RNA–Protein interactions for RNA: ENST00000612451.4

RSPO1-203, Transcript of R-spondin 1, humanhuman

TSL 1 (best) BASIC

Gene RSPO1, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-203ENST00000612451 NISCHQ9Y2I1 1504 aa35.13■■■■□ 3.21
RSPO1-203ENST00000612451 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.43
RSPO1-203ENST00000612451 ZCCHC6Q5VYS8 1495 aaKnown RBP29.59■■■□□ 2.33
RSPO1-203ENST00000612451 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.3
RSPO1-203ENST00000612451 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
RSPO1-203ENST00000612451 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
RSPO1-203ENST00000612451 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
RSPO1-203ENST00000612451 ABCC9O60706 1549 aa28.48■■■□□ 2.15
RSPO1-203ENST00000612451 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
RSPO1-203ENST00000612451 SCRIBQ14160 1630 aa28.18■■■□□ 2.1
RSPO1-203ENST00000612451 NACADO15069 1562 aa28.1■■■□□ 2.09
RSPO1-203ENST00000612451 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
RSPO1-203ENST00000612451 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
RSPO1-203ENST00000612451 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
RSPO1-203ENST00000612451 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
RSPO1-203ENST00000612451 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
RSPO1-203ENST00000612451 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
RSPO1-203ENST00000612451 WIZO95785 1651 aa27.1■■□□□ 1.93
RSPO1-203ENST00000612451 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
RSPO1-203ENST00000612451 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
RSPO1-203ENST00000612451 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
RSPO1-203ENST00000612451 SMARCA4P51532 1647 aa26.91■■□□□ 1.9
RSPO1-203ENST00000612451 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
RSPO1-203ENST00000612451 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
RSPO1-203ENST00000612451 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
RSPO1-203ENST00000612451 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
RSPO1-203ENST00000612451 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
RSPO1-203ENST00000612451 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.83
RSPO1-203ENST00000612451 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
RSPO1-203ENST00000612451 FAM9AQ8IZU1 332 aaPredicted RBP26.37■■□□□ 1.81
RSPO1-203ENST00000612451 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
RSPO1-203ENST00000612451 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
RSPO1-203ENST00000612451 HRCP23327 699 aa26.24■■□□□ 1.79
RSPO1-203ENST00000612451 ABCC8Q09428 1581 aa26.24■■□□□ 1.79
RSPO1-203ENST00000612451 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.77
RSPO1-203ENST00000612451 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
RSPO1-203ENST00000612451 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
RSPO1-203ENST00000612451 PCGF6Q9BYE7 350 aa25.89■■□□□ 1.73
RSPO1-203ENST00000612451 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.73
RSPO1-203ENST00000612451 SOGA1O94964 1423 aa25.84■■□□□ 1.73
RSPO1-203ENST00000612451 SYNJ1O43426 1573 aa25.79■■□□□ 1.72
RSPO1-203ENST00000612451 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
RSPO1-203ENST00000612451 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
RSPO1-203ENST00000612451 PELP1Q8IZL8 1130 aaKnown RBP25.67■■□□□ 1.7
RSPO1-203ENST00000612451 EEA1Q15075 1411 aa25.66■■□□□ 1.7
RSPO1-203ENST00000612451 CSRNP3Q8WYN3 585 aa25.65■■□□□ 1.7
RSPO1-203ENST00000612451 TRIM26Q12899 539 aaPredicted RBP25.59■■□□□ 1.69
RSPO1-203ENST00000612451 CFTRP13569 1480 aa25.56■■□□□ 1.68
RSPO1-203ENST00000612451 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
RSPO1-203ENST00000612451 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
RSPO1-203ENST00000612451 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
RSPO1-203ENST00000612451 TNIKQ9UKE5 1360 aa25.45■■□□□ 1.66
RSPO1-203ENST00000612451 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
RSPO1-203ENST00000612451 CUX1P39880 1505 aa25.43■■□□□ 1.66
RSPO1-203ENST00000612451 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
RSPO1-203ENST00000612451 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
RSPO1-203ENST00000612451 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
RSPO1-203ENST00000612451 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
RSPO1-203ENST00000612451 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
RSPO1-203ENST00000612451 KIF21BO75037 1637 aa25.35■■□□□ 1.65
RSPO1-203ENST00000612451 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
RSPO1-203ENST00000612451 NESP48681 1621 aa25.17■■□□□ 1.62
RSPO1-203ENST00000612451 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
RSPO1-203ENST00000612451 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
RSPO1-203ENST00000612451 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
RSPO1-203ENST00000612451 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
RSPO1-203ENST00000612451 CLIP1P30622 1438 aa25.11■■□□□ 1.61
RSPO1-203ENST00000612451 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
RSPO1-203ENST00000612451 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
RSPO1-203ENST00000612451 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.61
RSPO1-203ENST00000612451 ERICH3Q5RHP9 1530 aa25.05■■□□□ 1.6
RSPO1-203ENST00000612451 CUX2O14529 1486 aa25.05■■□□□ 1.6
RSPO1-203ENST00000612451 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
RSPO1-203ENST00000612451 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
RSPO1-203ENST00000612451 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
RSPO1-203ENST00000612451 IGF1RP08069 1367 aa24.92■■□□□ 1.58
RSPO1-203ENST00000612451 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
RSPO1-203ENST00000612451 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
RSPO1-203ENST00000612451 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
RSPO1-203ENST00000612451 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
RSPO1-203ENST00000612451 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
RSPO1-203ENST00000612451 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
RSPO1-203ENST00000612451 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
RSPO1-203ENST00000612451 MYT1Q01538 1121 aa24.8■■□□□ 1.56
RSPO1-203ENST00000612451 KIF21AQ7Z4S6 1674 aa24.79■■□□□ 1.56
RSPO1-203ENST00000612451 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
RSPO1-203ENST00000612451 APLP2Q06481 763 aa24.78■■□□□ 1.56
RSPO1-203ENST00000612451 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
RSPO1-203ENST00000612451 SCAF1Q9H7N4 1312 aaKnown RBP24.72■■□□□ 1.55
RSPO1-203ENST00000612451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
RSPO1-203ENST00000612451 ARHGAP35Q9NRY4 1499 aa24.68■■□□□ 1.54
RSPO1-203ENST00000612451 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
RSPO1-203ENST00000612451 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
RSPO1-203ENST00000612451 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
RSPO1-203ENST00000612451 CUL7Q14999 1698 aa24.57■■□□□ 1.52
RSPO1-203ENST00000612451 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
RSPO1-203ENST00000612451 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
RSPO1-203ENST00000612451 KANK4Q5T7N3 995 aaPredicted RBP24.52■■□□□ 1.52
RSPO1-203ENST00000612451 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
RSPO1-203ENST00000612451 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms