RNA–Protein interactions for RNA: ENST00000619142.4

GTF2IRD2B-208, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-208ENST00000619142 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
GTF2IRD2B-208ENST00000619142 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
GTF2IRD2B-208ENST00000619142 APLP2Q06481 763 aa31.44■■■□□ 2.62
GTF2IRD2B-208ENST00000619142 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
GTF2IRD2B-208ENST00000619142 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
GTF2IRD2B-208ENST00000619142 TTBK1Q5TCY1 1321 aaPredicted RBP31.34■■■□□ 2.61
GTF2IRD2B-208ENST00000619142 MAGI1Q96QZ7 1491 aaPredicted RBP31.31■■■□□ 2.6
GTF2IRD2B-208ENST00000619142 SAMD9Q5K651 1589 aa31.26■■■□□ 2.59
GTF2IRD2B-208ENST00000619142 FHOD3Q2V2M9 1422 aa31.24■■■□□ 2.59
GTF2IRD2B-208ENST00000619142 P3H3Q8IVL6 736 aa31.23■■■□□ 2.59
GTF2IRD2B-208ENST00000619142 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
GTF2IRD2B-208ENST00000619142 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
GTF2IRD2B-208ENST00000619142 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
GTF2IRD2B-208ENST00000619142 MAP3K1Q13233 1512 aa31.16■■■□□ 2.58
GTF2IRD2B-208ENST00000619142 HRCP23327 699 aa31.15■■■□□ 2.58
GTF2IRD2B-208ENST00000619142 FMN1Q68DA7 1419 aa31.14■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 PCF11O94913 1555 aaKnown RBP31.14■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 KIAA0586Q9BVV6 1533 aa31.12■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 CHMP7Q8WUX9 453 aaPredicted RBP31.11■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 FYCO1Q9BQS8 1478 aa31.1■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 TIAM1Q13009 1591 aa31.1■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 KANK4Q5T7N3 995 aaPredicted RBP31.1■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 CASKIN1Q8WXD9 1431 aa31.09■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 UGGT2Q9NYU1 1516 aa31.08■■■□□ 2.57
GTF2IRD2B-208ENST00000619142 CFAP43Q8NDM7 1665 aa31.03■■■□□ 2.56
GTF2IRD2B-208ENST00000619142 CEP170Q5SW79 1584 aa31.01■■■□□ 2.55
GTF2IRD2B-208ENST00000619142 FBLN2P98095 1184 aa30.98■■■□□ 2.55
GTF2IRD2B-208ENST00000619142 NUP160Q12769 1436 aa30.98■■■□□ 2.55
GTF2IRD2B-208ENST00000619142 LRRC9Q6ZRR7 1453 aa30.95■■■□□ 2.55
GTF2IRD2B-208ENST00000619142 ATP1B4Q9UN42 357 aaPredicted RBP30.94■■■□□ 2.54
GTF2IRD2B-208ENST00000619142 KIAA0556O60303 1618 aa30.9■■■□□ 2.54
GTF2IRD2B-208ENST00000619142 DISP1Q96F81 1524 aa30.89■■■□□ 2.54
GTF2IRD2B-208ENST00000619142 RRBP1Q9P2E9 1410 aaKnown RBP30.83■■■□□ 2.53
GTF2IRD2B-208ENST00000619142 LRRIQ1Q96JM4 1722 aa30.82■■■□□ 2.52
GTF2IRD2B-208ENST00000619142 CHD1O14646 1710 aa30.79■■■□□ 2.52
GTF2IRD2B-208ENST00000619142 HECW1Q76N89 1606 aa30.79■■■□□ 2.52
GTF2IRD2B-208ENST00000619142 JPH4Q96JJ6 628 aa30.76■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 CCDC18Q5T9S5 1454 aa30.75■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 CARMIL2Q6F5E8 1435 aa30.73■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 HNRNPUL2Q1KMD3 747 aaKnown RBP30.72■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 CCNB3Q8WWL7 1395 aa30.71■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 ZEB1P37275 1124 aaPredicted RBP30.71■■■□□ 2.51
GTF2IRD2B-208ENST00000619142 MTUS2Q5JR59 1369 aa30.68■■■□□ 2.5
GTF2IRD2B-208ENST00000619142 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
GTF2IRD2B-208ENST00000619142 EPRSP07814 1512 aaKnown RBP30.66■■■□□ 2.5
GTF2IRD2B-208ENST00000619142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.64■■■□□ 2.5
GTF2IRD2B-208ENST00000619142 EHBP1L1Q8N3D4 1523 aa30.63■■■□□ 2.49
GTF2IRD2B-208ENST00000619142 RAPGEF6Q8TEU7 1601 aa30.63■■■□□ 2.49
GTF2IRD2B-208ENST00000619142 CCER1Q8TC90 406 aaPredicted RBP30.57■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 SUPT6HQ7KZ85 1726 aaKnown RBP30.57■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 CDK13Q14004 1512 aaKnown RBP30.56■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 MAGI3Q5TCQ9 1506 aa30.55■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 NUP153P49790 1475 aaKnown RBP30.55■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 PRG4Q92954 1404 aaPredicted RBP30.53■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 SHROOM2Q13796 1616 aa30.53■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 NCOA2Q15596 1464 aa30.52■■■□□ 2.48
GTF2IRD2B-208ENST00000619142 PLB1Q6P1J6 1458 aa30.49■■■□□ 2.47
GTF2IRD2B-208ENST00000619142 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
GTF2IRD2B-208ENST00000619142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.47■■■□□ 2.47
GTF2IRD2B-208ENST00000619142 FGD6Q6ZV73 1430 aa30.45■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 ABCA8O94911 1581 aa30.43■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 MYOM3Q5VTT5 1437 aa30.43■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 ARID3CA6NKF2 412 aa30.42■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 FAM50AQ14320 339 aaKnown RBP30.41■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 CDK11AQ9UQ88 783 aaPredicted RBP30.39■■■□□ 2.46
GTF2IRD2B-208ENST00000619142 PTPRGP23470 1445 aa30.38■■■□□ 2.45
GTF2IRD2B-208ENST00000619142 ITGAEP38570 1179 aa30.37■■■□□ 2.45
GTF2IRD2B-208ENST00000619142 TROQ12816 1431 aaPredicted RBP30.28■■■□□ 2.44
GTF2IRD2B-208ENST00000619142 ERCC6L2Q5T890 1561 aa30.27■■■□□ 2.44
GTF2IRD2B-208ENST00000619142 PTPN23Q9H3S7 1636 aa30.27■■■□□ 2.44
GTF2IRD2B-208ENST00000619142 MIA2Q96PC5 1412 aa30.24■■■□□ 2.43
GTF2IRD2B-208ENST00000619142 ATP10BO94823 1461 aa30.24■■■□□ 2.43
GTF2IRD2B-208ENST00000619142 TCOF1Q13428 1488 aaKnown RBP30.23■■■□□ 2.43
GTF2IRD2B-208ENST00000619142 ADCY10Q96PN6 1610 aa30.21■■■□□ 2.43
GTF2IRD2B-208ENST00000619142 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
GTF2IRD2B-208ENST00000619142 SETD5Q9C0A6 1442 aa30.19■■■□□ 2.42
GTF2IRD2B-208ENST00000619142 RAB3GAP2Q9H2M9 1393 aa30.16■■■□□ 2.42
GTF2IRD2B-208ENST00000619142 PLEKHD1A6NEE1 506 aa30.15■■■□□ 2.42
GTF2IRD2B-208ENST00000619142 DHX57Q6P158 1386 aaKnown RBP30.14■■■□□ 2.42
GTF2IRD2B-208ENST00000619142 ABCC2Q92887 1545 aa30.12■■■□□ 2.41
GTF2IRD2B-208ENST00000619142 KIF14Q15058 1648 aa30.12■■■□□ 2.41
GTF2IRD2B-208ENST00000619142 CLSPNQ9HAW4 1339 aa30.11■■■□□ 2.41
GTF2IRD2B-208ENST00000619142 PTPRKQ15262 1439 aa30.1■■■□□ 2.41
GTF2IRD2B-208ENST00000619142 ITSN2Q9NZM3 1697 aa30.09■■■□□ 2.41
GTF2IRD2B-208ENST00000619142 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
GTF2IRD2B-208ENST00000619142 GPATCH8Q9UKJ3 1502 aaKnown RBP30.03■■■□□ 2.4
GTF2IRD2B-208ENST00000619142 UHRF1BP1LA0JNW5 1464 aa30.03■■■□□ 2.4
GTF2IRD2B-208ENST00000619142 HFM1A2PYH4 1435 aa30.02■■■□□ 2.4
GTF2IRD2B-208ENST00000619142 ABCC10Q5T3U5 1492 aa30.01■■■□□ 2.39
GTF2IRD2B-208ENST00000619142 CFDP1Q9UEE9 299 aaPredicted RBP29.96■■■□□ 2.39
GTF2IRD2B-208ENST00000619142 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
GTF2IRD2B-208ENST00000619142 DNMT1P26358 1616 aaKnown RBP29.94■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 NAIPQ13075 1403 aa29.94■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 AKNAQ7Z591 1439 aa29.93■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 CAMSAP2Q08AD1 1489 aa29.92■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 ZNF644Q9H582 1327 aaPredicted RBP29.92■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 DAPK1P53355 1430 aa29.92■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 KDM5BQ9UGL1 1544 aa29.91■■■□□ 2.38
GTF2IRD2B-208ENST00000619142 ZCCHC11Q5TAX3 1644 aaKnown RBP29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms