RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
PAX6-236ENST00000638685 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
PAX6-236ENST00000638685 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
PAX6-236ENST00000638685 APLP2Q06481 763 aa15.75■□□□□ 0.11
PAX6-236ENST00000638685 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
PAX6-236ENST00000638685 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
PAX6-236ENST00000638685 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
PAX6-236ENST00000638685 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.1
PAX6-236ENST00000638685 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
PAX6-236ENST00000638685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
PAX6-236ENST00000638685 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
PAX6-236ENST00000638685 EFCAB5A4FU69 1503 aa15.66■□□□□ 0.1
PAX6-236ENST00000638685 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
PAX6-236ENST00000638685 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
PAX6-236ENST00000638685 CCER1Q8TC90 406 aaPredicted RBP15.64■□□□□ 0.09
PAX6-236ENST00000638685 TIAM1Q13009 1591 aa15.63■□□□□ 0.09
PAX6-236ENST00000638685 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
PAX6-236ENST00000638685 ATP1B4Q9UN42 357 aaPredicted RBP15.6■□□□□ 0.09
PAX6-236ENST00000638685 IQGAP2Q13576 1575 aa15.58■□□□□ 0.09
PAX6-236ENST00000638685 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
PAX6-236ENST00000638685 MAP3K1Q13233 1512 aa15.56■□□□□ 0.08
PAX6-236ENST00000638685 CFAP43Q8NDM7 1665 aa15.56■□□□□ 0.08
PAX6-236ENST00000638685 GRIN2AQ12879 1464 aa15.56■□□□□ 0.08
PAX6-236ENST00000638685 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
PAX6-236ENST00000638685 CASKIN1Q8WXD9 1431 aa15.56■□□□□ 0.08
PAX6-236ENST00000638685 FYCO1Q9BQS8 1478 aa15.55■□□□□ 0.08
PAX6-236ENST00000638685 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
PAX6-236ENST00000638685 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
PAX6-236ENST00000638685 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.07
PAX6-236ENST00000638685 FBLN2P98095 1184 aa15.51■□□□□ 0.07
PAX6-236ENST00000638685 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
PAX6-236ENST00000638685 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
PAX6-236ENST00000638685 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
PAX6-236ENST00000638685 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
PAX6-236ENST00000638685 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
PAX6-236ENST00000638685 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
PAX6-236ENST00000638685 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
PAX6-236ENST00000638685 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
PAX6-236ENST00000638685 KIAA0556O60303 1618 aa15.44■□□□□ 0.06
PAX6-236ENST00000638685 NUP160Q12769 1436 aa15.42■□□□□ 0.06
PAX6-236ENST00000638685 ITGAEP38570 1179 aa15.42■□□□□ 0.06
PAX6-236ENST00000638685 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
PAX6-236ENST00000638685 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
PAX6-236ENST00000638685 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
PAX6-236ENST00000638685 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
PAX6-236ENST00000638685 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
PAX6-236ENST00000638685 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
PAX6-236ENST00000638685 CHD1O14646 1710 aa15.36■□□□□ 0.05
PAX6-236ENST00000638685 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
PAX6-236ENST00000638685 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
PAX6-236ENST00000638685 NCOA2Q15596 1464 aa15.33■□□□□ 0.04
PAX6-236ENST00000638685 NUP153P49790 1475 aaKnown RBP15.32■□□□□ 0.04
PAX6-236ENST00000638685 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
PAX6-236ENST00000638685 EHBP1L1Q8N3D4 1523 aa15.31■□□□□ 0.04
PAX6-236ENST00000638685 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
PAX6-236ENST00000638685 SUPT6HQ7KZ85 1726 aaKnown RBP15.3■□□□□ 0.04
PAX6-236ENST00000638685 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
PAX6-236ENST00000638685 RAPGEF6Q8TEU7 1601 aa15.3■□□□□ 0.04
PAX6-236ENST00000638685 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
PAX6-236ENST00000638685 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
PAX6-236ENST00000638685 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
PAX6-236ENST00000638685 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
PAX6-236ENST00000638685 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
PAX6-236ENST00000638685 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
PAX6-236ENST00000638685 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
PAX6-236ENST00000638685 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
PAX6-236ENST00000638685 CLSPNQ9HAW4 1339 aa15.23■□□□□ 0.03
PAX6-236ENST00000638685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
PAX6-236ENST00000638685 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
PAX6-236ENST00000638685 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.02
PAX6-236ENST00000638685 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
PAX6-236ENST00000638685 SETD5Q9C0A6 1442 aa15.2■□□□□ 0.02
PAX6-236ENST00000638685 ABCA8O94911 1581 aa15.19■□□□□ 0.02
PAX6-236ENST00000638685 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
PAX6-236ENST00000638685 KIF14Q15058 1648 aa15.15■□□□□ 0.02
PAX6-236ENST00000638685 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
PAX6-236ENST00000638685 MAPKBP1O60336 1514 aa15.14■□□□□ 0.01
PAX6-236ENST00000638685 ATP10BO94823 1461 aa15.14■□□□□ 0.01
PAX6-236ENST00000638685 PTPRGP23470 1445 aa15.14■□□□□ 0.01
PAX6-236ENST00000638685 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
PAX6-236ENST00000638685 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
PAX6-236ENST00000638685 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
PAX6-236ENST00000638685 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
PAX6-236ENST00000638685 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
PAX6-236ENST00000638685 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
PAX6-236ENST00000638685 NAIPQ13075 1403 aa15.09■□□□□ 0.01
PAX6-236ENST00000638685 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
PAX6-236ENST00000638685 ADCY10Q96PN6 1610 aa15.08■□□□□ 0
PAX6-236ENST00000638685 RRP7BPQ9NSQ0 103 aa15.07■□□□□ 0
PAX6-236ENST00000638685 GPATCH8Q9UKJ3 1502 aaKnown RBP15.06■□□□□ 0
PAX6-236ENST00000638685 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
PAX6-236ENST00000638685 KDM6BO15054 1643 aa15.05■□□□□ 0
PAX6-236ENST00000638685 UACAQ9BZF9 1416 aa15.04■□□□□ -0
PAX6-236ENST00000638685 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
PAX6-236ENST00000638685 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
PAX6-236ENST00000638685 SIN3AQ96ST3 1273 aa15.03■□□□□ -0
PAX6-236ENST00000638685 ABCC10Q5T3U5 1492 aa15.03■□□□□ -0
PAX6-236ENST00000638685 ACIN1Q9UKV3 1341 aaKnown RBP15.02■□□□□ -0
PAX6-236ENST00000638685 ABCC5O15440 1437 aa15.02■□□□□ -0
PAX6-236ENST00000638685 DAPK1P53355 1430 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms