RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
LIG1-214ENST00000597146 MAPKBP1O60336 1514 aa28.42■■■□□ 2.14
LIG1-214ENST00000597146 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
LIG1-214ENST00000597146 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.14
LIG1-214ENST00000597146 KDM4FA0A1W2PPD8 638 aa28.39■■■□□ 2.14
LIG1-214ENST00000597146 TSPOAP1O95153 1857 aa28.39■■■□□ 2.14
LIG1-214ENST00000597146 ADCY10Q96PN6 1610 aa28.39■■■□□ 2.13
LIG1-214ENST00000597146 ILDR1Q86SU0 546 aaPredicted RBP28.35■■■□□ 2.13
LIG1-214ENST00000597146 JPH4Q96JJ6 628 aa28.32■■■□□ 2.12
LIG1-214ENST00000597146 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.11
LIG1-214ENST00000597146 PPRC1Q5VV67 1664 aaKnown RBP28.09■■■□□ 2.09
LIG1-214ENST00000597146 ADGRL1O94910 1474 aa28.06■■■□□ 2.08
LIG1-214ENST00000597146 KIAA0586Q9BVV6 1533 aa28.02■■■□□ 2.08
LIG1-214ENST00000597146 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
LIG1-214ENST00000597146 HECW2Q9P2P5 1572 aa27.98■■■□□ 2.07
LIG1-214ENST00000597146 CUL7Q14999 1698 aa27.94■■■□□ 2.06
LIG1-214ENST00000597146 GLI2P10070 1586 aa27.92■■■□□ 2.06
LIG1-214ENST00000597146 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
LIG1-214ENST00000597146 ASXL2Q76L83 1435 aa27.9■■■□□ 2.06
LIG1-214ENST00000597146 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
LIG1-214ENST00000597146 PTPRGP23470 1445 aa27.89■■■□□ 2.06
LIG1-214ENST00000597146 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
LIG1-214ENST00000597146 PLB1Q6P1J6 1458 aa27.84■■■□□ 2.05
LIG1-214ENST00000597146 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
LIG1-214ENST00000597146 IGF1RP08069 1367 aa27.81■■■□□ 2.04
LIG1-214ENST00000597146 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
LIG1-214ENST00000597146 EPRSP07814 1512 aaKnown RBP27.74■■■□□ 2.03
LIG1-214ENST00000597146 UHRF1BP1LA0JNW5 1464 aa27.74■■■□□ 2.03
LIG1-214ENST00000597146 CARMIL2Q6F5E8 1435 aa27.74■■■□□ 2.03
LIG1-214ENST00000597146 KIF27Q86VH2 1401 aa27.74■■■□□ 2.03
LIG1-214ENST00000597146 IQGAP2Q13576 1575 aa27.72■■■□□ 2.03
LIG1-214ENST00000597146 ZCCHC11Q5TAX3 1644 aaKnown RBP27.7■■■□□ 2.02
LIG1-214ENST00000597146 TEX14Q8IWB6 1497 aa27.69■■■□□ 2.02
LIG1-214ENST00000597146 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
LIG1-214ENST00000597146 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
LIG1-214ENST00000597146 DISP1Q96F81 1524 aa27.63■■■□□ 2.01
LIG1-214ENST00000597146 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
LIG1-214ENST00000597146 KIF21BO75037 1637 aa27.53■■■□□ 2
LIG1-214ENST00000597146 KIAA0556O60303 1618 aa27.52■■■□□ 2
LIG1-214ENST00000597146 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
LIG1-214ENST00000597146 UGGT2Q9NYU1 1516 aa27.48■■□□□ 1.99
LIG1-214ENST00000597146 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
LIG1-214ENST00000597146 FBXO41Q8TF61 875 aa27.46■■□□□ 1.99
LIG1-214ENST00000597146 MAGI3Q5TCQ9 1506 aa27.41■■□□□ 1.98
LIG1-214ENST00000597146 CD109Q6YHK3 1445 aa27.38■■□□□ 1.97
LIG1-214ENST00000597146 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
LIG1-214ENST00000597146 CTTNBP2Q8WZ74 1663 aa27.3■■□□□ 1.96
LIG1-214ENST00000597146 ABCA8O94911 1581 aa27.29■■□□□ 1.96
LIG1-214ENST00000597146 ADAMTSL3P82987 1691 aa27.29■■□□□ 1.96
LIG1-214ENST00000597146 KCNH8Q96L42 1107 aa27.27■■□□□ 1.96
LIG1-214ENST00000597146 PTPRMP28827 1452 aa27.25■■□□□ 1.95
LIG1-214ENST00000597146 ARAP3Q8WWN8 1544 aa27.22■■□□□ 1.95
LIG1-214ENST00000597146 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
LIG1-214ENST00000597146 MADDQ8WXG6 1647 aa27.17■■□□□ 1.94
LIG1-214ENST00000597146 BCORL1Q5H9F3 1711 aa27.16■■□□□ 1.94
LIG1-214ENST00000597146 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
LIG1-214ENST00000597146 LMTK3Q96Q04 1460 aa27.12■■□□□ 1.93
LIG1-214ENST00000597146 ABCA9Q8IUA7 1624 aa27.1■■□□□ 1.93
LIG1-214ENST00000597146 FRMPD1Q5SYB0 1578 aa27.08■■□□□ 1.93
LIG1-214ENST00000597146 RIMS1Q86UR5 1692 aaKnown RBP27.07■■□□□ 1.92
LIG1-214ENST00000597146 ARID3CA6NKF2 412 aa27.05■■□□□ 1.92
LIG1-214ENST00000597146 RAPGEF3O95398 923 aa27.01■■□□□ 1.91
LIG1-214ENST00000597146 ATP10BO94823 1461 aa27■■□□□ 1.91
LIG1-214ENST00000597146 PHLDB1Q86UU1 1377 aa26.96■■□□□ 1.91
LIG1-214ENST00000597146 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.91
LIG1-214ENST00000597146 ARID4BQ4LE39 1312 aaPredicted RBP26.95■■□□□ 1.91
LIG1-214ENST00000597146 NEO1Q92859 1461 aa26.95■■□□□ 1.91
LIG1-214ENST00000597146 HSPA2P54652 639 aa26.91■■□□□ 1.9
LIG1-214ENST00000597146 RICTORQ6R327 1708 aa26.9■■□□□ 1.9
LIG1-214ENST00000597146 SIGLEC1Q9BZZ2 1709 aa26.88■■□□□ 1.89
LIG1-214ENST00000597146 RAPGEF6Q8TEU7 1601 aa26.87■■□□□ 1.89
LIG1-214ENST00000597146 P3H3Q8IVL6 736 aa26.85■■□□□ 1.89
LIG1-214ENST00000597146 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
LIG1-214ENST00000597146 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
LIG1-214ENST00000597146 CERKQ8TCT0 537 aa26.81■■□□□ 1.88
LIG1-214ENST00000597146 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
LIG1-214ENST00000597146 FER1L4A9Z1Z3 1794 aa26.79■■□□□ 1.88
LIG1-214ENST00000597146 ILDR2Q71H61 639 aa26.77■■□□□ 1.88
LIG1-214ENST00000597146 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.87
LIG1-214ENST00000597146 FANCAO15360 1455 aa26.75■■□□□ 1.87
LIG1-214ENST00000597146 CFAP74Q9C0B2 1584 aa26.73■■□□□ 1.87
LIG1-214ENST00000597146 ZMYM4Q5VZL5 1548 aa26.73■■□□□ 1.87
LIG1-214ENST00000597146 DISP3Q9P2K9 1392 aa26.72■■□□□ 1.87
LIG1-214ENST00000597146 ZFYVE16Q7Z3T8 1539 aa26.72■■□□□ 1.87
LIG1-214ENST00000597146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.72■■□□□ 1.87
LIG1-214ENST00000597146 HNRNPUL2Q1KMD3 747 aaKnown RBP26.72■■□□□ 1.87
LIG1-214ENST00000597146 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
LIG1-214ENST00000597146 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
LIG1-214ENST00000597146 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
LIG1-214ENST00000597146 FHOD3Q2V2M9 1422 aa26.71■■□□□ 1.87
LIG1-214ENST00000597146 POGZQ7Z3K3 1410 aa26.7■■□□□ 1.86
LIG1-214ENST00000597146 AKNAQ7Z591 1439 aa26.7■■□□□ 1.86
LIG1-214ENST00000597146 YEATS2Q9ULM3 1422 aa26.7■■□□□ 1.86
LIG1-214ENST00000597146 EFCAB5A4FU69 1503 aa26.68■■□□□ 1.86
LIG1-214ENST00000597146 PREX1Q8TCU6 1659 aa26.67■■□□□ 1.86
LIG1-214ENST00000597146 SOCS7O14512 581 aa26.66■■□□□ 1.86
LIG1-214ENST00000597146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.65■■□□□ 1.86
LIG1-214ENST00000597146 MLECQ14165 292 aa26.63■■□□□ 1.85
LIG1-214ENST00000597146 HECW1Q76N89 1606 aa26.63■■□□□ 1.85
LIG1-214ENST00000597146 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms