RNA–Protein interactions for RNA: ENST00000614721.1

ACSM3-215, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best)

Gene ACSM3, Length 3,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-215ENST00000614721 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.28
ACSM3-215ENST00000614721 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
ACSM3-215ENST00000614721 WDR62O43379 1518 aa13.26□□□□□ -0.29
ACSM3-215ENST00000614721 IFT140Q96RY7 1462 aa13.26□□□□□ -0.29
ACSM3-215ENST00000614721 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
ACSM3-215ENST00000614721 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
ACSM3-215ENST00000614721 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
ACSM3-215ENST00000614721 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
ACSM3-215ENST00000614721 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
ACSM3-215ENST00000614721 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
ACSM3-215ENST00000614721 EIF4G3O43432 1585 aaKnown RBP13.18□□□□□ -0.3
ACSM3-215ENST00000614721 HRCP23327 699 aa13.16□□□□□ -0.3
ACSM3-215ENST00000614721 CCER1Q8TC90 406 aaPredicted RBP13.16□□□□□ -0.3
ACSM3-215ENST00000614721 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
ACSM3-215ENST00000614721 CUL7Q14999 1698 aa13.14□□□□□ -0.31
ACSM3-215ENST00000614721 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
ACSM3-215ENST00000614721 PBRM1Q86U86 1689 aa13.13□□□□□ -0.31
ACSM3-215ENST00000614721 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
ACSM3-215ENST00000614721 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
ACSM3-215ENST00000614721 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
ACSM3-215ENST00000614721 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
ACSM3-215ENST00000614721 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
ACSM3-215ENST00000614721 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
ACSM3-215ENST00000614721 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
ACSM3-215ENST00000614721 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.32
ACSM3-215ENST00000614721 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
ACSM3-215ENST00000614721 KIAA0586Q9BVV6 1533 aa13□□□□□ -0.33
ACSM3-215ENST00000614721 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
ACSM3-215ENST00000614721 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
ACSM3-215ENST00000614721 CHIC2Q9UKJ5 165 aa12.98□□□□□ -0.33
ACSM3-215ENST00000614721 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
ACSM3-215ENST00000614721 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
ACSM3-215ENST00000614721 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.33
ACSM3-215ENST00000614721 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.33
ACSM3-215ENST00000614721 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
ACSM3-215ENST00000614721 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.34
ACSM3-215ENST00000614721 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.34
ACSM3-215ENST00000614721 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
ACSM3-215ENST00000614721 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
ACSM3-215ENST00000614721 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
ACSM3-215ENST00000614721 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
ACSM3-215ENST00000614721 CARMIL2Q6F5E8 1435 aa12.92□□□□□ -0.34
ACSM3-215ENST00000614721 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
ACSM3-215ENST00000614721 NUP160Q12769 1436 aa12.9□□□□□ -0.34
ACSM3-215ENST00000614721 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
ACSM3-215ENST00000614721 PTPRGP23470 1445 aa12.89□□□□□ -0.35
ACSM3-215ENST00000614721 ZNF644Q9H582 1327 aaPredicted RBP12.89□□□□□ -0.35
ACSM3-215ENST00000614721 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
ACSM3-215ENST00000614721 CHD1O14646 1710 aa12.88□□□□□ -0.35
ACSM3-215ENST00000614721 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
ACSM3-215ENST00000614721 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
ACSM3-215ENST00000614721 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
ACSM3-215ENST00000614721 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
ACSM3-215ENST00000614721 EPRSP07814 1512 aaKnown RBP12.86□□□□□ -0.35
ACSM3-215ENST00000614721 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
ACSM3-215ENST00000614721 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
ACSM3-215ENST00000614721 NCOA2Q15596 1464 aa12.83□□□□□ -0.35
ACSM3-215ENST00000614721 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
ACSM3-215ENST00000614721 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
ACSM3-215ENST00000614721 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
ACSM3-215ENST00000614721 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
ACSM3-215ENST00000614721 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
ACSM3-215ENST00000614721 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
ACSM3-215ENST00000614721 LRRIQ1Q96JM4 1722 aa12.81□□□□□ -0.36
ACSM3-215ENST00000614721 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
ACSM3-215ENST00000614721 FGD6Q6ZV73 1430 aa12.79□□□□□ -0.36
ACSM3-215ENST00000614721 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
ACSM3-215ENST00000614721 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.36
ACSM3-215ENST00000614721 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.36
ACSM3-215ENST00000614721 HECW1Q76N89 1606 aa12.77□□□□□ -0.36
ACSM3-215ENST00000614721 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
ACSM3-215ENST00000614721 RAPGEF6Q8TEU7 1601 aa12.75□□□□□ -0.37
ACSM3-215ENST00000614721 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
ACSM3-215ENST00000614721 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
ACSM3-215ENST00000614721 MAP3K1Q13233 1512 aa12.75□□□□□ -0.37
ACSM3-215ENST00000614721 ATP10BO94823 1461 aa12.74□□□□□ -0.37
ACSM3-215ENST00000614721 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
ACSM3-215ENST00000614721 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
ACSM3-215ENST00000614721 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
ACSM3-215ENST00000614721 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
ACSM3-215ENST00000614721 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
ACSM3-215ENST00000614721 FOXD1Q16676 465 aa12.72□□□□□ -0.37
ACSM3-215ENST00000614721 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.38
ACSM3-215ENST00000614721 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
ACSM3-215ENST00000614721 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
ACSM3-215ENST00000614721 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
ACSM3-215ENST00000614721 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
ACSM3-215ENST00000614721 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
ACSM3-215ENST00000614721 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
ACSM3-215ENST00000614721 KIF14Q15058 1648 aa12.67□□□□□ -0.38
ACSM3-215ENST00000614721 ABCA8O94911 1581 aa12.63□□□□□ -0.39
ACSM3-215ENST00000614721 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
ACSM3-215ENST00000614721 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
ACSM3-215ENST00000614721 PTPN23Q9H3S7 1636 aa12.63□□□□□ -0.39
ACSM3-215ENST00000614721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.395e-6■■■□□ 16
ACSM3-215ENST00000614721 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
ACSM3-215ENST00000614721 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
ACSM3-215ENST00000614721 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
ACSM3-215ENST00000614721 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
ACSM3-215ENST00000614721 NAIPQ13075 1403 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms