RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 CARMIL1Q5VZK9 1371 aa31.45■■■□□ 2.63
TCF3-216ENST00000592395 SHROOM2Q13796 1616 aa31.32■■■□□ 2.6
TCF3-216ENST00000592395 RAPGEF2Q9Y4G8 1499 aa31.29■■■□□ 2.6
TCF3-216ENST00000592395 ARAP1Q96P48 1450 aa31.27■■■□□ 2.6
TCF3-216ENST00000592395 KIAA0586Q9BVV6 1533 aa31.25■■■□□ 2.59
TCF3-216ENST00000592395 EEA1Q15075 1411 aa31.24■■■□□ 2.59
TCF3-216ENST00000592395 PRXQ9BXM0 1461 aa31.19■■■□□ 2.58
TCF3-216ENST00000592395 CYB5RLQ6IPT4 315 aa31.18■■■□□ 2.58
TCF3-216ENST00000592395 JPH4Q96JJ6 628 aa31.18■■■□□ 2.58
TCF3-216ENST00000592395 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
TCF3-216ENST00000592395 FOXD1Q16676 465 aa31.15■■■□□ 2.58
TCF3-216ENST00000592395 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.58
TCF3-216ENST00000592395 PRG4Q92954 1404 aaPredicted RBP31.14■■■□□ 2.58
TCF3-216ENST00000592395 IQGAP2Q13576 1575 aa31.11■■■□□ 2.57
TCF3-216ENST00000592395 CTTNBP2Q8WZ74 1663 aa31.05■■■□□ 2.56
TCF3-216ENST00000592395 FAM9AQ8IZU1 332 aaPredicted RBP31.02■■■□□ 2.56
TCF3-216ENST00000592395 UGGT2Q9NYU1 1516 aa30.93■■■□□ 2.54
TCF3-216ENST00000592395 KIF21BO75037 1637 aa30.93■■■□□ 2.54
TCF3-216ENST00000592395 CARMIL2Q6F5E8 1435 aa30.92■■■□□ 2.54
TCF3-216ENST00000592395 DISP1Q96F81 1524 aa30.86■■■□□ 2.53
TCF3-216ENST00000592395 KIAA0556O60303 1618 aa30.81■■■□□ 2.52
TCF3-216ENST00000592395 TNIKQ9UKE5 1360 aa30.8■■■□□ 2.52
TCF3-216ENST00000592395 PTPRGP23470 1445 aa30.77■■■□□ 2.52
TCF3-216ENST00000592395 GOLGA3Q08378 1498 aa30.76■■■□□ 2.52
TCF3-216ENST00000592395 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
TCF3-216ENST00000592395 TTBK1Q5TCY1 1321 aaPredicted RBP30.66■■■□□ 2.5
TCF3-216ENST00000592395 SAMD9Q5K651 1589 aa30.62■■■□□ 2.49
TCF3-216ENST00000592395 UBTFP17480 764 aaKnown RBP30.59■■■□□ 2.49
TCF3-216ENST00000592395 EHMT2Q96KQ7 1210 aa30.59■■■□□ 2.49
TCF3-216ENST00000592395 UACAQ9BZF9 1416 aa30.57■■■□□ 2.48
TCF3-216ENST00000592395 UHRF1BP1LA0JNW5 1464 aa30.57■■■□□ 2.48
TCF3-216ENST00000592395 NPM1P06748 294 aaKnown RBP eCLIP30.55■■■□□ 2.48
TCF3-216ENST00000592395 ABCC2Q92887 1545 aa30.55■■■□□ 2.48
TCF3-216ENST00000592395 TRHP20396 242 aaPredicted RBP30.53■■■□□ 2.48
TCF3-216ENST00000592395 EFCAB5A4FU69 1503 aa30.51■■■□□ 2.47
TCF3-216ENST00000592395 MAPKBP1O60336 1514 aa30.5■■■□□ 2.47
TCF3-216ENST00000592395 RANGAP1P46060 587 aaPredicted RBP30.49■■■□□ 2.47
TCF3-216ENST00000592395 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
TCF3-216ENST00000592395 ABCA8O94911 1581 aa30.46■■■□□ 2.47
TCF3-216ENST00000592395 PLB1Q6P1J6 1458 aa30.46■■■□□ 2.47
TCF3-216ENST00000592395 KDM5BQ9UGL1 1544 aa30.42■■■□□ 2.46
TCF3-216ENST00000592395 PPP6R1Q9UPN7 881 aa30.41■■■□□ 2.46
TCF3-216ENST00000592395 FHOD3Q2V2M9 1422 aa30.4■■■□□ 2.46
TCF3-216ENST00000592395 ADRA2BP18089 450 aa30.4■■■□□ 2.46
TCF3-216ENST00000592395 ZCCHC11Q5TAX3 1644 aaKnown RBP30.37■■■□□ 2.45
TCF3-216ENST00000592395 KIF13AQ9H1H9 1805 aa30.35■■■□□ 2.45
TCF3-216ENST00000592395 RAPGEF6Q8TEU7 1601 aa30.33■■■□□ 2.45
TCF3-216ENST00000592395 ABCC10Q5T3U5 1492 aa30.32■■■□□ 2.44
TCF3-216ENST00000592395 ARHGAP35Q9NRY4 1499 aa30.32■■■□□ 2.44
TCF3-216ENST00000592395 DIP2BQ9P265 1576 aa30.3■■■□□ 2.44
TCF3-216ENST00000592395 ASXL2Q76L83 1435 aa30.3■■■□□ 2.44
TCF3-216ENST00000592395 FAM69CQ0P6D2 419 aa30.22■■■□□ 2.43
TCF3-216ENST00000592395 FMN1Q68DA7 1419 aa30.2■■■□□ 2.42
TCF3-216ENST00000592395 ATP10BO94823 1461 aa30.19■■■□□ 2.42
TCF3-216ENST00000592395 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
TCF3-216ENST00000592395 WDR7Q9Y4E6 1490 aa30.17■■■□□ 2.42
TCF3-216ENST00000592395 CLIP1P30622 1438 aa30.15■■■□□ 2.42
TCF3-216ENST00000592395 GLI2P10070 1586 aa30.15■■■□□ 2.42
TCF3-216ENST00000592395 EPRSP07814 1512 aaKnown RBP30.13■■■□□ 2.41
TCF3-216ENST00000592395 ARID3CA6NKF2 412 aa30.13■■■□□ 2.41
TCF3-216ENST00000592395 HECW1Q76N89 1606 aa30.08■■■□□ 2.41
TCF3-216ENST00000592395 LOC105371045A0A1W2PR82 267 aa30.05■■■□□ 2.4
TCF3-216ENST00000592395 TSPOAP1O95153 1857 aa30.04■■■□□ 2.4
TCF3-216ENST00000592395 CEP162Q5TB80 1403 aa30.04■■■□□ 2.4
TCF3-216ENST00000592395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.03■■■□□ 2.4
TCF3-216ENST00000592395 HNRNPUL2Q1KMD3 747 aaKnown RBP30.03■■■□□ 2.4
TCF3-216ENST00000592395 MAP3K4Q9Y6R4 1608 aa30.02■■■□□ 2.4
TCF3-216ENST00000592395 PCF11O94913 1555 aaKnown RBP29.98■■■□□ 2.39
TCF3-216ENST00000592395 CDK13Q14004 1512 aaKnown RBP29.97■■■□□ 2.39
TCF3-216ENST00000592395 KCNH8Q96L42 1107 aa29.97■■■□□ 2.39
TCF3-216ENST00000592395 CFAP43Q8NDM7 1665 aa29.96■■■□□ 2.39
TCF3-216ENST00000592395 ATP1B4Q9UN42 357 aaPredicted RBP29.96■■■□□ 2.39
TCF3-216ENST00000592395 CASKIN1Q8WXD9 1431 aa29.96■■■□□ 2.39
TCF3-216ENST00000592395 PPRC1Q5VV67 1664 aaKnown RBP29.95■■■□□ 2.39
TCF3-216ENST00000592395 PLEKHD1A6NEE1 506 aa29.92■■■□□ 2.38
TCF3-216ENST00000592395 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
TCF3-216ENST00000592395 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
TCF3-216ENST00000592395 ABCA9Q8IUA7 1624 aa29.89■■■□□ 2.37
TCF3-216ENST00000592395 CD109Q6YHK3 1445 aa29.87■■■□□ 2.37
TCF3-216ENST00000592395 CCDC18Q5T9S5 1454 aa29.87■■■□□ 2.37
TCF3-216ENST00000592395 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
TCF3-216ENST00000592395 MAGI3Q5TCQ9 1506 aa29.83■■■□□ 2.37
TCF3-216ENST00000592395 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
TCF3-216ENST00000592395 KDM6BO15054 1643 aa29.81■■■□□ 2.36
TCF3-216ENST00000592395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.76■■■□□ 2.35
TCF3-216ENST00000592395 TROQ12816 1431 aaPredicted RBP29.74■■■□□ 2.35
TCF3-216ENST00000592395 TTC37Q6PGP7 1564 aa29.72■■■□□ 2.35
TCF3-216ENST00000592395 KIF14Q15058 1648 aa29.71■■■□□ 2.35
TCF3-216ENST00000592395 VPS8Q8N3P4 1428 aa29.68■■■□□ 2.34
TCF3-216ENST00000592395 NEO1Q92859 1461 aa29.62■■■□□ 2.33
TCF3-216ENST00000592395 COL17A1Q9UMD9 1497 aaPredicted RBP29.62■■■□□ 2.33
TCF3-216ENST00000592395 PHLDB1Q86UU1 1377 aa29.62■■■□□ 2.33
TCF3-216ENST00000592395 MYO5CQ9NQX4 1742 aa29.61■■■□□ 2.33
TCF3-216ENST00000592395 CFAP74Q9C0B2 1584 aa29.6■■■□□ 2.33
TCF3-216ENST00000592395 ARAP3Q8WWN8 1544 aa29.57■■■□□ 2.32
TCF3-216ENST00000592395 PLCH2O75038 1416 aa29.56■■■□□ 2.32
TCF3-216ENST00000592395 FANCAO15360 1455 aa29.55■■■□□ 2.32
TCF3-216ENST00000592395 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
TCF3-216ENST00000592395 EHBP1L1Q8N3D4 1523 aa29.51■■■□□ 2.32
TCF3-216ENST00000592395 TIAM1Q13009 1591 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms