RNA–Protein interactions for RNA: ENST00000612451.4

RSPO1-203, Transcript of R-spondin 1, humanhuman

TSL 1 (best) BASIC

Gene RSPO1, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-203ENST00000612451 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
RSPO1-203ENST00000612451 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
RSPO1-203ENST00000612451 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
RSPO1-203ENST00000612451 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
RSPO1-203ENST00000612451 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.49
RSPO1-203ENST00000612451 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
RSPO1-203ENST00000612451 ATP1B4Q9UN42 357 aaPredicted RBP24.33■■□□□ 1.49
RSPO1-203ENST00000612451 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.48
RSPO1-203ENST00000612451 EFCAB5A4FU69 1503 aa24.32■■□□□ 1.48
RSPO1-203ENST00000612451 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
RSPO1-203ENST00000612451 TIAM1Q13009 1591 aa24.31■■□□□ 1.48
RSPO1-203ENST00000612451 PCF11O94913 1555 aaKnown RBP24.31■■□□□ 1.48
RSPO1-203ENST00000612451 WDR62O43379 1518 aa24.3■■□□□ 1.48
RSPO1-203ENST00000612451 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
RSPO1-203ENST00000612451 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
RSPO1-203ENST00000612451 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
RSPO1-203ENST00000612451 RRBP1Q9P2E9 1410 aaKnown RBP24.22■■□□□ 1.47
RSPO1-203ENST00000612451 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
RSPO1-203ENST00000612451 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
RSPO1-203ENST00000612451 ADAMTS12P58397 1594 aa24.21■■□□□ 1.47
RSPO1-203ENST00000612451 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
RSPO1-203ENST00000612451 CFAP43Q8NDM7 1665 aa24.19■■□□□ 1.46
RSPO1-203ENST00000612451 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
RSPO1-203ENST00000612451 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
RSPO1-203ENST00000612451 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
RSPO1-203ENST00000612451 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
RSPO1-203ENST00000612451 FMN1Q68DA7 1419 aa24.16■■□□□ 1.46
RSPO1-203ENST00000612451 THOC2Q8NI27 1593 aaKnown RBP24.15■■□□□ 1.46
RSPO1-203ENST00000612451 ITGAEP38570 1179 aa24.12■■□□□ 1.45
RSPO1-203ENST00000612451 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
RSPO1-203ENST00000612451 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
RSPO1-203ENST00000612451 PHLDB1Q86UU1 1377 aa24.08■■□□□ 1.45
RSPO1-203ENST00000612451 IQGAP2Q13576 1575 aa24.08■■□□□ 1.44
RSPO1-203ENST00000612451 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
RSPO1-203ENST00000612451 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
RSPO1-203ENST00000612451 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
RSPO1-203ENST00000612451 CENPBP07199 599 aaPredicted RBP23.99■■□□□ 1.43
RSPO1-203ENST00000612451 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
RSPO1-203ENST00000612451 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
RSPO1-203ENST00000612451 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
RSPO1-203ENST00000612451 FBLN2P98095 1184 aa23.91■■□□□ 1.42
RSPO1-203ENST00000612451 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
RSPO1-203ENST00000612451 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
RSPO1-203ENST00000612451 KIAA0586Q9BVV6 1533 aa23.91■■□□□ 1.42
RSPO1-203ENST00000612451 UGGT2Q9NYU1 1516 aa23.91■■□□□ 1.42
RSPO1-203ENST00000612451 GTF3C3Q9Y5Q9 886 aa23.9■■□□□ 1.42
RSPO1-203ENST00000612451 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
RSPO1-203ENST00000612451 HECW1Q76N89 1606 aa23.85■■□□□ 1.41
RSPO1-203ENST00000612451 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
RSPO1-203ENST00000612451 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
RSPO1-203ENST00000612451 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
RSPO1-203ENST00000612451 DISP1Q96F81 1524 aa23.83■■□□□ 1.4
RSPO1-203ENST00000612451 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
RSPO1-203ENST00000612451 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
RSPO1-203ENST00000612451 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
RSPO1-203ENST00000612451 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
RSPO1-203ENST00000612451 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
RSPO1-203ENST00000612451 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
RSPO1-203ENST00000612451 SUPT6HQ7KZ85 1726 aaKnown RBP23.81■■□□□ 1.4
RSPO1-203ENST00000612451 CLSPNQ9HAW4 1339 aa23.8■■□□□ 1.4
RSPO1-203ENST00000612451 SETD5Q9C0A6 1442 aa23.8■■□□□ 1.4
RSPO1-203ENST00000612451 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
RSPO1-203ENST00000612451 CDK13Q14004 1512 aaKnown RBP23.79■■□□□ 1.4
RSPO1-203ENST00000612451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.39
RSPO1-203ENST00000612451 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
RSPO1-203ENST00000612451 MYOM3Q5VTT5 1437 aa23.74■■□□□ 1.39
RSPO1-203ENST00000612451 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
RSPO1-203ENST00000612451 NUP160Q12769 1436 aa23.7■■□□□ 1.38
RSPO1-203ENST00000612451 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
RSPO1-203ENST00000612451 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
RSPO1-203ENST00000612451 RAPGEF6Q8TEU7 1601 aa23.67■■□□□ 1.38
RSPO1-203ENST00000612451 PTPN23Q9H3S7 1636 aa23.65■■□□□ 1.38
RSPO1-203ENST00000612451 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
RSPO1-203ENST00000612451 PTPRKQ15262 1439 aa23.64■■□□□ 1.38
RSPO1-203ENST00000612451 MAPKBP1O60336 1514 aa23.62■■□□□ 1.37
RSPO1-203ENST00000612451 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
RSPO1-203ENST00000612451 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
RSPO1-203ENST00000612451 TCOF1Q13428 1488 aaKnown RBP23.54■■□□□ 1.36
RSPO1-203ENST00000612451 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
RSPO1-203ENST00000612451 HFM1A2PYH4 1435 aa23.53■■□□□ 1.36
RSPO1-203ENST00000612451 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
RSPO1-203ENST00000612451 CHD1O14646 1710 aa23.52■■□□□ 1.36
RSPO1-203ENST00000612451 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
RSPO1-203ENST00000612451 MIA2Q96PC5 1412 aa23.49■■□□□ 1.35
RSPO1-203ENST00000612451 NAIPQ13075 1403 aa23.49■■□□□ 1.35
RSPO1-203ENST00000612451 PRG4Q92954 1404 aaPredicted RBP23.49■■□□□ 1.35
RSPO1-203ENST00000612451 RRP7BPQ9NSQ0 103 aa23.48■■□□□ 1.35
RSPO1-203ENST00000612451 TROQ12816 1431 aaPredicted RBP23.44■■□□□ 1.34
RSPO1-203ENST00000612451 ABCA8O94911 1581 aa23.42■■□□□ 1.34
RSPO1-203ENST00000612451 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
RSPO1-203ENST00000612451 UACAQ9BZF9 1416 aa23.39■■□□□ 1.34
RSPO1-203ENST00000612451 KIF14Q15058 1648 aa23.39■■□□□ 1.33
RSPO1-203ENST00000612451 PTPRGP23470 1445 aa23.36■■□□□ 1.33
RSPO1-203ENST00000612451 GCC2Q8IWJ2 1684 aa23.36■■□□□ 1.33
RSPO1-203ENST00000612451 ATP10BO94823 1461 aa23.35■■□□□ 1.33
RSPO1-203ENST00000612451 DAPK1P53355 1430 aa23.34■■□□□ 1.33
RSPO1-203ENST00000612451 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
RSPO1-203ENST00000612451 KDM6BO15054 1643 aa23.33■■□□□ 1.33
RSPO1-203ENST00000612451 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.33
RSPO1-203ENST00000612451 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms