RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 ADAMTS12P58397 1594 aa33.92■■■■□ 3.02
SCARB2-212ENST00000638663 CTTNBP2Q8WZ74 1663 aa33.89■■■■□ 3.02
SCARB2-212ENST00000638663 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
SCARB2-212ENST00000638663 TTBK1Q5TCY1 1321 aaPredicted RBP33.75■■■□□ 2.99
SCARB2-212ENST00000638663 MAGI1Q96QZ7 1491 aaPredicted RBP33.72■■■□□ 2.99
SCARB2-212ENST00000638663 APLP2Q06481 763 aa33.71■■■□□ 2.99
SCARB2-212ENST00000638663 P3H3Q8IVL6 736 aa33.69■■■□□ 2.98
SCARB2-212ENST00000638663 EFCAB5A4FU69 1503 aa33.68■■■□□ 2.98
SCARB2-212ENST00000638663 GRIN2AQ12879 1464 aa33.63■■■□□ 2.97
SCARB2-212ENST00000638663 FHOD3Q2V2M9 1422 aa33.61■■■□□ 2.97
SCARB2-212ENST00000638663 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
SCARB2-212ENST00000638663 CHMP7Q8WUX9 453 aaPredicted RBP33.59■■■□□ 2.97
SCARB2-212ENST00000638663 IQGAP2Q13576 1575 aa33.58■■■□□ 2.97
SCARB2-212ENST00000638663 SAMD9Q5K651 1589 aa33.55■■■□□ 2.96
SCARB2-212ENST00000638663 FBLN2P98095 1184 aa33.54■■■□□ 2.96
SCARB2-212ENST00000638663 KIAA0586Q9BVV6 1533 aa33.48■■■□□ 2.95
SCARB2-212ENST00000638663 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
SCARB2-212ENST00000638663 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
SCARB2-212ENST00000638663 KANK4Q5T7N3 995 aaPredicted RBP33.41■■■□□ 2.94
SCARB2-212ENST00000638663 FMN1Q68DA7 1419 aa33.41■■■□□ 2.94
SCARB2-212ENST00000638663 UGGT2Q9NYU1 1516 aa33.39■■■□□ 2.94
SCARB2-212ENST00000638663 NUP160Q12769 1436 aa33.36■■■□□ 2.93
SCARB2-212ENST00000638663 ATP1B4Q9UN42 357 aaPredicted RBP33.36■■■□□ 2.93
SCARB2-212ENST00000638663 CASKIN1Q8WXD9 1431 aa33.35■■■□□ 2.93
SCARB2-212ENST00000638663 FYCO1Q9BQS8 1478 aa33.34■■■□□ 2.93
SCARB2-212ENST00000638663 TIAM1Q13009 1591 aa33.32■■■□□ 2.93
SCARB2-212ENST00000638663 MAP3K1Q13233 1512 aa33.31■■■□□ 2.92
SCARB2-212ENST00000638663 DISP1Q96F81 1524 aa33.25■■■□□ 2.91
SCARB2-212ENST00000638663 KIAA0556O60303 1618 aa33.23■■■□□ 2.91
SCARB2-212ENST00000638663 CHD1O14646 1710 aa33.23■■■□□ 2.91
SCARB2-212ENST00000638663 CFAP43Q8NDM7 1665 aa33.22■■■□□ 2.91
SCARB2-212ENST00000638663 LRRC9Q6ZRR7 1453 aa33.18■■■□□ 2.9
SCARB2-212ENST00000638663 JPH4Q96JJ6 628 aa33.17■■■□□ 2.9
SCARB2-212ENST00000638663 HRCP23327 699 aa33.09■■■□□ 2.89
SCARB2-212ENST00000638663 LRRIQ1Q96JM4 1722 aa33.09■■■□□ 2.89
SCARB2-212ENST00000638663 CARMIL2Q6F5E8 1435 aa33.07■■■□□ 2.88
SCARB2-212ENST00000638663 HECW1Q76N89 1606 aa33.04■■■□□ 2.88
SCARB2-212ENST00000638663 CCDC18Q5T9S5 1454 aa32.98■■■□□ 2.87
SCARB2-212ENST00000638663 RRBP1Q9P2E9 1410 aaKnown RBP32.97■■■□□ 2.87
SCARB2-212ENST00000638663 HNRNPUL2Q1KMD3 747 aaKnown RBP32.96■■■□□ 2.87
SCARB2-212ENST00000638663 MTUS2Q5JR59 1369 aa32.96■■■□□ 2.87
SCARB2-212ENST00000638663 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
SCARB2-212ENST00000638663 EPRSP07814 1512 aaKnown RBP32.94■■■□□ 2.86
SCARB2-212ENST00000638663 PHLDB1Q86UU1 1377 aa32.93■■■□□ 2.86
SCARB2-212ENST00000638663 RAPGEF6Q8TEU7 1601 aa32.92■■■□□ 2.86
SCARB2-212ENST00000638663 ARID3CA6NKF2 412 aa32.9■■■□□ 2.86
SCARB2-212ENST00000638663 CCNB3Q8WWL7 1395 aa32.89■■■□□ 2.86
SCARB2-212ENST00000638663 CDK13Q14004 1512 aaKnown RBP32.89■■■□□ 2.86
SCARB2-212ENST00000638663 SHROOM2Q13796 1616 aa32.86■■■□□ 2.85
SCARB2-212ENST00000638663 NUP153P49790 1475 aaKnown RBP32.86■■■□□ 2.85
SCARB2-212ENST00000638663 PLB1Q6P1J6 1458 aa32.86■■■□□ 2.85
SCARB2-212ENST00000638663 MAGI3Q5TCQ9 1506 aa32.84■■■□□ 2.85
SCARB2-212ENST00000638663 EHBP1L1Q8N3D4 1523 aa32.84■■■□□ 2.85
SCARB2-212ENST00000638663 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.84
SCARB2-212ENST00000638663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.79■■■□□ 2.84
SCARB2-212ENST00000638663 SUPT6HQ7KZ85 1726 aaKnown RBP32.76■■■□□ 2.84
SCARB2-212ENST00000638663 NCOA2Q15596 1464 aa32.76■■■□□ 2.83
SCARB2-212ENST00000638663 PTPRGP23470 1445 aa32.75■■■□□ 2.83
SCARB2-212ENST00000638663 ABCA8O94911 1581 aa32.73■■■□□ 2.83
SCARB2-212ENST00000638663 ERCC6L2Q5T890 1561 aa32.71■■■□□ 2.83
SCARB2-212ENST00000638663 FAM50AQ14320 339 aaKnown RBP32.68■■■□□ 2.82
SCARB2-212ENST00000638663 ITGAEP38570 1179 aa32.67■■■□□ 2.82
SCARB2-212ENST00000638663 CCER1Q8TC90 406 aaPredicted RBP32.67■■■□□ 2.82
SCARB2-212ENST00000638663 ARHGEF11O15085 1522 aa32.66■■■□□ 2.82
SCARB2-212ENST00000638663 FGD6Q6ZV73 1430 aa32.65■■■□□ 2.82
SCARB2-212ENST00000638663 CDK11AQ9UQ88 783 aaPredicted RBP32.65■■■□□ 2.82
SCARB2-212ENST00000638663 MYOM3Q5VTT5 1437 aa32.64■■■□□ 2.81
SCARB2-212ENST00000638663 ZEB1P37275 1124 aaPredicted RBP32.61■■■□□ 2.81
SCARB2-212ENST00000638663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.56■■■□□ 2.8
SCARB2-212ENST00000638663 ATP10BO94823 1461 aa32.56■■■□□ 2.8
SCARB2-212ENST00000638663 UACAQ9BZF9 1416 aa32.55■■■□□ 2.8
SCARB2-212ENST00000638663 TROQ12816 1431 aaPredicted RBP32.54■■■□□ 2.8
SCARB2-212ENST00000638663 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
SCARB2-212ENST00000638663 PTPN23Q9H3S7 1636 aa32.46■■■□□ 2.79
SCARB2-212ENST00000638663 PLEKHD1A6NEE1 506 aa32.45■■■□□ 2.79
SCARB2-212ENST00000638663 ABCC2Q92887 1545 aa32.43■■■□□ 2.78
SCARB2-212ENST00000638663 MIA2Q96PC5 1412 aa32.41■■■□□ 2.78
SCARB2-212ENST00000638663 KIF14Q15058 1648 aa32.41■■■□□ 2.78
SCARB2-212ENST00000638663 ADCY10Q96PN6 1610 aa32.41■■■□□ 2.78
SCARB2-212ENST00000638663 TCOF1Q13428 1488 aaKnown RBP32.39■■■□□ 2.78
SCARB2-212ENST00000638663 PTPRKQ15262 1439 aa32.32■■■□□ 2.76
SCARB2-212ENST00000638663 SETD5Q9C0A6 1442 aa32.32■■■□□ 2.76
SCARB2-212ENST00000638663 UHRF1BP1LA0JNW5 1464 aa32.31■■■□□ 2.76
SCARB2-212ENST00000638663 RAB3GAP2Q9H2M9 1393 aa32.31■■■□□ 2.76
SCARB2-212ENST00000638663 GPATCH8Q9UKJ3 1502 aaKnown RBP32.28■■■□□ 2.76
SCARB2-212ENST00000638663 ITSN2Q9NZM3 1697 aa32.26■■■□□ 2.75
SCARB2-212ENST00000638663 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
SCARB2-212ENST00000638663 CFDP1Q9UEE9 299 aaPredicted RBP32.24■■■□□ 2.75
SCARB2-212ENST00000638663 DHX57Q6P158 1386 aaKnown RBP32.23■■■□□ 2.75
SCARB2-212ENST00000638663 ZNF644Q9H582 1327 aaPredicted RBP32.22■■■□□ 2.75
SCARB2-212ENST00000638663 KDM5BQ9UGL1 1544 aa32.21■■■□□ 2.75
SCARB2-212ENST00000638663 ZCCHC11Q5TAX3 1644 aaKnown RBP32.21■■■□□ 2.75
SCARB2-212ENST00000638663 CDC42BPAQ5VT25 1732 aa32.16■■■□□ 2.74
SCARB2-212ENST00000638663 CAMSAP2Q08AD1 1489 aa32.15■■■□□ 2.74
SCARB2-212ENST00000638663 HFM1A2PYH4 1435 aa32.14■■■□□ 2.74
SCARB2-212ENST00000638663 CHIC2Q9UKJ5 165 aa32.14■■■□□ 2.74
SCARB2-212ENST00000638663 ZNF777Q9ULD5 760 aaPredicted RBP32.14■■■□□ 2.74
SCARB2-212ENST00000638663 DAPK1P53355 1430 aa32.11■■■□□ 2.73
SCARB2-212ENST00000638663 DNMT1P26358 1616 aaKnown RBP32.1■■■□□ 2.73
SCARB2-212ENST00000638663 NAIPQ13075 1403 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms