RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 PIAS4Q8N2W9 510 aaPredicted RBP9.16□□□□□ -0.94
CPS1-IT1-201ENST00000628368 EIF4G3O43432 1585 aaKnown RBP9.16□□□□□ -0.94
CPS1-IT1-201ENST00000628368 FHAD1B1AJZ9 1412 aa9.16□□□□□ -0.94
CPS1-IT1-201ENST00000628368 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.95
CPS1-IT1-201ENST00000628368 ADAMTS12P58397 1594 aa9.15□□□□□ -0.95
CPS1-IT1-201ENST00000628368 ARHGAP35Q9NRY4 1499 aa9.14□□□□□ -0.95
CPS1-IT1-201ENST00000628368 ARAP1Q96P48 1450 aa9.14□□□□□ -0.95
CPS1-IT1-201ENST00000628368 CTTNBP2Q8WZ74 1663 aa9.13□□□□□ -0.95
CPS1-IT1-201ENST00000628368 TRIM26Q12899 539 aaPredicted RBP9.13□□□□□ -0.95
CPS1-IT1-201ENST00000628368 PCGF6Q9BYE7 350 aa9.13□□□□□ -0.95
CPS1-IT1-201ENST00000628368 PPARGC1BQ86YN6 1023 aaKnown RBP9.13□□□□□ -0.95
CPS1-IT1-201ENST00000628368 SNAPC4Q5SXM2 1469 aa9.12□□□□□ -0.95
CPS1-IT1-201ENST00000628368 MAGI1Q96QZ7 1491 aaPredicted RBP9.1□□□□□ -0.95
CPS1-IT1-201ENST00000628368 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
CPS1-IT1-201ENST00000628368 GRIN2AQ12879 1464 aa9.07□□□□□ -0.96
CPS1-IT1-201ENST00000628368 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
CPS1-IT1-201ENST00000628368 P3H3Q8IVL6 736 aa9.06□□□□□ -0.96
CPS1-IT1-201ENST00000628368 CHMP7Q8WUX9 453 aaPredicted RBP9.06□□□□□ -0.96
CPS1-IT1-201ENST00000628368 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
CPS1-IT1-201ENST00000628368 SAMD9Q5K651 1589 aa9.05□□□□□ -0.96
CPS1-IT1-201ENST00000628368 APLP2Q06481 763 aa9.05□□□□□ -0.96
CPS1-IT1-201ENST00000628368 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
CPS1-IT1-201ENST00000628368 KIAA0586Q9BVV6 1533 aa9.04□□□□□ -0.96
CPS1-IT1-201ENST00000628368 TTBK1Q5TCY1 1321 aaPredicted RBP9.03□□□□□ -0.96
CPS1-IT1-201ENST00000628368 KCNA4P22459 653 aa9.03□□□□□ -0.96
CPS1-IT1-201ENST00000628368 FBLN2P98095 1184 aa9.03□□□□□ -0.96
CPS1-IT1-201ENST00000628368 CEP170Q5SW79 1584 aa9.02□□□□□ -0.97
CPS1-IT1-201ENST00000628368 UGGT2Q9NYU1 1516 aa9.01□□□□□ -0.97
CPS1-IT1-201ENST00000628368 NUP160Q12769 1436 aa9.01□□□□□ -0.97
CPS1-IT1-201ENST00000628368 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
CPS1-IT1-201ENST00000628368 FMN1Q68DA7 1419 aa9□□□□□ -0.97
CPS1-IT1-201ENST00000628368 PCF11O94913 1555 aaKnown RBP8.99□□□□□ -0.97
CPS1-IT1-201ENST00000628368 MAP3K1Q13233 1512 aa8.99□□□□□ -0.97
CPS1-IT1-201ENST00000628368 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
CPS1-IT1-201ENST00000628368 FYCO1Q9BQS8 1478 aa8.98□□□□□ -0.97
CPS1-IT1-201ENST00000628368 DISP1Q96F81 1524 aa8.98□□□□□ -0.97
CPS1-IT1-201ENST00000628368 TIAM1Q13009 1591 aa8.97□□□□□ -0.97
CPS1-IT1-201ENST00000628368 CHD1O14646 1710 aa8.97□□□□□ -0.97
CPS1-IT1-201ENST00000628368 KIAA0556O60303 1618 aa8.96□□□□□ -0.98
CPS1-IT1-201ENST00000628368 JPH4Q96JJ6 628 aa8.96□□□□□ -0.98
CPS1-IT1-201ENST00000628368 ATP1B4Q9UN42 357 aaPredicted RBP8.96□□□□□ -0.98
CPS1-IT1-201ENST00000628368 CFAP43Q8NDM7 1665 aa8.95□□□□□ -0.98
CPS1-IT1-201ENST00000628368 LRRC9Q6ZRR7 1453 aa8.94□□□□□ -0.98
CPS1-IT1-201ENST00000628368 LRRIQ1Q96JM4 1722 aa8.93□□□□□ -0.98
CPS1-IT1-201ENST00000628368 CARMIL2Q6F5E8 1435 aa8.92□□□□□ -0.98
CPS1-IT1-201ENST00000628368 MSH5O43196 834 aa8.91□□□□□ -0.98
CPS1-IT1-201ENST00000628368 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
CPS1-IT1-201ENST00000628368 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
CPS1-IT1-201ENST00000628368 PRG4Q92954 1404 aaPredicted RBP8.89□□□□□ -0.99
CPS1-IT1-201ENST00000628368 SHROOM2Q13796 1616 aa8.89□□□□□ -0.99
CPS1-IT1-201ENST00000628368 RRBP1Q9P2E9 1410 aaKnown RBP8.88□□□□□ -0.99
CPS1-IT1-201ENST00000628368 EPRSP07814 1512 aaKnown RBP8.88□□□□□ -0.99
CPS1-IT1-201ENST00000628368 RAPGEF6Q8TEU7 1601 aa8.87□□□□□ -0.99
CPS1-IT1-201ENST00000628368 HRCP23327 699 aa8.87□□□□□ -0.99
CPS1-IT1-201ENST00000628368 CLASP1Q7Z460 1538 aa8.87□□□□□ -0.99
CPS1-IT1-201ENST00000628368 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
CPS1-IT1-201ENST00000628368 PHLDB1Q86UU1 1377 aa8.86□□□□□ -0.99
CPS1-IT1-201ENST00000628368 NUP153P49790 1475 aaKnown RBP8.86□□□□□ -0.99
CPS1-IT1-201ENST00000628368 PLB1Q6P1J6 1458 aa8.85□□□□□ -0.99
CPS1-IT1-201ENST00000628368 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
CPS1-IT1-201ENST00000628368 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
CPS1-IT1-201ENST00000628368 CCNB3Q8WWL7 1395 aa8.85□□□□□ -0.99
CPS1-IT1-201ENST00000628368 HNRNPUL2Q1KMD3 747 aaKnown RBP8.85□□□□□ -0.99
CPS1-IT1-201ENST00000628368 EHBP1L1Q8N3D4 1523 aa8.84□□□□□ -0.99
CPS1-IT1-201ENST00000628368 ARID3CA6NKF2 412 aa8.83□□□□□ -1
CPS1-IT1-201ENST00000628368 ABCA8O94911 1581 aa8.83□□□□□ -1
CPS1-IT1-201ENST00000628368 PTPRGP23470 1445 aa8.83□□□□□ -1
CPS1-IT1-201ENST00000628368 ERCC6L2Q5T890 1561 aa8.83□□□□□ -1
CPS1-IT1-201ENST00000628368 SUPT6HQ7KZ85 1726 aaKnown RBP8.82□□□□□ -1
CPS1-IT1-201ENST00000628368 NCOA2Q15596 1464 aa8.82□□□□□ -1
CPS1-IT1-201ENST00000628368 ARHGEF11O15085 1522 aa8.81□□□□□ -1
CPS1-IT1-201ENST00000628368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.8□□□□□ -1
CPS1-IT1-201ENST00000628368 CDK11AQ9UQ88 783 aaPredicted RBP8.8□□□□□ -1
CPS1-IT1-201ENST00000628368 ATP10BO94823 1461 aa8.79□□□□□ -1
CPS1-IT1-201ENST00000628368 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
CPS1-IT1-201ENST00000628368 FGD6Q6ZV73 1430 aa8.79□□□□□ -1
CPS1-IT1-201ENST00000628368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.79□□□□□ -1
CPS1-IT1-201ENST00000628368 OSCARQ8IYS5 282 aa8.79□□□□□ -1
CPS1-IT1-201ENST00000628368 UACAQ9BZF9 1416 aa8.78□□□□□ -1
CPS1-IT1-201ENST00000628368 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
CPS1-IT1-201ENST00000628368 TROQ12816 1431 aaPredicted RBP8.77□□□□□ -1.01
CPS1-IT1-201ENST00000628368 ITGAEP38570 1179 aa8.76□□□□□ -1.01
CPS1-IT1-201ENST00000628368 CCER1Q8TC90 406 aaPredicted RBP8.76□□□□□ -1.01
CPS1-IT1-201ENST00000628368 ZEB1P37275 1124 aaPredicted RBP8.75□□□□□ -1.01
CPS1-IT1-201ENST00000628368 ABCC2Q92887 1545 aa8.75□□□□□ -1.01
CPS1-IT1-201ENST00000628368 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
CPS1-IT1-201ENST00000628368 ADCY10Q96PN6 1610 aa8.74□□□□□ -1.01
CPS1-IT1-201ENST00000628368 PTPN23Q9H3S7 1636 aa8.74□□□□□ -1.01
CPS1-IT1-201ENST00000628368 MIA2Q96PC5 1412 aa8.74□□□□□ -1.01
CPS1-IT1-201ENST00000628368 UHRF1BP1LA0JNW5 1464 aa8.73□□□□□ -1.01
CPS1-IT1-201ENST00000628368 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
CPS1-IT1-201ENST00000628368 KIF14Q15058 1648 aa8.73□□□□□ -1.01
CPS1-IT1-201ENST00000628368 PTPRKQ15262 1439 aa8.71□□□□□ -1.02
CPS1-IT1-201ENST00000628368 GPATCH8Q9UKJ3 1502 aaKnown RBP8.71□□□□□ -1.02
CPS1-IT1-201ENST00000628368 ABCC10Q5T3U5 1492 aa8.7□□□□□ -1.02
CPS1-IT1-201ENST00000628368 KDM5BQ9UGL1 1544 aa8.7□□□□□ -1.02
CPS1-IT1-201ENST00000628368 SETD5Q9C0A6 1442 aa8.69□□□□□ -1.02
CPS1-IT1-201ENST00000628368 ZCCHC11Q5TAX3 1644 aaKnown RBP8.69□□□□□ -1.02
CPS1-IT1-201ENST00000628368 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
CPS1-IT1-201ENST00000628368 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms