RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
CPS1-IT1-201ENST00000628368 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
CPS1-IT1-201ENST00000628368 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
CPS1-IT1-201ENST00000628368 CCDC180Q9P1Z9 1646 aa11.51□□□□□ -0.57
CPS1-IT1-201ENST00000628368 ZCCHC6Q5VYS8 1495 aaKnown RBP11.1□□□□□ -0.63
CPS1-IT1-201ENST00000628368 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
CPS1-IT1-201ENST00000628368 DCAF8L2P0C7V8 631 aa10.92□□□□□ -0.66
CPS1-IT1-201ENST00000628368 ABCC9O60706 1549 aa10.89□□□□□ -0.67
CPS1-IT1-201ENST00000628368 POTEDQ86YR6 584 aa10.86□□□□□ -0.67
CPS1-IT1-201ENST00000628368 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
CPS1-IT1-201ENST00000628368 SHROOM4Q9ULL8 1493 aa10.78□□□□□ -0.68
CPS1-IT1-201ENST00000628368 NACADO15069 1562 aa10.72□□□□□ -0.69
CPS1-IT1-201ENST00000628368 RB1CC1Q8TDY2 1594 aa10.62□□□□□ -0.71
CPS1-IT1-201ENST00000628368 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
CPS1-IT1-201ENST00000628368 PHF23Q9BUL5 403 aaPredicted RBP10.54□□□□□ -0.72
CPS1-IT1-201ENST00000628368 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
CPS1-IT1-201ENST00000628368 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
CPS1-IT1-201ENST00000628368 SENP3Q9H4L4 574 aaPredicted RBP10.38□□□□□ -0.75
CPS1-IT1-201ENST00000628368 BICRAQ9NZM4 1560 aa10.32□□□□□ -0.76
CPS1-IT1-201ENST00000628368 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPS1-IT1-201ENST00000628368 CECR2Q9BXF3 1484 aa10.28□□□□□ -0.76
CPS1-IT1-201ENST00000628368 RSF1Q96T23 1441 aaPredicted RBP10.26□□□□□ -0.77
CPS1-IT1-201ENST00000628368 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.77
CPS1-IT1-201ENST00000628368 BAZ1AQ9NRL2 1556 aaPredicted RBP10.19□□□□□ -0.78
CPS1-IT1-201ENST00000628368 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
CPS1-IT1-201ENST00000628368 WIZO95785 1651 aa10.13□□□□□ -0.79
CPS1-IT1-201ENST00000628368 PEG3Q9GZU2 1588 aa10.03□□□□□ -0.8
CPS1-IT1-201ENST00000628368 TOP2AP11388 1531 aaKnown RBP10.01□□□□□ -0.81
CPS1-IT1-201ENST00000628368 EIF4G1Q04637 1599 aaKnown RBP10□□□□□ -0.81
CPS1-IT1-201ENST00000628368 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
CPS1-IT1-201ENST00000628368 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
CPS1-IT1-201ENST00000628368 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
CPS1-IT1-201ENST00000628368 BAZ1BQ9UIG0 1483 aaKnown RBP9.93□□□□□ -0.82
CPS1-IT1-201ENST00000628368 NCAPD3P42695 1498 aa9.91□□□□□ -0.82
CPS1-IT1-201ENST00000628368 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
CPS1-IT1-201ENST00000628368 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
CPS1-IT1-201ENST00000628368 FOXD1Q16676 465 aa9.79□□□□□ -0.84
CPS1-IT1-201ENST00000628368 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
CPS1-IT1-201ENST00000628368 ABCC8Q09428 1581 aa9.71□□□□□ -0.85
CPS1-IT1-201ENST00000628368 CFTRP13569 1480 aa9.69□□□□□ -0.86
CPS1-IT1-201ENST00000628368 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.86
CPS1-IT1-201ENST00000628368 WRNQ14191 1432 aaPredicted RBP eCLIP9.65□□□□□ -0.87
CPS1-IT1-201ENST00000628368 DNAJC5BQ9UF47 199 aa9.64□□□□□ -0.87
CPS1-IT1-201ENST00000628368 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
CPS1-IT1-201ENST00000628368 SYNJ1O43426 1573 aa9.61□□□□□ -0.87
CPS1-IT1-201ENST00000628368 FAM9AQ8IZU1 332 aaPredicted RBP9.59□□□□□ -0.87
CPS1-IT1-201ENST00000628368 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
CPS1-IT1-201ENST00000628368 NESP48681 1621 aa9.57□□□□□ -0.88
CPS1-IT1-201ENST00000628368 TOP2BQ02880 1626 aa9.57□□□□□ -0.88
CPS1-IT1-201ENST00000628368 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
CPS1-IT1-201ENST00000628368 BIVM-ERCC5R4GMW8 1640 aa9.56□□□□□ -0.88
CPS1-IT1-201ENST00000628368 PLPPR3Q6T4P5 718 aa9.55□□□□□ -0.88
CPS1-IT1-201ENST00000628368 CUX1P39880 1505 aa9.55□□□□□ -0.88
CPS1-IT1-201ENST00000628368 SOGA1O94964 1423 aa9.54□□□□□ -0.88
CPS1-IT1-201ENST00000628368 FANCD2Q9BXW9 1451 aa9.54□□□□□ -0.88
CPS1-IT1-201ENST00000628368 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
CPS1-IT1-201ENST00000628368 EEA1Q15075 1411 aa9.5□□□□□ -0.89
CPS1-IT1-201ENST00000628368 PDS5BQ9NTI5 1447 aa9.48□□□□□ -0.89
CPS1-IT1-201ENST00000628368 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
CPS1-IT1-201ENST00000628368 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
CPS1-IT1-201ENST00000628368 DNMBPQ6XZF7 1577 aa9.45□□□□□ -0.9
CPS1-IT1-201ENST00000628368 EHMT2Q96KQ7 1210 aa9.45□□□□□ -0.9
CPS1-IT1-201ENST00000628368 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
CPS1-IT1-201ENST00000628368 TOPBP1Q92547 1522 aa9.44□□□□□ -0.9
CPS1-IT1-201ENST00000628368 FGD5Q6ZNL6 1462 aa9.44□□□□□ -0.9
CPS1-IT1-201ENST00000628368 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
CPS1-IT1-201ENST00000628368 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
CPS1-IT1-201ENST00000628368 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
CPS1-IT1-201ENST00000628368 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.91
CPS1-IT1-201ENST00000628368 KIF21BO75037 1637 aa9.38□□□□□ -0.91
CPS1-IT1-201ENST00000628368 CUX2O14529 1486 aa9.38□□□□□ -0.91
CPS1-IT1-201ENST00000628368 GOLGA3Q08378 1498 aa9.37□□□□□ -0.91
CPS1-IT1-201ENST00000628368 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
CPS1-IT1-201ENST00000628368 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
CPS1-IT1-201ENST00000628368 TNIKQ9UKE5 1360 aa9.36□□□□□ -0.91
CPS1-IT1-201ENST00000628368 ABCA10Q8WWZ4 1543 aa9.35□□□□□ -0.91
CPS1-IT1-201ENST00000628368 PRXQ9BXM0 1461 aa9.35□□□□□ -0.91
CPS1-IT1-201ENST00000628368 ADRA2BP18089 450 aa9.34□□□□□ -0.91
CPS1-IT1-201ENST00000628368 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
CPS1-IT1-201ENST00000628368 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
CPS1-IT1-201ENST00000628368 IGF1RP08069 1367 aa9.34□□□□□ -0.91
CPS1-IT1-201ENST00000628368 ERCC6Q03468 1493 aa9.32□□□□□ -0.92
CPS1-IT1-201ENST00000628368 ERICH3Q5RHP9 1530 aa9.32□□□□□ -0.92
CPS1-IT1-201ENST00000628368 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
CPS1-IT1-201ENST00000628368 WDR62O43379 1518 aa9.32□□□□□ -0.92
CPS1-IT1-201ENST00000628368 CEP162Q5TB80 1403 aa9.3□□□□□ -0.92
CPS1-IT1-201ENST00000628368 TARBP1Q13395 1621 aaKnown RBP9.3□□□□□ -0.92
CPS1-IT1-201ENST00000628368 THOC2Q8NI27 1593 aaKnown RBP9.28□□□□□ -0.92
CPS1-IT1-201ENST00000628368 CARMIL1Q5VZK9 1371 aa9.28□□□□□ -0.92
CPS1-IT1-201ENST00000628368 TDRD9Q8NDG6 1382 aaKnown RBP9.28□□□□□ -0.92
CPS1-IT1-201ENST00000628368 ABCA5Q8WWZ7 1642 aa9.28□□□□□ -0.92
CPS1-IT1-201ENST00000628368 GAPVD1Q14C86 1478 aa9.26□□□□□ -0.93
CPS1-IT1-201ENST00000628368 IFT140Q96RY7 1462 aa9.25□□□□□ -0.93
CPS1-IT1-201ENST00000628368 CUL7Q14999 1698 aa9.23□□□□□ -0.93
CPS1-IT1-201ENST00000628368 CLIP1P30622 1438 aa9.23□□□□□ -0.93
CPS1-IT1-201ENST00000628368 AQRO60306 1485 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPS1-IT1-201ENST00000628368 ZNF608Q9ULD9 1512 aaPredicted RBP9.21□□□□□ -0.93
CPS1-IT1-201ENST00000628368 PBRM1Q86U86 1689 aa9.2□□□□□ -0.94
CPS1-IT1-201ENST00000628368 RANGAP1P46060 587 aaPredicted RBP9.19□□□□□ -0.94
CPS1-IT1-201ENST00000628368 GRIN2BQ13224 1484 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms