 CFDP1Q9UEE9 299 aaPredicted RBP24.25■■□□□ 1.47
PHGDH-216ENST00000641375 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
PHGDH-216ENST00000641375 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
PHGDH-216ENST00000641375 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
PHGDH-216ENST00000641375 NAIPQ13075 1403 aa24.22■■□□□ 1.47
PHGDH-216ENST00000641375 CAMSAP2Q08AD1 1489 aa24.21■■□□□ 1.47
PHGDH-216ENST00000641375 KDM5BQ9UGL1 1544 aa24.2■■□□□ 1.46
PHGDH-216ENST00000641375 DAPK1P53355 1430 aa24.2■■□□□ 1.46
PHGDH-216ENST00000641375 GCC2Q8IWJ2 1684 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms