RNA–Protein interactions for RNA: ENST00000590934.1

TMC6-217, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-217ENST00000590934 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
TMC6-217ENST00000590934 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
TMC6-217ENST00000590934 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
TMC6-217ENST00000590934 VPS8Q8N3P4 1428 aa18.3■□□□□ 0.52
TMC6-217ENST00000590934 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
TMC6-217ENST00000590934 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
TMC6-217ENST00000590934 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
TMC6-217ENST00000590934 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
TMC6-217ENST00000590934 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
TMC6-217ENST00000590934 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
TMC6-217ENST00000590934 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
TMC6-217ENST00000590934 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
TMC6-217ENST00000590934 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
TMC6-217ENST00000590934 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
TMC6-217ENST00000590934 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
TMC6-217ENST00000590934 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
TMC6-217ENST00000590934 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
TMC6-217ENST00000590934 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
TMC6-217ENST00000590934 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
TMC6-217ENST00000590934 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
TMC6-217ENST00000590934 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
TMC6-217ENST00000590934 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
TMC6-217ENST00000590934 KIAA0586Q9BVV6 1533 aa18.03■□□□□ 0.48
TMC6-217ENST00000590934 APLP2Q06481 763 aa18.02■□□□□ 0.48
TMC6-217ENST00000590934 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
TMC6-217ENST00000590934 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
TMC6-217ENST00000590934 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
TMC6-217ENST00000590934 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
TMC6-217ENST00000590934 NUP160Q12769 1436 aa17.98■□□□□ 0.47
TMC6-217ENST00000590934 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
TMC6-217ENST00000590934 FYCO1Q9BQS8 1478 aa17.97■□□□□ 0.47
TMC6-217ENST00000590934 CASKIN1Q8WXD9 1431 aa17.97■□□□□ 0.47
TMC6-217ENST00000590934 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
TMC6-217ENST00000590934 PCF11O94913 1555 aaKnown RBP17.93■□□□□ 0.46
TMC6-217ENST00000590934 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
TMC6-217ENST00000590934 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
TMC6-217ENST00000590934 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
TMC6-217ENST00000590934 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
TMC6-217ENST00000590934 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
TMC6-217ENST00000590934 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
TMC6-217ENST00000590934 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
TMC6-217ENST00000590934 LRRC9Q6ZRR7 1453 aa17.84■□□□□ 0.45
TMC6-217ENST00000590934 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.44
TMC6-217ENST00000590934 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
TMC6-217ENST00000590934 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
TMC6-217ENST00000590934 JPH4Q96JJ6 628 aa17.79■□□□□ 0.44
TMC6-217ENST00000590934 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
TMC6-217ENST00000590934 RRBP1Q9P2E9 1410 aaKnown RBP17.78■□□□□ 0.44
TMC6-217ENST00000590934 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
TMC6-217ENST00000590934 HRCP23327 699 aa17.77■□□□□ 0.44
TMC6-217ENST00000590934 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
TMC6-217ENST00000590934 ATP1B4Q9UN42 357 aaPredicted RBP17.7■□□□□ 0.42
TMC6-217ENST00000590934 EPRSP07814 1512 aaKnown RBP17.7■□□□□ 0.42
TMC6-217ENST00000590934 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
TMC6-217ENST00000590934 EHBP1L1Q8N3D4 1523 aa17.68■□□□□ 0.42
TMC6-217ENST00000590934 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
TMC6-217ENST00000590934 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
TMC6-217ENST00000590934 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
TMC6-217ENST00000590934 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
TMC6-217ENST00000590934 RAPGEF6Q8TEU7 1601 aa17.66■□□□□ 0.42
TMC6-217ENST00000590934 NUP153P49790 1475 aaKnown RBP17.66■□□□□ 0.42
TMC6-217ENST00000590934 ADCY10Q96PN6 1610 aa17.65■□□□□ 0.42
TMC6-217ENST00000590934 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
TMC6-217ENST00000590934 ABCC10Q5T3U5 1492 aa17.63■□□□□ 0.41
TMC6-217ENST00000590934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.416e-7■■■■□ 21.2
TMC6-217ENST00000590934 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
TMC6-217ENST00000590934 ABCA8O94911 1581 aa17.62■□□□□ 0.41
TMC6-217ENST00000590934 DIP2BQ9P265 1576 aa17.61■□□□□ 0.41
TMC6-217ENST00000590934 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
TMC6-217ENST00000590934 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
TMC6-217ENST00000590934 CDK13Q14004 1512 aaKnown RBP17.6■□□□□ 0.41
TMC6-217ENST00000590934 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
TMC6-217ENST00000590934 TSPOAP1O95153 1857 aa17.58■□□□□ 0.4
TMC6-217ENST00000590934 PTPRGP23470 1445 aa17.57■□□□□ 0.4
TMC6-217ENST00000590934 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
TMC6-217ENST00000590934 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
TMC6-217ENST00000590934 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
TMC6-217ENST00000590934 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
TMC6-217ENST00000590934 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
TMC6-217ENST00000590934 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
TMC6-217ENST00000590934 KDM6BO15054 1643 aa17.52■□□□□ 0.4
TMC6-217ENST00000590934 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
TMC6-217ENST00000590934 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
TMC6-217ENST00000590934 MIA2Q96PC5 1412 aa17.48■□□□□ 0.39
TMC6-217ENST00000590934 ATP10BO94823 1461 aa17.48■□□□□ 0.39
TMC6-217ENST00000590934 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
TMC6-217ENST00000590934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
TMC6-217ENST00000590934 KDM4FA0A1W2PPD8 638 aa17.46■□□□□ 0.39
TMC6-217ENST00000590934 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
TMC6-217ENST00000590934 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
TMC6-217ENST00000590934 ABCC2Q92887 1545 aa17.44■□□□□ 0.38
TMC6-217ENST00000590934 ARID3CA6NKF2 412 aa17.44■□□□□ 0.38
TMC6-217ENST00000590934 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
TMC6-217ENST00000590934 PTPN23Q9H3S7 1636 aa17.41■□□□□ 0.38
TMC6-217ENST00000590934 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
TMC6-217ENST00000590934 PPRC1Q5VV67 1664 aaKnown RBP17.39■□□□□ 0.37
TMC6-217ENST00000590934 PLEKHD1A6NEE1 506 aa17.38■□□□□ 0.37
TMC6-217ENST00000590934 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
TMC6-217ENST00000590934 KIF14Q15058 1648 aa17.36■□□□□ 0.37
TMC6-217ENST00000590934 ITGAEP38570 1179 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms