RNA–Protein interactions for RNA: ENST00000592606.1

TRMT1-218, Transcript of tRNA methyltransferase 1, humanhuman

TSL 2

Gene TRMT1, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-218ENST00000592606 SYNJ2O15056 1496 aa25.43■■□□□ 1.66
TRMT1-218ENST00000592606 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
TRMT1-218ENST00000592606 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
TRMT1-218ENST00000592606 EFCAB5A4FU69 1503 aa25.39■■□□□ 1.66
TRMT1-218ENST00000592606 IQGAP2Q13576 1575 aa25.35■■□□□ 1.65
TRMT1-218ENST00000592606 SAMD9Q5K651 1589 aa25.32■■□□□ 1.64
TRMT1-218ENST00000592606 CHMP7Q8WUX9 453 aaPredicted RBP25.31■■□□□ 1.64
TRMT1-218ENST00000592606 CEP170Q5SW79 1584 aa25.28■■□□□ 1.64
TRMT1-218ENST00000592606 KIAA0586Q9BVV6 1533 aa25.27■■□□□ 1.64
TRMT1-218ENST00000592606 CHD1O14646 1710 aa25.27■■□□□ 1.64
TRMT1-218ENST00000592606 NUP160Q12769 1436 aa25.23■■□□□ 1.63
TRMT1-218ENST00000592606 FBLN2P98095 1184 aa25.23■■□□□ 1.63
TRMT1-218ENST00000592606 UGGT2Q9NYU1 1516 aa25.22■■□□□ 1.63
TRMT1-218ENST00000592606 FHOD3Q2V2M9 1422 aa25.21■■□□□ 1.63
TRMT1-218ENST00000592606 P3H3Q8IVL6 736 aa25.17■■□□□ 1.62
TRMT1-218ENST00000592606 PPARGC1BQ86YN6 1023 aaKnown RBP25.15■■□□□ 1.62
TRMT1-218ENST00000592606 PCF11O94913 1555 aaKnown RBP25.14■■□□□ 1.61
TRMT1-218ENST00000592606 APLP2Q06481 763 aa25.13■■□□□ 1.61
TRMT1-218ENST00000592606 TRIM26Q12899 539 aaPredicted RBP25.12■■□□□ 1.61
TRMT1-218ENST00000592606 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
TRMT1-218ENST00000592606 KIAA0556O60303 1618 aa25.1■■□□□ 1.61
TRMT1-218ENST00000592606 FYCO1Q9BQS8 1478 aa25.08■■□□□ 1.6
TRMT1-218ENST00000592606 DISP1Q96F81 1524 aa25.07■■□□□ 1.6
TRMT1-218ENST00000592606 CASKIN1Q8WXD9 1431 aa25.06■■□□□ 1.6
TRMT1-218ENST00000592606 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
TRMT1-218ENST00000592606 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
TRMT1-218ENST00000592606 MAP3K1Q13233 1512 aa25.03■■□□□ 1.6
TRMT1-218ENST00000592606 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
TRMT1-218ENST00000592606 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
TRMT1-218ENST00000592606 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
TRMT1-218ENST00000592606 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
TRMT1-218ENST00000592606 CARMIL2Q6F5E8 1435 aa24.96■■□□□ 1.59
TRMT1-218ENST00000592606 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.59
TRMT1-218ENST00000592606 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
TRMT1-218ENST00000592606 HECW1Q76N89 1606 aa24.93■■□□□ 1.58
TRMT1-218ENST00000592606 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
TRMT1-218ENST00000592606 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
TRMT1-218ENST00000592606 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
TRMT1-218ENST00000592606 LRRC9Q6ZRR7 1453 aa24.86■■□□□ 1.57
TRMT1-218ENST00000592606 RAPGEF6Q8TEU7 1601 aa24.86■■□□□ 1.57
TRMT1-218ENST00000592606 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
TRMT1-218ENST00000592606 EPRSP07814 1512 aaKnown RBP24.77■■□□□ 1.56
TRMT1-218ENST00000592606 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
TRMT1-218ENST00000592606 ABCA8O94911 1581 aa24.74■■□□□ 1.55
TRMT1-218ENST00000592606 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
TRMT1-218ENST00000592606 CDK13Q14004 1512 aaKnown RBP24.72■■□□□ 1.55
TRMT1-218ENST00000592606 EHBP1L1Q8N3D4 1523 aa24.72■■□□□ 1.55
TRMT1-218ENST00000592606 PLB1Q6P1J6 1458 aa24.72■■□□□ 1.55
TRMT1-218ENST00000592606 PTPRGP23470 1445 aa24.69■■□□□ 1.54
TRMT1-218ENST00000592606 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
TRMT1-218ENST00000592606 SUPT6HQ7KZ85 1726 aaKnown RBP24.67■■□□□ 1.54
TRMT1-218ENST00000592606 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
TRMT1-218ENST00000592606 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
TRMT1-218ENST00000592606 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
TRMT1-218ENST00000592606 PHLDB1Q86UU1 1377 aa24.59■■□□□ 1.53
TRMT1-218ENST00000592606 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
TRMT1-218ENST00000592606 NCOA2Q15596 1464 aa24.58■■□□□ 1.52
TRMT1-218ENST00000592606 UACAQ9BZF9 1416 aa24.57■■□□□ 1.52
TRMT1-218ENST00000592606 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
TRMT1-218ENST00000592606 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
TRMT1-218ENST00000592606 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
TRMT1-218ENST00000592606 ATP10BO94823 1461 aa24.52■■□□□ 1.52
TRMT1-218ENST00000592606 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
TRMT1-218ENST00000592606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
TRMT1-218ENST00000592606 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
TRMT1-218ENST00000592606 ADCY10Q96PN6 1610 aa24.5■■□□□ 1.51
TRMT1-218ENST00000592606 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
TRMT1-218ENST00000592606 UHRF1BP1LA0JNW5 1464 aa24.47■■□□□ 1.51
TRMT1-218ENST00000592606 MYOM3Q5VTT5 1437 aa24.47■■□□□ 1.51
TRMT1-218ENST00000592606 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
TRMT1-218ENST00000592606 KIF14Q15058 1648 aa24.42■■□□□ 1.5
TRMT1-218ENST00000592606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRMT1-218ENST00000592606 ZCCHC11Q5TAX3 1644 aaKnown RBP24.4■■□□□ 1.5
TRMT1-218ENST00000592606 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
TRMT1-218ENST00000592606 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
TRMT1-218ENST00000592606 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
TRMT1-218ENST00000592606 KDM5BQ9UGL1 1544 aa24.36■■□□□ 1.49
TRMT1-218ENST00000592606 FAM50AQ14320 339 aaKnown RBP24.36■■□□□ 1.49
TRMT1-218ENST00000592606 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
TRMT1-218ENST00000592606 TCOF1Q13428 1488 aaKnown RBP24.33■■□□□ 1.49
TRMT1-218ENST00000592606 ABCC10Q5T3U5 1492 aa24.3■■□□□ 1.48
TRMT1-218ENST00000592606 CDC42BPAQ5VT25 1732 aa24.3■■□□□ 1.48
TRMT1-218ENST00000592606 HRCP23327 699 aa24.27■■□□□ 1.48
TRMT1-218ENST00000592606 ITGAEP38570 1179 aa24.27■■□□□ 1.48
TRMT1-218ENST00000592606 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
TRMT1-218ENST00000592606 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
TRMT1-218ENST00000592606 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
TRMT1-218ENST00000592606 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
TRMT1-218ENST00000592606 PREX2Q70Z35 1606 aa24.2■■□□□ 1.46
TRMT1-218ENST00000592606 TTC37Q6PGP7 1564 aa24.19■■□□□ 1.46
TRMT1-218ENST00000592606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.18■■□□□ 1.46
TRMT1-218ENST00000592606 MYO5CQ9NQX4 1742 aa24.17■■□□□ 1.46
TRMT1-218ENST00000592606 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
TRMT1-218ENST00000592606 CDC42BPBQ9Y5S2 1711 aa24.16■■□□□ 1.46
TRMT1-218ENST00000592606 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
TRMT1-218ENST00000592606 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
TRMT1-218ENST00000592606 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
TRMT1-218ENST00000592606 CCER1Q8TC90 406 aaPredicted RBP24.14■■□□□ 1.45
TRMT1-218ENST00000592606 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
TRMT1-218ENST00000592606 SETD5Q9C0A6 1442 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms