RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
SPIN3-219ENST00000639053 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.5
SPIN3-219ENST00000639053 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
SPIN3-219ENST00000639053 ABCC9O60706 1549 aa29.36■■■□□ 2.29
SPIN3-219ENST00000639053 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
SPIN3-219ENST00000639053 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
SPIN3-219ENST00000639053 MYO15BQ96JP2 1530 aa28.73■■■□□ 2.19
SPIN3-219ENST00000639053 NACADO15069 1562 aa28.67■■■□□ 2.18
SPIN3-219ENST00000639053 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
SPIN3-219ENST00000639053 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
SPIN3-219ENST00000639053 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
SPIN3-219ENST00000639053 UNC13AQ9UPW8 1703 aa27.91■■■□□ 2.06
SPIN3-219ENST00000639053 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
SPIN3-219ENST00000639053 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
SPIN3-219ENST00000639053 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
SPIN3-219ENST00000639053 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
SPIN3-219ENST00000639053 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
SPIN3-219ENST00000639053 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
SPIN3-219ENST00000639053 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
SPIN3-219ENST00000639053 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SPIN3-219ENST00000639053 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
SPIN3-219ENST00000639053 WIZO95785 1651 aa26.84■■□□□ 1.89
SPIN3-219ENST00000639053 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
SPIN3-219ENST00000639053 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
SPIN3-219ENST00000639053 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
SPIN3-219ENST00000639053 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
SPIN3-219ENST00000639053 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
SPIN3-219ENST00000639053 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
SPIN3-219ENST00000639053 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
SPIN3-219ENST00000639053 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
SPIN3-219ENST00000639053 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
SPIN3-219ENST00000639053 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
SPIN3-219ENST00000639053 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
SPIN3-219ENST00000639053 CFTRP13569 1480 aa25.79■■□□□ 1.72
SPIN3-219ENST00000639053 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
SPIN3-219ENST00000639053 NESP48681 1621 aa25.68■■□□□ 1.7
SPIN3-219ENST00000639053 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
SPIN3-219ENST00000639053 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
SPIN3-219ENST00000639053 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
SPIN3-219ENST00000639053 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
SPIN3-219ENST00000639053 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
SPIN3-219ENST00000639053 WRNQ14191 1432 aaPredicted RBP eCLIP25.49■■□□□ 1.67
SPIN3-219ENST00000639053 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
SPIN3-219ENST00000639053 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
SPIN3-219ENST00000639053 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
SPIN3-219ENST00000639053 CUX1P39880 1505 aa25.34■■□□□ 1.65
SPIN3-219ENST00000639053 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
SPIN3-219ENST00000639053 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
SPIN3-219ENST00000639053 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
SPIN3-219ENST00000639053 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
SPIN3-219ENST00000639053 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
SPIN3-219ENST00000639053 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
SPIN3-219ENST00000639053 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
SPIN3-219ENST00000639053 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.62
SPIN3-219ENST00000639053 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
SPIN3-219ENST00000639053 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
SPIN3-219ENST00000639053 SOGA1O94964 1423 aa25.09■■□□□ 1.61
SPIN3-219ENST00000639053 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
SPIN3-219ENST00000639053 RUSC2Q8N2Y8 1516 aa25.03■■□□□ 1.6
SPIN3-219ENST00000639053 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
SPIN3-219ENST00000639053 WDR62O43379 1518 aa25.01■■□□□ 1.59
SPIN3-219ENST00000639053 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
SPIN3-219ENST00000639053 EEA1Q15075 1411 aa24.94■■□□□ 1.58
SPIN3-219ENST00000639053 CUX2O14529 1486 aa24.89■■□□□ 1.58
SPIN3-219ENST00000639053 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
SPIN3-219ENST00000639053 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
SPIN3-219ENST00000639053 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
SPIN3-219ENST00000639053 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
SPIN3-219ENST00000639053 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
SPIN3-219ENST00000639053 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
SPIN3-219ENST00000639053 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
SPIN3-219ENST00000639053 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
SPIN3-219ENST00000639053 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
SPIN3-219ENST00000639053 IGF1RP08069 1367 aa24.7■■□□□ 1.54
SPIN3-219ENST00000639053 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
SPIN3-219ENST00000639053 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
SPIN3-219ENST00000639053 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
SPIN3-219ENST00000639053 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
SPIN3-219ENST00000639053 KIF21BO75037 1637 aa24.64■■□□□ 1.54
SPIN3-219ENST00000639053 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
SPIN3-219ENST00000639053 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
SPIN3-219ENST00000639053 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
SPIN3-219ENST00000639053 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
SPIN3-219ENST00000639053 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
SPIN3-219ENST00000639053 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
SPIN3-219ENST00000639053 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
SPIN3-219ENST00000639053 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
SPIN3-219ENST00000639053 CUL7Q14999 1698 aa24.51■■□□□ 1.51
SPIN3-219ENST00000639053 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
SPIN3-219ENST00000639053 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
SPIN3-219ENST00000639053 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
SPIN3-219ENST00000639053 ADAMTS12P58397 1594 aa24.41■■□□□ 1.5
SPIN3-219ENST00000639053 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
SPIN3-219ENST00000639053 MAGI1Q96QZ7 1491 aaPredicted RBP24.34■■□□□ 1.49
SPIN3-219ENST00000639053 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
SPIN3-219ENST00000639053 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
SPIN3-219ENST00000639053 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
SPIN3-219ENST00000639053 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
SPIN3-219ENST00000639053 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
SPIN3-219ENST00000639053 CLIP1P30622 1438 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms