RNA–Protein interactions for RNA: ENST00000640029.1

KCNMA1-276, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-276ENST00000640029 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
KCNMA1-276ENST00000640029 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
KCNMA1-276ENST00000640029 ZCCHC6Q5VYS8 1495 aaKnown RBP18.86■□□□□ 0.61
KCNMA1-276ENST00000640029 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
KCNMA1-276ENST00000640029 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
KCNMA1-276ENST00000640029 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
KCNMA1-276ENST00000640029 ABCC9O60706 1549 aa18.1■□□□□ 0.49
KCNMA1-276ENST00000640029 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
KCNMA1-276ENST00000640029 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
KCNMA1-276ENST00000640029 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
KCNMA1-276ENST00000640029 NACADO15069 1562 aa17.85■□□□□ 0.45
KCNMA1-276ENST00000640029 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
KCNMA1-276ENST00000640029 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
KCNMA1-276ENST00000640029 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
KCNMA1-276ENST00000640029 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
KCNMA1-276ENST00000640029 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
KCNMA1-276ENST00000640029 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
KCNMA1-276ENST00000640029 WIZO95785 1651 aa17.29■□□□□ 0.36
KCNMA1-276ENST00000640029 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
KCNMA1-276ENST00000640029 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
KCNMA1-276ENST00000640029 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
KCNMA1-276ENST00000640029 SMARCA4P51532 1647 aa17.14■□□□□ 0.34
KCNMA1-276ENST00000640029 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-276ENST00000640029 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-276ENST00000640029 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
KCNMA1-276ENST00000640029 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
KCNMA1-276ENST00000640029 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
KCNMA1-276ENST00000640029 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
KCNMA1-276ENST00000640029 TRIM41Q8WV44 630 aa16.83■□□□□ 0.29
KCNMA1-276ENST00000640029 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
KCNMA1-276ENST00000640029 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
KCNMA1-276ENST00000640029 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
KCNMA1-276ENST00000640029 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-276ENST00000640029 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
KCNMA1-276ENST00000640029 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
KCNMA1-276ENST00000640029 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
KCNMA1-276ENST00000640029 SOGA1O94964 1423 aa16.46■□□□□ 0.23
KCNMA1-276ENST00000640029 SYNJ1O43426 1573 aa16.46■□□□□ 0.23
KCNMA1-276ENST00000640029 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
KCNMA1-276ENST00000640029 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
KCNMA1-276ENST00000640029 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
KCNMA1-276ENST00000640029 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
KCNMA1-276ENST00000640029 CFTRP13569 1480 aa16.27■□□□□ 0.2
KCNMA1-276ENST00000640029 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
KCNMA1-276ENST00000640029 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
KCNMA1-276ENST00000640029 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
KCNMA1-276ENST00000640029 CUX1P39880 1505 aa16.22■□□□□ 0.19
KCNMA1-276ENST00000640029 EEA1Q15075 1411 aa16.22■□□□□ 0.19
KCNMA1-276ENST00000640029 HRCP23327 699 aa16.21■□□□□ 0.19
KCNMA1-276ENST00000640029 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
KCNMA1-276ENST00000640029 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
KCNMA1-276ENST00000640029 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
KCNMA1-276ENST00000640029 CEP162Q5TB80 1403 aa16.14■□□□□ 0.17
KCNMA1-276ENST00000640029 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
KCNMA1-276ENST00000640029 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-276ENST00000640029 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
KCNMA1-276ENST00000640029 KIF21BO75037 1637 aa16.11■□□□□ 0.17
KCNMA1-276ENST00000640029 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
KCNMA1-276ENST00000640029 GOLGA3Q08378 1498 aa16.11■□□□□ 0.17
KCNMA1-276ENST00000640029 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
KCNMA1-276ENST00000640029 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
KCNMA1-276ENST00000640029 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-276ENST00000640029 NESP48681 1621 aa16.06■□□□□ 0.16
KCNMA1-276ENST00000640029 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
KCNMA1-276ENST00000640029 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
KCNMA1-276ENST00000640029 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
KCNMA1-276ENST00000640029 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
KCNMA1-276ENST00000640029 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
KCNMA1-276ENST00000640029 CLIP1P30622 1438 aa15.9■□□□□ 0.14
KCNMA1-276ENST00000640029 CUX2O14529 1486 aa15.89■□□□□ 0.13
KCNMA1-276ENST00000640029 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
KCNMA1-276ENST00000640029 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
KCNMA1-276ENST00000640029 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
KCNMA1-276ENST00000640029 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
KCNMA1-276ENST00000640029 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
KCNMA1-276ENST00000640029 IGF1RP08069 1367 aa15.85■□□□□ 0.13
KCNMA1-276ENST00000640029 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
KCNMA1-276ENST00000640029 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
KCNMA1-276ENST00000640029 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
KCNMA1-276ENST00000640029 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
KCNMA1-276ENST00000640029 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
KCNMA1-276ENST00000640029 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
KCNMA1-276ENST00000640029 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
KCNMA1-276ENST00000640029 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
KCNMA1-276ENST00000640029 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
KCNMA1-276ENST00000640029 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.11
KCNMA1-276ENST00000640029 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
KCNMA1-276ENST00000640029 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
KCNMA1-276ENST00000640029 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
KCNMA1-276ENST00000640029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
KCNMA1-276ENST00000640029 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
KCNMA1-276ENST00000640029 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
KCNMA1-276ENST00000640029 MYT1Q01538 1121 aa15.61■□□□□ 0.09
KCNMA1-276ENST00000640029 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
KCNMA1-276ENST00000640029 CUL7Q14999 1698 aa15.6■□□□□ 0.09
KCNMA1-276ENST00000640029 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
KCNMA1-276ENST00000640029 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
KCNMA1-276ENST00000640029 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
KCNMA1-276ENST00000640029 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
KCNMA1-276ENST00000640029 APLP2Q06481 763 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms