RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 CTTNBP2Q8WZ74 1663 aa32.47■■■□□ 2.79
PCDHB12-203ENST00000624949 CLIP1P30622 1438 aa32.46■■■□□ 2.79
PCDHB12-203ENST00000624949 CHD1O14646 1710 aa32.33■■■□□ 2.77
PCDHB12-203ENST00000624949 CEP170Q5SW79 1584 aa32.3■■■□□ 2.76
PCDHB12-203ENST00000624949 IQGAP2Q13576 1575 aa32.27■■■□□ 2.76
PCDHB12-203ENST00000624949 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
PCDHB12-203ENST00000624949 KIAA0586Q9BVV6 1533 aa32.24■■■□□ 2.75
PCDHB12-203ENST00000624949 NUP160Q12769 1436 aa32.24■■■□□ 2.75
PCDHB12-203ENST00000624949 P3H3Q8IVL6 736 aa32.2■■■□□ 2.75
PCDHB12-203ENST00000624949 ARAP1Q96P48 1450 aa32.18■■■□□ 2.74
PCDHB12-203ENST00000624949 EFCAB5A4FU69 1503 aa32.13■■■□□ 2.73
PCDHB12-203ENST00000624949 VPS8Q8N3P4 1428 aa32.09■■■□□ 2.73
PCDHB12-203ENST00000624949 SAMD9Q5K651 1589 aa32.08■■■□□ 2.73
PCDHB12-203ENST00000624949 FHOD3Q2V2M9 1422 aa32.08■■■□□ 2.73
PCDHB12-203ENST00000624949 UGGT2Q9NYU1 1516 aa32.07■■■□□ 2.72
PCDHB12-203ENST00000624949 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
PCDHB12-203ENST00000624949 DISP1Q96F81 1524 aa31.96■■■□□ 2.71
PCDHB12-203ENST00000624949 KIAA0556O60303 1618 aa31.94■■■□□ 2.7
PCDHB12-203ENST00000624949 CLASP1Q7Z460 1538 aa31.91■■■□□ 2.7
PCDHB12-203ENST00000624949 TTBK1Q5TCY1 1321 aaPredicted RBP31.89■■■□□ 2.7
PCDHB12-203ENST00000624949 CARMIL2Q6F5E8 1435 aa31.88■■■□□ 2.69
PCDHB12-203ENST00000624949 PPARGC1BQ86YN6 1023 aaKnown RBP31.88■■■□□ 2.69
PCDHB12-203ENST00000624949 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
PCDHB12-203ENST00000624949 FMN1Q68DA7 1419 aa31.87■■■□□ 2.69
PCDHB12-203ENST00000624949 PRG4Q92954 1404 aaPredicted RBP31.87■■■□□ 2.69
PCDHB12-203ENST00000624949 SHROOM2Q13796 1616 aa31.85■■■□□ 2.69
PCDHB12-203ENST00000624949 ATP1B4Q9UN42 357 aaPredicted RBP31.83■■■□□ 2.69
PCDHB12-203ENST00000624949 APLP2Q06481 763 aa31.82■■■□□ 2.68
PCDHB12-203ENST00000624949 PCF11O94913 1555 aaKnown RBP31.82■■■□□ 2.68
PCDHB12-203ENST00000624949 CASKIN1Q8WXD9 1431 aa31.75■■■□□ 2.67
PCDHB12-203ENST00000624949 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
PCDHB12-203ENST00000624949 FYCO1Q9BQS8 1478 aa31.72■■■□□ 2.67
PCDHB12-203ENST00000624949 PTPRGP23470 1445 aa31.62■■■□□ 2.65
PCDHB12-203ENST00000624949 PLB1Q6P1J6 1458 aa31.6■■■□□ 2.65
PCDHB12-203ENST00000624949 HECW1Q76N89 1606 aa31.59■■■□□ 2.65
PCDHB12-203ENST00000624949 RAPGEF6Q8TEU7 1601 aa31.59■■■□□ 2.65
PCDHB12-203ENST00000624949 TIAM1Q13009 1591 aa31.59■■■□□ 2.65
PCDHB12-203ENST00000624949 KANK4Q5T7N3 995 aaPredicted RBP31.58■■■□□ 2.65
PCDHB12-203ENST00000624949 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
PCDHB12-203ENST00000624949 ARID3CA6NKF2 412 aa31.57■■■□□ 2.64
PCDHB12-203ENST00000624949 CFAP43Q8NDM7 1665 aa31.54■■■□□ 2.64
PCDHB12-203ENST00000624949 MAP3K1Q13233 1512 aa31.54■■■□□ 2.64
PCDHB12-203ENST00000624949 NUP153P49790 1475 aaKnown RBP31.5■■■□□ 2.63
PCDHB12-203ENST00000624949 EPRSP07814 1512 aaKnown RBP31.49■■■□□ 2.63
PCDHB12-203ENST00000624949 ABCA8O94911 1581 aa31.49■■■□□ 2.63
PCDHB12-203ENST00000624949 CCDC18Q5T9S5 1454 aa31.47■■■□□ 2.63
PCDHB12-203ENST00000624949 CDK13Q14004 1512 aaKnown RBP31.46■■■□□ 2.63
PCDHB12-203ENST00000624949 LRRC9Q6ZRR7 1453 aa31.45■■■□□ 2.63
PCDHB12-203ENST00000624949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.43■■■□□ 2.62
PCDHB12-203ENST00000624949 HNRNPUL2Q1KMD3 747 aaKnown RBP31.43■■■□□ 2.62
PCDHB12-203ENST00000624949 UACAQ9BZF9 1416 aa31.42■■■□□ 2.62
PCDHB12-203ENST00000624949 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
PCDHB12-203ENST00000624949 MTUS2Q5JR59 1369 aa31.37■■■□□ 2.61
PCDHB12-203ENST00000624949 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
PCDHB12-203ENST00000624949 ARHGEF11O15085 1522 aa31.33■■■□□ 2.61
PCDHB12-203ENST00000624949 ABCC2Q92887 1545 aa31.32■■■□□ 2.6
PCDHB12-203ENST00000624949 MAGI3Q5TCQ9 1506 aa31.32■■■□□ 2.6
PCDHB12-203ENST00000624949 ATP10BO94823 1461 aa31.29■■■□□ 2.6
PCDHB12-203ENST00000624949 EHBP1L1Q8N3D4 1523 aa31.27■■■□□ 2.6
PCDHB12-203ENST00000624949 CDK11AQ9UQ88 783 aaPredicted RBP31.26■■■□□ 2.59
PCDHB12-203ENST00000624949 UHRF1BP1LA0JNW5 1464 aa31.23■■■□□ 2.59
PCDHB12-203ENST00000624949 RIMBP3CA6NJZ7 1639 aa31.21■■■□□ 2.59
PCDHB12-203ENST00000624949 RIMBP3BA6NNM3 1639 aa31.21■■■□□ 2.59
PCDHB12-203ENST00000624949 RIMBP3Q9UFD9 1639 aa31.21■■■□□ 2.59
PCDHB12-203ENST00000624949 ADCY10Q96PN6 1610 aa31.2■■■□□ 2.59
PCDHB12-203ENST00000624949 SUPT6HQ7KZ85 1726 aaKnown RBP31.18■■■□□ 2.58
PCDHB12-203ENST00000624949 PLEKHD1A6NEE1 506 aa31.17■■■□□ 2.58
PCDHB12-203ENST00000624949 PHLDB1Q86UU1 1377 aa31.16■■■□□ 2.58
PCDHB12-203ENST00000624949 NCOA2Q15596 1464 aa31.15■■■□□ 2.58
PCDHB12-203ENST00000624949 TROQ12816 1431 aaPredicted RBP31.14■■■□□ 2.58
PCDHB12-203ENST00000624949 ZCCHC11Q5TAX3 1644 aaKnown RBP31.14■■■□□ 2.57
PCDHB12-203ENST00000624949 KDM5BQ9UGL1 1544 aa31.13■■■□□ 2.57
PCDHB12-203ENST00000624949 CYB5RLQ6IPT4 315 aa31.1■■■□□ 2.57
PCDHB12-203ENST00000624949 KIF14Q15058 1648 aa31.04■■■□□ 2.56
PCDHB12-203ENST00000624949 RRBP1Q9P2E9 1410 aaKnown RBP31.03■■■□□ 2.56
PCDHB12-203ENST00000624949 CCNB3Q8WWL7 1395 aa31■■■□□ 2.55
PCDHB12-203ENST00000624949 NPM1P06748 294 aaKnown RBP eCLIP31■■■□□ 2.55
PCDHB12-203ENST00000624949 MYOM3Q5VTT5 1437 aa30.99■■■□□ 2.55
PCDHB12-203ENST00000624949 KCNH8Q96L42 1107 aa30.96■■■□□ 2.55
PCDHB12-203ENST00000624949 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.54
PCDHB12-203ENST00000624949 FAM50AQ14320 339 aaKnown RBP30.94■■■□□ 2.54
PCDHB12-203ENST00000624949 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
PCDHB12-203ENST00000624949 ASXL2Q76L83 1435 aa30.88■■■□□ 2.53
PCDHB12-203ENST00000624949 WDR7Q9Y4E6 1490 aa30.88■■■□□ 2.53
PCDHB12-203ENST00000624949 ITGAEP38570 1179 aa30.86■■■□□ 2.53
PCDHB12-203ENST00000624949 GPATCH8Q9UKJ3 1502 aaKnown RBP30.85■■■□□ 2.53
PCDHB12-203ENST00000624949 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
PCDHB12-203ENST00000624949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.83■■■□□ 2.53
PCDHB12-203ENST00000624949 ITSN2Q9NZM3 1697 aa30.83■■■□□ 2.53
PCDHB12-203ENST00000624949 MIA2Q96PC5 1412 aa30.82■■■□□ 2.52
PCDHB12-203ENST00000624949 TTC37Q6PGP7 1564 aa30.81■■■□□ 2.52
PCDHB12-203ENST00000624949 CFDP1Q9UEE9 299 aaPredicted RBP30.81■■■□□ 2.52
PCDHB12-203ENST00000624949 CDC42BPAQ5VT25 1732 aa30.81■■■□□ 2.52
PCDHB12-203ENST00000624949 HRCP23327 699 aa30.77■■■□□ 2.52
PCDHB12-203ENST00000624949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.76■■■□□ 2.52
PCDHB12-203ENST00000624949 ZNF777Q9ULD5 760 aaPredicted RBP30.76■■■□□ 2.51
PCDHB12-203ENST00000624949 TCOF1Q13428 1488 aaKnown RBP30.74■■■□□ 2.51
PCDHB12-203ENST00000624949 ZNF644Q9H582 1327 aaPredicted RBP30.74■■■□□ 2.51
PCDHB12-203ENST00000624949 MYO5CQ9NQX4 1742 aa30.7■■■□□ 2.51
PCDHB12-203ENST00000624949 PREX2Q70Z35 1606 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms