RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
SRP54-AS1-205ENST00000636540 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
SRP54-AS1-205ENST00000636540 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
SRP54-AS1-205ENST00000636540 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
SRP54-AS1-205ENST00000636540 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
SRP54-AS1-205ENST00000636540 CYB5RLQ6IPT4 315 aa18.9■□□□□ 0.62
SRP54-AS1-205ENST00000636540 IQGAP2Q13576 1575 aa18.89■□□□□ 0.62
SRP54-AS1-205ENST00000636540 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
SRP54-AS1-205ENST00000636540 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
SRP54-AS1-205ENST00000636540 PRXQ9BXM0 1461 aa18.85■□□□□ 0.61
SRP54-AS1-205ENST00000636540 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
SRP54-AS1-205ENST00000636540 EEA1Q15075 1411 aa18.8■□□□□ 0.6
SRP54-AS1-205ENST00000636540 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
SRP54-AS1-205ENST00000636540 KIAA0556O60303 1618 aa18.74■□□□□ 0.59
SRP54-AS1-205ENST00000636540 DISP1Q96F81 1524 aa18.73■□□□□ 0.59
SRP54-AS1-205ENST00000636540 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
SRP54-AS1-205ENST00000636540 KIF21BO75037 1637 aa18.71■□□□□ 0.58
SRP54-AS1-205ENST00000636540 CARMIL2Q6F5E8 1435 aa18.69■□□□□ 0.58
SRP54-AS1-205ENST00000636540 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
SRP54-AS1-205ENST00000636540 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
SRP54-AS1-205ENST00000636540 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
SRP54-AS1-205ENST00000636540 GOLGA3Q08378 1498 aa18.6■□□□□ 0.57
SRP54-AS1-205ENST00000636540 PTPRGP23470 1445 aa18.6■□□□□ 0.57
SRP54-AS1-205ENST00000636540 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
SRP54-AS1-205ENST00000636540 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.57
SRP54-AS1-205ENST00000636540 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
SRP54-AS1-205ENST00000636540 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
SRP54-AS1-205ENST00000636540 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
SRP54-AS1-205ENST00000636540 DIP2BQ9P265 1576 aa18.52■□□□□ 0.56
SRP54-AS1-205ENST00000636540 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
SRP54-AS1-205ENST00000636540 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
SRP54-AS1-205ENST00000636540 ABCA8O94911 1581 aa18.51■□□□□ 0.55
SRP54-AS1-205ENST00000636540 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
SRP54-AS1-205ENST00000636540 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SRP54-AS1-205ENST00000636540 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
SRP54-AS1-205ENST00000636540 EFCAB5A4FU69 1503 aa18.47■□□□□ 0.55
SRP54-AS1-205ENST00000636540 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
SRP54-AS1-205ENST00000636540 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.55
SRP54-AS1-205ENST00000636540 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
SRP54-AS1-205ENST00000636540 RAPGEF6Q8TEU7 1601 aa18.41■□□□□ 0.54
SRP54-AS1-205ENST00000636540 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
SRP54-AS1-205ENST00000636540 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
SRP54-AS1-205ENST00000636540 GLI2P10070 1586 aa18.36■□□□□ 0.53
SRP54-AS1-205ENST00000636540 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.53
SRP54-AS1-205ENST00000636540 FOXD1Q16676 465 aa18.33■□□□□ 0.52
SRP54-AS1-205ENST00000636540 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
SRP54-AS1-205ENST00000636540 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
SRP54-AS1-205ENST00000636540 TSPOAP1O95153 1857 aa18.33■□□□□ 0.52
SRP54-AS1-205ENST00000636540 MAP3K4Q9Y6R4 1608 aa18.32■□□□□ 0.52
SRP54-AS1-205ENST00000636540 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
SRP54-AS1-205ENST00000636540 EPRSP07814 1512 aaKnown RBP18.32■□□□□ 0.52
SRP54-AS1-205ENST00000636540 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
SRP54-AS1-205ENST00000636540 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
SRP54-AS1-205ENST00000636540 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
SRP54-AS1-205ENST00000636540 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
SRP54-AS1-205ENST00000636540 FAM69CQ0P6D2 419 aa18.29■□□□□ 0.52
SRP54-AS1-205ENST00000636540 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
SRP54-AS1-205ENST00000636540 ATP10BO94823 1461 aa18.26■□□□□ 0.51
SRP54-AS1-205ENST00000636540 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
SRP54-AS1-205ENST00000636540 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
SRP54-AS1-205ENST00000636540 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
SRP54-AS1-205ENST00000636540 KDM6BO15054 1643 aa18.21■□□□□ 0.51
SRP54-AS1-205ENST00000636540 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
SRP54-AS1-205ENST00000636540 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
SRP54-AS1-205ENST00000636540 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
SRP54-AS1-205ENST00000636540 CDK13Q14004 1512 aaKnown RBP18.18■□□□□ 0.5
SRP54-AS1-205ENST00000636540 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
SRP54-AS1-205ENST00000636540 TEX14Q8IWB6 1497 aa18.15■□□□□ 0.5
SRP54-AS1-205ENST00000636540 CLIP1P30622 1438 aa18.14■□□□□ 0.49
SRP54-AS1-205ENST00000636540 MAGI3Q5TCQ9 1506 aa18.13■□□□□ 0.49
SRP54-AS1-205ENST00000636540 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
SRP54-AS1-205ENST00000636540 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
SRP54-AS1-205ENST00000636540 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.49
SRP54-AS1-205ENST00000636540 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
SRP54-AS1-205ENST00000636540 CEP162Q5TB80 1403 aa18.06■□□□□ 0.48
SRP54-AS1-205ENST00000636540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.06■□□□□ 0.48
SRP54-AS1-205ENST00000636540 KCNH8Q96L42 1107 aa18.05■□□□□ 0.48
SRP54-AS1-205ENST00000636540 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
SRP54-AS1-205ENST00000636540 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
SRP54-AS1-205ENST00000636540 KIF14Q15058 1648 aa18.03■□□□□ 0.48
SRP54-AS1-205ENST00000636540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
SRP54-AS1-205ENST00000636540 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
SRP54-AS1-205ENST00000636540 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
SRP54-AS1-205ENST00000636540 MYO5CQ9NQX4 1742 aa18■□□□□ 0.47
SRP54-AS1-205ENST00000636540 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
SRP54-AS1-205ENST00000636540 PLEKHD1A6NEE1 506 aa17.98■□□□□ 0.47
SRP54-AS1-205ENST00000636540 NEO1Q92859 1461 aa17.98■□□□□ 0.47
SRP54-AS1-205ENST00000636540 ARAP3Q8WWN8 1544 aa17.98■□□□□ 0.47
SRP54-AS1-205ENST00000636540 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.46
SRP54-AS1-205ENST00000636540 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
SRP54-AS1-205ENST00000636540 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
SRP54-AS1-205ENST00000636540 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
SRP54-AS1-205ENST00000636540 FANCAO15360 1455 aa17.92■□□□□ 0.46
SRP54-AS1-205ENST00000636540 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
SRP54-AS1-205ENST00000636540 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
SRP54-AS1-205ENST00000636540 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
SRP54-AS1-205ENST00000636540 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
SRP54-AS1-205ENST00000636540 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.45
SRP54-AS1-205ENST00000636540 PLCH2O75038 1416 aa17.88■□□□□ 0.45
SRP54-AS1-205ENST00000636540 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms