RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 FBLN2P98095 1184 aa24.2■■□□□ 1.46
SPIN3-219ENST00000639053 CTTNBP2Q8WZ74 1663 aa24.19■■□□□ 1.46
SPIN3-219ENST00000639053 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
SPIN3-219ENST00000639053 CHD1O14646 1710 aa24.09■■□□□ 1.45
SPIN3-219ENST00000639053 NUP160Q12769 1436 aa24.07■■□□□ 1.44
SPIN3-219ENST00000639053 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
SPIN3-219ENST00000639053 IQGAP2Q13576 1575 aa24.06■■□□□ 1.44
SPIN3-219ENST00000639053 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
SPIN3-219ENST00000639053 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
SPIN3-219ENST00000639053 P3H3Q8IVL6 736 aa23.97■■□□□ 1.43
SPIN3-219ENST00000639053 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
SPIN3-219ENST00000639053 SAMD9Q5K651 1589 aa23.94■■□□□ 1.42
SPIN3-219ENST00000639053 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
SPIN3-219ENST00000639053 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
SPIN3-219ENST00000639053 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
SPIN3-219ENST00000639053 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
SPIN3-219ENST00000639053 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
SPIN3-219ENST00000639053 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
SPIN3-219ENST00000639053 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
SPIN3-219ENST00000639053 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
SPIN3-219ENST00000639053 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
SPIN3-219ENST00000639053 CARMIL2Q6F5E8 1435 aa23.75■■□□□ 1.39
SPIN3-219ENST00000639053 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
SPIN3-219ENST00000639053 FMN1Q68DA7 1419 aa23.75■■□□□ 1.39
SPIN3-219ENST00000639053 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
SPIN3-219ENST00000639053 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
SPIN3-219ENST00000639053 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
SPIN3-219ENST00000639053 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
SPIN3-219ENST00000639053 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
SPIN3-219ENST00000639053 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
SPIN3-219ENST00000639053 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
SPIN3-219ENST00000639053 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
SPIN3-219ENST00000639053 APLP2Q06481 763 aa23.66■■□□□ 1.38
SPIN3-219ENST00000639053 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
SPIN3-219ENST00000639053 PTPRGP23470 1445 aa23.57■■□□□ 1.36
SPIN3-219ENST00000639053 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
SPIN3-219ENST00000639053 HRCP23327 699 aa23.56■■□□□ 1.36
SPIN3-219ENST00000639053 PLB1Q6P1J6 1458 aa23.55■■□□□ 1.36
SPIN3-219ENST00000639053 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
SPIN3-219ENST00000639053 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
SPIN3-219ENST00000639053 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
SPIN3-219ENST00000639053 RAPGEF6Q8TEU7 1601 aa23.54■■□□□ 1.36
SPIN3-219ENST00000639053 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
SPIN3-219ENST00000639053 CFAP43Q8NDM7 1665 aa23.52■■□□□ 1.36
SPIN3-219ENST00000639053 ABCA8O94911 1581 aa23.5■■□□□ 1.35
SPIN3-219ENST00000639053 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
SPIN3-219ENST00000639053 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
SPIN3-219ENST00000639053 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
SPIN3-219ENST00000639053 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
SPIN3-219ENST00000639053 CDK13Q14004 1512 aaKnown RBP23.46■■□□□ 1.35
SPIN3-219ENST00000639053 LRRC9Q6ZRR7 1453 aa23.45■■□□□ 1.34
SPIN3-219ENST00000639053 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
SPIN3-219ENST00000639053 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
SPIN3-219ENST00000639053 MTUS2Q5JR59 1369 aa23.37■■□□□ 1.33
SPIN3-219ENST00000639053 ABCC2Q92887 1545 aa23.36■■□□□ 1.33
SPIN3-219ENST00000639053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
SPIN3-219ENST00000639053 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
SPIN3-219ENST00000639053 ATP10BO94823 1461 aa23.35■■□□□ 1.33
SPIN3-219ENST00000639053 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
SPIN3-219ENST00000639053 EHBP1L1Q8N3D4 1523 aa23.32■■□□□ 1.32
SPIN3-219ENST00000639053 UHRF1BP1LA0JNW5 1464 aa23.32■■□□□ 1.32
SPIN3-219ENST00000639053 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
SPIN3-219ENST00000639053 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
SPIN3-219ENST00000639053 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
SPIN3-219ENST00000639053 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
SPIN3-219ENST00000639053 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
SPIN3-219ENST00000639053 PHLDB1Q86UU1 1377 aa23.25■■□□□ 1.31
SPIN3-219ENST00000639053 NCOA2Q15596 1464 aa23.23■■□□□ 1.31
SPIN3-219ENST00000639053 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
SPIN3-219ENST00000639053 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
SPIN3-219ENST00000639053 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
SPIN3-219ENST00000639053 ZCCHC11Q5TAX3 1644 aaKnown RBP23.21■■□□□ 1.31
SPIN3-219ENST00000639053 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
SPIN3-219ENST00000639053 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
SPIN3-219ENST00000639053 CYB5RLQ6IPT4 315 aa23.14■■□□□ 1.3
SPIN3-219ENST00000639053 KIF14Q15058 1648 aa23.14■■□□□ 1.3
SPIN3-219ENST00000639053 ZEB1P37275 1124 aaPredicted RBP23.12■■□□□ 1.29
SPIN3-219ENST00000639053 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
SPIN3-219ENST00000639053 MYOM3Q5VTT5 1437 aa23.11■■□□□ 1.29
SPIN3-219ENST00000639053 FGD6Q6ZV73 1430 aa23.09■■□□□ 1.29
SPIN3-219ENST00000639053 NPM1P06748 294 aaKnown RBP eCLIP23.06■■□□□ 1.28
SPIN3-219ENST00000639053 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
SPIN3-219ENST00000639053 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
SPIN3-219ENST00000639053 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
SPIN3-219ENST00000639053 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
SPIN3-219ENST00000639053 ASXL2Q76L83 1435 aa23.02■■□□□ 1.27
SPIN3-219ENST00000639053 GPATCH8Q9UKJ3 1502 aaKnown RBP23.01■■□□□ 1.27
SPIN3-219ENST00000639053 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
SPIN3-219ENST00000639053 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
SPIN3-219ENST00000639053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
SPIN3-219ENST00000639053 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
SPIN3-219ENST00000639053 ITSN2Q9NZM3 1697 aa22.96■■□□□ 1.27
SPIN3-219ENST00000639053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.27
SPIN3-219ENST00000639053 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
SPIN3-219ENST00000639053 TCOF1Q13428 1488 aaKnown RBP22.96■■□□□ 1.27
SPIN3-219ENST00000639053 ITGAEP38570 1179 aa22.95■■□□□ 1.26
SPIN3-219ENST00000639053 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
SPIN3-219ENST00000639053 ZNF644Q9H582 1327 aaPredicted RBP22.91■■□□□ 1.26
SPIN3-219ENST00000639053 PREX2Q70Z35 1606 aa22.89■■□□□ 1.26
SPIN3-219ENST00000639053 MAPKBP1O60336 1514 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms