RNA–Protein interactions for RNA: ENST00000640029.1

KCNMA1-276, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-276ENST00000640029 P3H3Q8IVL6 736 aa15.51■□□□□ 0.07
KCNMA1-276ENST00000640029 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
KCNMA1-276ENST00000640029 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
KCNMA1-276ENST00000640029 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
KCNMA1-276ENST00000640029 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
KCNMA1-276ENST00000640029 WDR62O43379 1518 aa15.48■□□□□ 0.07
KCNMA1-276ENST00000640029 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
KCNMA1-276ENST00000640029 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
KCNMA1-276ENST00000640029 ZNF608Q9ULD9 1512 aaPredicted RBP15.47■□□□□ 0.07
KCNMA1-276ENST00000640029 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
KCNMA1-276ENST00000640029 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
KCNMA1-276ENST00000640029 EFCAB5A4FU69 1503 aa15.41■□□□□ 0.06
KCNMA1-276ENST00000640029 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
KCNMA1-276ENST00000640029 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
KCNMA1-276ENST00000640029 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
KCNMA1-276ENST00000640029 MAP3K1Q13233 1512 aa15.4■□□□□ 0.06
KCNMA1-276ENST00000640029 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
KCNMA1-276ENST00000640029 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
KCNMA1-276ENST00000640029 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
KCNMA1-276ENST00000640029 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
KCNMA1-276ENST00000640029 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
KCNMA1-276ENST00000640029 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
KCNMA1-276ENST00000640029 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
KCNMA1-276ENST00000640029 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
KCNMA1-276ENST00000640029 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
KCNMA1-276ENST00000640029 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
KCNMA1-276ENST00000640029 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
KCNMA1-276ENST00000640029 PHLDB1Q86UU1 1377 aa15.32■□□□□ 0.04
KCNMA1-276ENST00000640029 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
KCNMA1-276ENST00000640029 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
KCNMA1-276ENST00000640029 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
KCNMA1-276ENST00000640029 FMN1Q68DA7 1419 aa15.27■□□□□ 0.04
KCNMA1-276ENST00000640029 ITGAEP38570 1179 aa15.22■□□□□ 0.03
KCNMA1-276ENST00000640029 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
KCNMA1-276ENST00000640029 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
KCNMA1-276ENST00000640029 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.03
KCNMA1-276ENST00000640029 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.02
KCNMA1-276ENST00000640029 DISP1Q96F81 1524 aa15.19■□□□□ 0.02
KCNMA1-276ENST00000640029 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
KCNMA1-276ENST00000640029 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
KCNMA1-276ENST00000640029 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
KCNMA1-276ENST00000640029 KIAA0556O60303 1618 aa15.15■□□□□ 0.02
KCNMA1-276ENST00000640029 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
KCNMA1-276ENST00000640029 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
KCNMA1-276ENST00000640029 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
KCNMA1-276ENST00000640029 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
KCNMA1-276ENST00000640029 FAM50AQ14320 339 aaKnown RBP15.13■□□□□ 0.01
KCNMA1-276ENST00000640029 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
KCNMA1-276ENST00000640029 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
KCNMA1-276ENST00000640029 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
KCNMA1-276ENST00000640029 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
KCNMA1-276ENST00000640029 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
KCNMA1-276ENST00000640029 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
KCNMA1-276ENST00000640029 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
KCNMA1-276ENST00000640029 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
KCNMA1-276ENST00000640029 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
KCNMA1-276ENST00000640029 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
KCNMA1-276ENST00000640029 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
KCNMA1-276ENST00000640029 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
KCNMA1-276ENST00000640029 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
KCNMA1-276ENST00000640029 NUP160Q12769 1436 aa15.08■□□□□ 0
KCNMA1-276ENST00000640029 FBLN2P98095 1184 aa15.08■□□□□ 0
KCNMA1-276ENST00000640029 MAPKBP1O60336 1514 aa15.07■□□□□ 0
KCNMA1-276ENST00000640029 CCDC18Q5T9S5 1454 aa15.07■□□□□ 0
KCNMA1-276ENST00000640029 SETD5Q9C0A6 1442 aa15.06■□□□□ 0
KCNMA1-276ENST00000640029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
KCNMA1-276ENST00000640029 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
KCNMA1-276ENST00000640029 MYOM3Q5VTT5 1437 aa15.05■□□□□ 0
KCNMA1-276ENST00000640029 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
KCNMA1-276ENST00000640029 PTPN23Q9H3S7 1636 aa15.02■□□□□ -0
KCNMA1-276ENST00000640029 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
KCNMA1-276ENST00000640029 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
KCNMA1-276ENST00000640029 JPH4Q96JJ6 628 aa15□□□□□ -0.01
KCNMA1-276ENST00000640029 CHD1O14646 1710 aa14.99□□□□□ -0.01
KCNMA1-276ENST00000640029 ZNF316A6NFI3 1004 aaPredicted RBP14.99□□□□□ -0.01
KCNMA1-276ENST00000640029 TCOF1Q13428 1488 aaKnown RBP14.96□□□□□ -0.01
KCNMA1-276ENST00000640029 DIEXFQ68CQ4 756 aaKnown RBP14.96□□□□□ -0.01
KCNMA1-276ENST00000640029 NAIPQ13075 1403 aa14.93□□□□□ -0.02
KCNMA1-276ENST00000640029 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
KCNMA1-276ENST00000640029 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
KCNMA1-276ENST00000640029 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
KCNMA1-276ENST00000640029 KDM6BO15054 1643 aa14.92□□□□□ -0.02
KCNMA1-276ENST00000640029 KIF14Q15058 1648 aa14.91□□□□□ -0.02
KCNMA1-276ENST00000640029 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
KCNMA1-276ENST00000640029 ABCA8O94911 1581 aa14.91□□□□□ -0.02
KCNMA1-276ENST00000640029 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
KCNMA1-276ENST00000640029 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
KCNMA1-276ENST00000640029 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
KCNMA1-276ENST00000640029 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
KCNMA1-276ENST00000640029 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
KCNMA1-276ENST00000640029 GCC2Q8IWJ2 1684 aa14.86□□□□□ -0.03
KCNMA1-276ENST00000640029 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
KCNMA1-276ENST00000640029 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
KCNMA1-276ENST00000640029 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
KCNMA1-276ENST00000640029 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
KCNMA1-276ENST00000640029 ATP10BO94823 1461 aa14.85□□□□□ -0.03
KCNMA1-276ENST00000640029 DENND4BO75064 1496 aaPredicted RBP14.85□□□□□ -0.03
KCNMA1-276ENST00000640029 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
KCNMA1-276ENST00000640029 DNMT1P26358 1616 aaKnown RBP14.82□□□□□ -0.04
KCNMA1-276ENST00000640029 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms