RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NISCHQ9Y2I1 1504 aa39.61■■■■□ 3.93
SEMA6C-209ENST00000613223 CCDC180Q9P1Z9 1646 aa34.34■■■■□ 3.09
SEMA6C-209ENST00000613223 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
SEMA6C-209ENST00000613223 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
SEMA6C-209ENST00000613223 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
SEMA6C-209ENST00000613223 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
SEMA6C-209ENST00000613223 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
SEMA6C-209ENST00000613223 ABCC9O60706 1549 aa32.11■■■□□ 2.73
SEMA6C-209ENST00000613223 NACADO15069 1562 aa31.88■■■□□ 2.69
SEMA6C-209ENST00000613223 SCRIBQ14160 1630 aa31.66■■■□□ 2.66
SEMA6C-209ENST00000613223 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
SEMA6C-209ENST00000613223 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.64
SEMA6C-209ENST00000613223 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
SEMA6C-209ENST00000613223 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
SEMA6C-209ENST00000613223 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
SEMA6C-209ENST00000613223 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
SEMA6C-209ENST00000613223 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
SEMA6C-209ENST00000613223 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
SEMA6C-209ENST00000613223 CHIC1Q5VXU3 224 aa30.45■■■□□ 2.46
SEMA6C-209ENST00000613223 WIZO95785 1651 aa30.4■■■□□ 2.46
SEMA6C-209ENST00000613223 SMARCA4P51532 1647 aa30.37■■■□□ 2.45
SEMA6C-209ENST00000613223 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.452e-6■■□□□ 14.4
SEMA6C-209ENST00000613223 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
SEMA6C-209ENST00000613223 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
SEMA6C-209ENST00000613223 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
SEMA6C-209ENST00000613223 CCDC88BA6NC98 1476 aa29.79■■■□□ 2.36
SEMA6C-209ENST00000613223 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
SEMA6C-209ENST00000613223 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
SEMA6C-209ENST00000613223 TRIM41Q8WV44 630 aa29.66■■■□□ 2.34
SEMA6C-209ENST00000613223 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
SEMA6C-209ENST00000613223 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
SEMA6C-209ENST00000613223 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
SEMA6C-209ENST00000613223 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
SEMA6C-209ENST00000613223 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
SEMA6C-209ENST00000613223 FAM9AQ8IZU1 332 aaPredicted RBP29.13■■■□□ 2.25
SEMA6C-209ENST00000613223 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
SEMA6C-209ENST00000613223 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
SEMA6C-209ENST00000613223 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
SEMA6C-209ENST00000613223 CFTRP13569 1480 aa28.9■■■□□ 2.22
SEMA6C-209ENST00000613223 EEA1Q15075 1411 aa28.87■■■□□ 2.21
SEMA6C-209ENST00000613223 SOGA1O94964 1423 aa28.85■■■□□ 2.21
SEMA6C-209ENST00000613223 TOP2BQ02880 1626 aa28.79■■■□□ 2.2
SEMA6C-209ENST00000613223 PRDM2Q13029 1718 aa28.78■■■□□ 2.2
SEMA6C-209ENST00000613223 BIVM-ERCC5R4GMW8 1640 aa28.75■■■□□ 2.19
SEMA6C-209ENST00000613223 EHMT2Q96KQ7 1210 aa28.71■■■□□ 2.19
SEMA6C-209ENST00000613223 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
SEMA6C-209ENST00000613223 CADPSQ9ULU8 1353 aa28.7■■■□□ 2.18
SEMA6C-209ENST00000613223 CSRNP3Q8WYN3 585 aa28.65■■■□□ 2.18
SEMA6C-209ENST00000613223 CUX1P39880 1505 aa28.61■■■□□ 2.17
SEMA6C-209ENST00000613223 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
SEMA6C-209ENST00000613223 KIF21BO75037 1637 aa28.48■■■□□ 2.15
SEMA6C-209ENST00000613223 TNIKQ9UKE5 1360 aa28.48■■■□□ 2.15
SEMA6C-209ENST00000613223 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
SEMA6C-209ENST00000613223 PCGF6Q9BYE7 350 aa28.41■■■□□ 2.14
SEMA6C-209ENST00000613223 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
SEMA6C-209ENST00000613223 CEP162Q5TB80 1403 aa28.37■■■□□ 2.13
SEMA6C-209ENST00000613223 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
SEMA6C-209ENST00000613223 HRCP23327 699 aa28.34■■■□□ 2.13
SEMA6C-209ENST00000613223 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
SEMA6C-209ENST00000613223 NESP48681 1621 aa28.33■■■□□ 2.13
SEMA6C-209ENST00000613223 TRIM26Q12899 539 aaPredicted RBP28.3■■■□□ 2.12
SEMA6C-209ENST00000613223 KIF27Q86VH2 1401 aa28.29■■■□□ 2.12
SEMA6C-209ENST00000613223 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
SEMA6C-209ENST00000613223 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
SEMA6C-209ENST00000613223 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
SEMA6C-209ENST00000613223 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
SEMA6C-209ENST00000613223 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
SEMA6C-209ENST00000613223 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
SEMA6C-209ENST00000613223 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
SEMA6C-209ENST00000613223 CUX2O14529 1486 aa28.13■■■□□ 2.09
SEMA6C-209ENST00000613223 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
SEMA6C-209ENST00000613223 CLIP1P30622 1438 aa28.05■■■□□ 2.08
SEMA6C-209ENST00000613223 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
SEMA6C-209ENST00000613223 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
SEMA6C-209ENST00000613223 IGF1RP08069 1367 aa27.99■■■□□ 2.07
SEMA6C-209ENST00000613223 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
SEMA6C-209ENST00000613223 KIF21AQ7Z4S6 1674 aa27.99■■■□□ 2.07
SEMA6C-209ENST00000613223 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.06
SEMA6C-209ENST00000613223 PPARGC1BQ86YN6 1023 aaKnown RBP27.89■■■□□ 2.06
SEMA6C-209ENST00000613223 VPS8Q8N3P4 1428 aa27.88■■■□□ 2.05
SEMA6C-209ENST00000613223 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
SEMA6C-209ENST00000613223 CARMIL1Q5VZK9 1371 aa27.86■■■□□ 2.05
SEMA6C-209ENST00000613223 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
SEMA6C-209ENST00000613223 CUL7Q14999 1698 aa27.75■■■□□ 2.03
SEMA6C-209ENST00000613223 RANGAP1P46060 587 aaPredicted RBP27.75■■■□□ 2.03
SEMA6C-209ENST00000613223 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
SEMA6C-209ENST00000613223 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
SEMA6C-209ENST00000613223 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
SEMA6C-209ENST00000613223 ARHGAP35Q9NRY4 1499 aa27.65■■■□□ 2.02
SEMA6C-209ENST00000613223 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
SEMA6C-209ENST00000613223 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
SEMA6C-209ENST00000613223 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
SEMA6C-209ENST00000613223 WDR62O43379 1518 aa27.59■■■□□ 2.01
SEMA6C-209ENST00000613223 APLP2Q06481 763 aa27.59■■■□□ 2.01
SEMA6C-209ENST00000613223 CTTNBP2Q8WZ74 1663 aa27.51■■□□□ 1.99
SEMA6C-209ENST00000613223 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
SEMA6C-209ENST00000613223 IFT140Q96RY7 1462 aa27.47■■□□□ 1.99
SEMA6C-209ENST00000613223 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
SEMA6C-209ENST00000613223 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
SEMA6C-209ENST00000613223 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms