RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.97
SEMA6C-209ENST00000613223 ZEB1P37275 1124 aaPredicted RBP27.38■■□□□ 1.97
SEMA6C-209ENST00000613223 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
SEMA6C-209ENST00000613223 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
SEMA6C-209ENST00000613223 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
SEMA6C-209ENST00000613223 ZNF608Q9ULD9 1512 aaPredicted RBP27.32■■□□□ 1.96
SEMA6C-209ENST00000613223 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
SEMA6C-209ENST00000613223 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
SEMA6C-209ENST00000613223 FHOD3Q2V2M9 1422 aa27.26■■□□□ 1.95
SEMA6C-209ENST00000613223 TIAM1Q13009 1591 aa27.25■■□□□ 1.95
SEMA6C-209ENST00000613223 SAMD9Q5K651 1589 aa27.25■■□□□ 1.95
SEMA6C-209ENST00000613223 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
SEMA6C-209ENST00000613223 PCF11O94913 1555 aaKnown RBP27.24■■□□□ 1.95
SEMA6C-209ENST00000613223 P3H3Q8IVL6 736 aa27.21■■□□□ 1.95
SEMA6C-209ENST00000613223 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
SEMA6C-209ENST00000613223 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
SEMA6C-209ENST00000613223 FMN1Q68DA7 1419 aa27.17■■□□□ 1.94
SEMA6C-209ENST00000613223 CASKIN1Q8WXD9 1431 aa27.16■■□□□ 1.94
SEMA6C-209ENST00000613223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.15■■□□□ 1.94
SEMA6C-209ENST00000613223 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
SEMA6C-209ENST00000613223 IQGAP2Q13576 1575 aa27.14■■□□□ 1.94
SEMA6C-209ENST00000613223 CCER1Q8TC90 406 aaPredicted RBP27.11■■□□□ 1.93
SEMA6C-209ENST00000613223 LRRC9Q6ZRR7 1453 aa27.11■■□□□ 1.93
SEMA6C-209ENST00000613223 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
SEMA6C-209ENST00000613223 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
SEMA6C-209ENST00000613223 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
SEMA6C-209ENST00000613223 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
SEMA6C-209ENST00000613223 UGGT2Q9NYU1 1516 aa27.01■■□□□ 1.91
SEMA6C-209ENST00000613223 KIAA0586Q9BVV6 1533 aa27■■□□□ 1.91
SEMA6C-209ENST00000613223 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
SEMA6C-209ENST00000613223 SYNJ2O15056 1496 aa26.99■■□□□ 1.91
SEMA6C-209ENST00000613223 CCNB3Q8WWL7 1395 aa26.99■■□□□ 1.91
SEMA6C-209ENST00000613223 LRRIQ1Q96JM4 1722 aa26.9■■□□□ 1.9
SEMA6C-209ENST00000613223 PHLDB1Q86UU1 1377 aa26.89■■□□□ 1.9
SEMA6C-209ENST00000613223 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
SEMA6C-209ENST00000613223 CEP170Q5SW79 1584 aa26.87■■□□□ 1.89
SEMA6C-209ENST00000613223 KIAA0556O60303 1618 aa26.86■■□□□ 1.89
SEMA6C-209ENST00000613223 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
SEMA6C-209ENST00000613223 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
SEMA6C-209ENST00000613223 DISP1Q96F81 1524 aa26.84■■□□□ 1.89
SEMA6C-209ENST00000613223 NUP160Q12769 1436 aa26.82■■□□□ 1.88
SEMA6C-209ENST00000613223 MTUS2Q5JR59 1369 aa26.8■■□□□ 1.88
SEMA6C-209ENST00000613223 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
SEMA6C-209ENST00000613223 FBLN2P98095 1184 aa26.76■■□□□ 1.87
SEMA6C-209ENST00000613223 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
SEMA6C-209ENST00000613223 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
SEMA6C-209ENST00000613223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.71■■□□□ 1.87
SEMA6C-209ENST00000613223 NCOA2Q15596 1464 aa26.69■■□□□ 1.86
SEMA6C-209ENST00000613223 FGD6Q6ZV73 1430 aa26.67■■□□□ 1.86
SEMA6C-209ENST00000613223 MAGI3Q5TCQ9 1506 aa26.67■■□□□ 1.86
SEMA6C-209ENST00000613223 ITGAEP38570 1179 aa26.66■■□□□ 1.86
SEMA6C-209ENST00000613223 FAM50AQ14320 339 aaKnown RBP26.66■■□□□ 1.86
SEMA6C-209ENST00000613223 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
SEMA6C-209ENST00000613223 RAPGEF6Q8TEU7 1601 aa26.64■■□□□ 1.86
SEMA6C-209ENST00000613223 CDK13Q14004 1512 aaKnown RBP26.64■■□□□ 1.86
SEMA6C-209ENST00000613223 CARMIL2Q6F5E8 1435 aa26.64■■□□□ 1.86
SEMA6C-209ENST00000613223 MYOM3Q5VTT5 1437 aa26.62■■□□□ 1.85
SEMA6C-209ENST00000613223 DHX57Q6P158 1386 aaKnown RBP26.61■■□□□ 1.85
SEMA6C-209ENST00000613223 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
SEMA6C-209ENST00000613223 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
SEMA6C-209ENST00000613223 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
SEMA6C-209ENST00000613223 CHD1O14646 1710 aa26.56■■□□□ 1.84
SEMA6C-209ENST00000613223 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
SEMA6C-209ENST00000613223 RAB3GAP2Q9H2M9 1393 aa26.54■■□□□ 1.84
SEMA6C-209ENST00000613223 PTPN23Q9H3S7 1636 aa26.49■■□□□ 1.83
SEMA6C-209ENST00000613223 PLB1Q6P1J6 1458 aa26.49■■□□□ 1.83
SEMA6C-209ENST00000613223 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
SEMA6C-209ENST00000613223 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
SEMA6C-209ENST00000613223 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
SEMA6C-209ENST00000613223 ABCA8O94911 1581 aa26.43■■□□□ 1.82
SEMA6C-209ENST00000613223 MIA2Q96PC5 1412 aa26.43■■□□□ 1.82
SEMA6C-209ENST00000613223 PRG4Q92954 1404 aaPredicted RBP26.42■■□□□ 1.82
SEMA6C-209ENST00000613223 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
SEMA6C-209ENST00000613223 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
SEMA6C-209ENST00000613223 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
SEMA6C-209ENST00000613223 HFM1A2PYH4 1435 aa26.35■■□□□ 1.81
SEMA6C-209ENST00000613223 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.81
SEMA6C-209ENST00000613223 MAPKBP1O60336 1514 aa26.32■■□□□ 1.8
SEMA6C-209ENST00000613223 PTPRGP23470 1445 aa26.31■■□□□ 1.8
SEMA6C-209ENST00000613223 ATP10BO94823 1461 aa26.26■■□□□ 1.79
SEMA6C-209ENST00000613223 NAIPQ13075 1403 aa26.26■■□□□ 1.79
SEMA6C-209ENST00000613223 CLASP1Q7Z460 1538 aa26.25■■□□□ 1.79
SEMA6C-209ENST00000613223 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
SEMA6C-209ENST00000613223 AKNAQ7Z591 1439 aa26.24■■□□□ 1.79
SEMA6C-209ENST00000613223 KIF14Q15058 1648 aa26.24■■□□□ 1.79
SEMA6C-209ENST00000613223 GCC2Q8IWJ2 1684 aa26.21■■□□□ 1.79
SEMA6C-209ENST00000613223 ZNF316A6NFI3 1004 aaPredicted RBP26.19■■□□□ 1.78
SEMA6C-209ENST00000613223 PLEKHD1A6NEE1 506 aa26.18■■□□□ 1.78
SEMA6C-209ENST00000613223 DNMT1P26358 1616 aaKnown RBP26.18■■□□□ 1.78
SEMA6C-209ENST00000613223 UACAQ9BZF9 1416 aa26.18■■□□□ 1.78
SEMA6C-209ENST00000613223 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
SEMA6C-209ENST00000613223 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
SEMA6C-209ENST00000613223 DAPK1P53355 1430 aa26.15■■□□□ 1.78
SEMA6C-209ENST00000613223 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
SEMA6C-209ENST00000613223 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
SEMA6C-209ENST00000613223 ABCC5O15440 1437 aa26.11■■□□□ 1.77
SEMA6C-209ENST00000613223 CFDP1Q9UEE9 299 aaPredicted RBP26.11■■□□□ 1.77
SEMA6C-209ENST00000613223 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
SEMA6C-209ENST00000613223 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
SEMA6C-209ENST00000613223 SCAF1Q9H7N4 1312 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms