RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 SNAPC4Q5SXM2 1469 aa31.23■■■□□ 2.59
PNKP-214ENST00000600573 CTTNBP2Q8WZ74 1663 aa31.23■■■□□ 2.59
PNKP-214ENST00000600573 ARAP1Q96P48 1450 aa31.23■■■□□ 2.59
PNKP-214ENST00000600573 EFCAB5A4FU69 1503 aa31.19■■■□□ 2.58
PNKP-214ENST00000600573 APLP2Q06481 763 aa31.15■■■□□ 2.58
PNKP-214ENST00000600573 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
PNKP-214ENST00000600573 GRIN2AQ12879 1464 aa31.1■■■□□ 2.57
PNKP-214ENST00000600573 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
PNKP-214ENST00000600573 KIAA0586Q9BVV6 1533 aa31.03■■■□□ 2.56
PNKP-214ENST00000600573 IQGAP2Q13576 1575 aa31.01■■■□□ 2.55
PNKP-214ENST00000600573 SAMD9Q5K651 1589 aa30.98■■■□□ 2.55
PNKP-214ENST00000600573 FMN1Q68DA7 1419 aa30.95■■■□□ 2.55
PNKP-214ENST00000600573 PPARGC1BQ86YN6 1023 aaKnown RBP30.93■■■□□ 2.54
PNKP-214ENST00000600573 UGGT2Q9NYU1 1516 aa30.92■■■□□ 2.54
PNKP-214ENST00000600573 NUP160Q12769 1436 aa30.91■■■□□ 2.54
PNKP-214ENST00000600573 MAP3K1Q13233 1512 aa30.9■■■□□ 2.54
PNKP-214ENST00000600573 FHOD3Q2V2M9 1422 aa30.9■■■□□ 2.54
PNKP-214ENST00000600573 FBLN2P98095 1184 aa30.9■■■□□ 2.54
PNKP-214ENST00000600573 P3H3Q8IVL6 736 aa30.9■■■□□ 2.54
PNKP-214ENST00000600573 CASKIN1Q8WXD9 1431 aa30.84■■■□□ 2.53
PNKP-214ENST00000600573 FYCO1Q9BQS8 1478 aa30.82■■■□□ 2.52
PNKP-214ENST00000600573 CEP170Q5SW79 1584 aa30.81■■■□□ 2.52
PNKP-214ENST00000600573 HRCP23327 699 aa30.8■■■□□ 2.52
PNKP-214ENST00000600573 JPH4Q96JJ6 628 aa30.72■■■□□ 2.51
PNKP-214ENST00000600573 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
PNKP-214ENST00000600573 TIAM1Q13009 1591 aa30.7■■■□□ 2.5
PNKP-214ENST00000600573 DISP1Q96F81 1524 aa30.69■■■□□ 2.5
PNKP-214ENST00000600573 CARMIL2Q6F5E8 1435 aa30.69■■■□□ 2.5
PNKP-214ENST00000600573 KIAA0556O60303 1618 aa30.67■■■□□ 2.5
PNKP-214ENST00000600573 TTBK1Q5TCY1 1321 aaPredicted RBP30.66■■■□□ 2.5
PNKP-214ENST00000600573 KANK4Q5T7N3 995 aaPredicted RBP30.65■■■□□ 2.5
PNKP-214ENST00000600573 ATP1B4Q9UN42 357 aaPredicted RBP30.62■■■□□ 2.49
PNKP-214ENST00000600573 CHD1O14646 1710 aa30.61■■■□□ 2.49
PNKP-214ENST00000600573 LRRC9Q6ZRR7 1453 aa30.6■■■□□ 2.49
PNKP-214ENST00000600573 CFAP43Q8NDM7 1665 aa30.58■■■□□ 2.49
PNKP-214ENST00000600573 CCDC18Q5T9S5 1454 aa30.55■■■□□ 2.48
PNKP-214ENST00000600573 HECW1Q76N89 1606 aa30.52■■■□□ 2.48
PNKP-214ENST00000600573 PRG4Q92954 1404 aaPredicted RBP30.44■■■□□ 2.46
PNKP-214ENST00000600573 RRBP1Q9P2E9 1410 aaKnown RBP30.43■■■□□ 2.46
PNKP-214ENST00000600573 SHROOM2Q13796 1616 aa30.42■■■□□ 2.46
PNKP-214ENST00000600573 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
PNKP-214ENST00000600573 EPRSP07814 1512 aaKnown RBP30.41■■■□□ 2.46
PNKP-214ENST00000600573 RAPGEF6Q8TEU7 1601 aa30.38■■■□□ 2.45
PNKP-214ENST00000600573 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
PNKP-214ENST00000600573 EHBP1L1Q8N3D4 1523 aa30.34■■■□□ 2.45
PNKP-214ENST00000600573 CDK11AQ9UQ88 783 aaPredicted RBP30.33■■■□□ 2.45
PNKP-214ENST00000600573 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
PNKP-214ENST00000600573 PTPRGP23470 1445 aa30.32■■■□□ 2.44
PNKP-214ENST00000600573 LRRIQ1Q96JM4 1722 aa30.32■■■□□ 2.44
PNKP-214ENST00000600573 ZEB1P37275 1124 aaPredicted RBP30.32■■■□□ 2.44
PNKP-214ENST00000600573 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
PNKP-214ENST00000600573 OSCARQ8IYS5 282 aa30.28■■■□□ 2.44
PNKP-214ENST00000600573 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
PNKP-214ENST00000600573 ABCA8O94911 1581 aa30.26■■■□□ 2.43
PNKP-214ENST00000600573 PHLDB1Q86UU1 1377 aa30.26■■■□□ 2.43
PNKP-214ENST00000600573 PLB1Q6P1J6 1458 aa30.26■■■□□ 2.43
PNKP-214ENST00000600573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.24■■■□□ 2.43
PNKP-214ENST00000600573 SUPT6HQ7KZ85 1726 aaKnown RBP30.22■■■□□ 2.43
PNKP-214ENST00000600573 CDK13Q14004 1512 aaKnown RBP30.2■■■□□ 2.43
PNKP-214ENST00000600573 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
PNKP-214ENST00000600573 ARHGEF11O15085 1522 aa30.16■■■□□ 2.42
PNKP-214ENST00000600573 HNRNPUL2Q1KMD3 747 aaKnown RBP30.16■■■□□ 2.42
PNKP-214ENST00000600573 MAGI3Q5TCQ9 1506 aa30.16■■■□□ 2.42
PNKP-214ENST00000600573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.15■■■□□ 2.42
PNKP-214ENST00000600573 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
PNKP-214ENST00000600573 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
PNKP-214ENST00000600573 FGD6Q6ZV73 1430 aa30.1■■■□□ 2.41
PNKP-214ENST00000600573 TROQ12816 1431 aaPredicted RBP30.1■■■□□ 2.41
PNKP-214ENST00000600573 ATP10BO94823 1461 aa30.08■■■□□ 2.41
PNKP-214ENST00000600573 PLEKHD1A6NEE1 506 aa30.07■■■□□ 2.4
PNKP-214ENST00000600573 ARID3CA6NKF2 412 aa30.07■■■□□ 2.4
PNKP-214ENST00000600573 ERCC6L2Q5T890 1561 aa30.06■■■□□ 2.4
PNKP-214ENST00000600573 CCER1Q8TC90 406 aaPredicted RBP30.05■■■□□ 2.4
PNKP-214ENST00000600573 MIA2Q96PC5 1412 aa30.05■■■□□ 2.4
PNKP-214ENST00000600573 FAM50AQ14320 339 aaKnown RBP30.03■■■□□ 2.4
PNKP-214ENST00000600573 UHRF1BP1LA0JNW5 1464 aa30.03■■■□□ 2.4
PNKP-214ENST00000600573 ABCC2Q92887 1545 aa30.01■■■□□ 2.39
PNKP-214ENST00000600573 ADCY10Q96PN6 1610 aa29.95■■■□□ 2.39
PNKP-214ENST00000600573 TCOF1Q13428 1488 aaKnown RBP29.94■■■□□ 2.38
PNKP-214ENST00000600573 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
PNKP-214ENST00000600573 ITGAEP38570 1179 aa29.89■■■□□ 2.37
PNKP-214ENST00000600573 KDM5BQ9UGL1 1544 aa29.85■■■□□ 2.37
PNKP-214ENST00000600573 KIF14Q15058 1648 aa29.85■■■□□ 2.37
PNKP-214ENST00000600573 GPATCH8Q9UKJ3 1502 aaKnown RBP29.8■■■□□ 2.36
PNKP-214ENST00000600573 SETD5Q9C0A6 1442 aa29.8■■■□□ 2.36
PNKP-214ENST00000600573 ITSN2Q9NZM3 1697 aa29.8■■■□□ 2.36
PNKP-214ENST00000600573 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
PNKP-214ENST00000600573 ABCC10Q5T3U5 1492 aa29.78■■■□□ 2.36
PNKP-214ENST00000600573 CLSPNQ9HAW4 1339 aa29.74■■■□□ 2.35
PNKP-214ENST00000600573 ZCCHC11Q5TAX3 1644 aaKnown RBP29.71■■■□□ 2.35
PNKP-214ENST00000600573 RAB3GAP2Q9H2M9 1393 aa29.69■■■□□ 2.34
PNKP-214ENST00000600573 HFM1A2PYH4 1435 aa29.67■■■□□ 2.34
PNKP-214ENST00000600573 PTPRKQ15262 1439 aa29.67■■■□□ 2.34
PNKP-214ENST00000600573 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
PNKP-214ENST00000600573 ACIN1Q9UKV3 1341 aaKnown RBP29.66■■■□□ 2.34
PNKP-214ENST00000600573 RIMBP3CA6NJZ7 1639 aa29.66■■■□□ 2.34
PNKP-214ENST00000600573 RIMBP3BA6NNM3 1639 aa29.66■■■□□ 2.34
PNKP-214ENST00000600573 RIMBP3Q9UFD9 1639 aa29.66■■■□□ 2.34
PNKP-214ENST00000600573 NPM1P06748 294 aaKnown RBP eCLIP29.63■■■□□ 2.33
PNKP-214ENST00000600573 CAMSAP2Q08AD1 1489 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms