RNA–Protein interactions for RNA: ENST00000592606.1

TRMT1-218, Transcript of tRNA methyltransferase 1, humanhuman

TSL 2

Gene TRMT1, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-218ENST00000592606 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
TRMT1-218ENST00000592606 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
TRMT1-218ENST00000592606 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.55
TRMT1-218ENST00000592606 ABCC9O60706 1549 aa30.57■■■□□ 2.48
TRMT1-218ENST00000592606 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.48
TRMT1-218ENST00000592606 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
TRMT1-218ENST00000592606 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
TRMT1-218ENST00000592606 NACADO15069 1562 aa30.1■■■□□ 2.41
TRMT1-218ENST00000592606 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
TRMT1-218ENST00000592606 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
TRMT1-218ENST00000592606 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
TRMT1-218ENST00000592606 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
TRMT1-218ENST00000592606 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
TRMT1-218ENST00000592606 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
TRMT1-218ENST00000592606 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
TRMT1-218ENST00000592606 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
TRMT1-218ENST00000592606 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
TRMT1-218ENST00000592606 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
TRMT1-218ENST00000592606 MROH2BQ7Z745 1585 aa28.51■■■□□ 2.15
TRMT1-218ENST00000592606 SMARCA4P51532 1647 aa28.45■■■□□ 2.14
TRMT1-218ENST00000592606 WIZO95785 1651 aa28.31■■■□□ 2.12
TRMT1-218ENST00000592606 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
TRMT1-218ENST00000592606 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
TRMT1-218ENST00000592606 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
TRMT1-218ENST00000592606 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
TRMT1-218ENST00000592606 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
TRMT1-218ENST00000592606 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
TRMT1-218ENST00000592606 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
TRMT1-218ENST00000592606 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
TRMT1-218ENST00000592606 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
TRMT1-218ENST00000592606 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
TRMT1-218ENST00000592606 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
TRMT1-218ENST00000592606 PRDM2Q13029 1718 aa27.11■■□□□ 1.93
TRMT1-218ENST00000592606 CFTRP13569 1480 aa27.08■■□□□ 1.93
TRMT1-218ENST00000592606 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
TRMT1-218ENST00000592606 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
TRMT1-218ENST00000592606 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
TRMT1-218ENST00000592606 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
TRMT1-218ENST00000592606 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
TRMT1-218ENST00000592606 LAMC3Q9Y6N6 1575 aa26.87■■□□□ 1.89
TRMT1-218ENST00000592606 SYNJ1O43426 1573 aa26.84■■□□□ 1.89
TRMT1-218ENST00000592606 NESP48681 1621 aa26.8■■□□□ 1.88
TRMT1-218ENST00000592606 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
TRMT1-218ENST00000592606 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
TRMT1-218ENST00000592606 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
TRMT1-218ENST00000592606 CUX1P39880 1505 aa26.68■■□□□ 1.86
TRMT1-218ENST00000592606 PDS5BQ9NTI5 1447 aa26.6■■□□□ 1.85
TRMT1-218ENST00000592606 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
TRMT1-218ENST00000592606 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
TRMT1-218ENST00000592606 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
TRMT1-218ENST00000592606 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
TRMT1-218ENST00000592606 SOGA1O94964 1423 aa26.49■■□□□ 1.83
TRMT1-218ENST00000592606 EEA1Q15075 1411 aa26.48■■□□□ 1.83
TRMT1-218ENST00000592606 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
TRMT1-218ENST00000592606 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
TRMT1-218ENST00000592606 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
TRMT1-218ENST00000592606 FGD5Q6ZNL6 1462 aa26.4■■□□□ 1.82
TRMT1-218ENST00000592606 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
TRMT1-218ENST00000592606 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
TRMT1-218ENST00000592606 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
TRMT1-218ENST00000592606 CSRNP3Q8WYN3 585 aa26.27■■□□□ 1.8
TRMT1-218ENST00000592606 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
TRMT1-218ENST00000592606 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
TRMT1-218ENST00000592606 KIF21BO75037 1637 aa26.2■■□□□ 1.78
TRMT1-218ENST00000592606 CUX2O14529 1486 aa26.19■■□□□ 1.78
TRMT1-218ENST00000592606 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
TRMT1-218ENST00000592606 WDR62O43379 1518 aa26.18■■□□□ 1.78
TRMT1-218ENST00000592606 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
TRMT1-218ENST00000592606 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
TRMT1-218ENST00000592606 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
TRMT1-218ENST00000592606 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
TRMT1-218ENST00000592606 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
TRMT1-218ENST00000592606 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
TRMT1-218ENST00000592606 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
TRMT1-218ENST00000592606 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
TRMT1-218ENST00000592606 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
TRMT1-218ENST00000592606 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
TRMT1-218ENST00000592606 IGF1RP08069 1367 aa25.97■■□□□ 1.75
TRMT1-218ENST00000592606 TNIKQ9UKE5 1360 aa25.97■■□□□ 1.75
TRMT1-218ENST00000592606 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
TRMT1-218ENST00000592606 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
TRMT1-218ENST00000592606 CUL7Q14999 1698 aa25.92■■□□□ 1.74
TRMT1-218ENST00000592606 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
TRMT1-218ENST00000592606 TDRD9Q8NDG6 1382 aaKnown RBP25.9■■□□□ 1.74
TRMT1-218ENST00000592606 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
TRMT1-218ENST00000592606 CARMIL1Q5VZK9 1371 aa25.85■■□□□ 1.73
TRMT1-218ENST00000592606 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
TRMT1-218ENST00000592606 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
TRMT1-218ENST00000592606 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.721e-6■■■■■ 33.8
TRMT1-218ENST00000592606 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
TRMT1-218ENST00000592606 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
TRMT1-218ENST00000592606 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
TRMT1-218ENST00000592606 CLIP1P30622 1438 aa25.66■■□□□ 1.7
TRMT1-218ENST00000592606 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
TRMT1-218ENST00000592606 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
TRMT1-218ENST00000592606 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
TRMT1-218ENST00000592606 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
TRMT1-218ENST00000592606 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
TRMT1-218ENST00000592606 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
TRMT1-218ENST00000592606 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms