RNA–Protein interactions for RNA: ENST00000590934.1

TMC6-217, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-217ENST00000590934 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
TMC6-217ENST00000590934 ABCC9O60706 1549 aa22.97■■□□□ 1.27
TMC6-217ENST00000590934 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
TMC6-217ENST00000590934 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
TMC6-217ENST00000590934 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
TMC6-217ENST00000590934 DNAJC5BQ9UF47 199 aa21.75■■□□□ 1.07
TMC6-217ENST00000590934 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
TMC6-217ENST00000590934 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
TMC6-217ENST00000590934 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
TMC6-217ENST00000590934 NACADO15069 1562 aa21.49■■□□□ 1.03
TMC6-217ENST00000590934 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.012e-6■□□□□ 9.6
TMC6-217ENST00000590934 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
TMC6-217ENST00000590934 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
TMC6-217ENST00000590934 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
TMC6-217ENST00000590934 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
TMC6-217ENST00000590934 CC2D2AQ9P2K1 1620 aa20.72■□□□□ 0.91
TMC6-217ENST00000590934 CECR2Q9BXF3 1484 aa20.67■□□□□ 0.9
TMC6-217ENST00000590934 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
TMC6-217ENST00000590934 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
TMC6-217ENST00000590934 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
TMC6-217ENST00000590934 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
TMC6-217ENST00000590934 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
TMC6-217ENST00000590934 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
TMC6-217ENST00000590934 WIZO95785 1651 aa20.1■□□□□ 0.81
TMC6-217ENST00000590934 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
TMC6-217ENST00000590934 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
TMC6-217ENST00000590934 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
TMC6-217ENST00000590934 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
TMC6-217ENST00000590934 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
TMC6-217ENST00000590934 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
TMC6-217ENST00000590934 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
TMC6-217ENST00000590934 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
TMC6-217ENST00000590934 CUX2O14529 1486 aa19.77■□□□□ 0.76
TMC6-217ENST00000590934 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
TMC6-217ENST00000590934 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
TMC6-217ENST00000590934 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
TMC6-217ENST00000590934 NESP48681 1621 aa19.69■□□□□ 0.74
TMC6-217ENST00000590934 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
TMC6-217ENST00000590934 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
TMC6-217ENST00000590934 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
TMC6-217ENST00000590934 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
TMC6-217ENST00000590934 CFTRP13569 1480 aa19.32■□□□□ 0.68
TMC6-217ENST00000590934 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
TMC6-217ENST00000590934 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
TMC6-217ENST00000590934 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
TMC6-217ENST00000590934 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
TMC6-217ENST00000590934 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
TMC6-217ENST00000590934 WDR62O43379 1518 aa19.15■□□□□ 0.66
TMC6-217ENST00000590934 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
TMC6-217ENST00000590934 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
TMC6-217ENST00000590934 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
TMC6-217ENST00000590934 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
TMC6-217ENST00000590934 EEA1Q15075 1411 aa19.07■□□□□ 0.64
TMC6-217ENST00000590934 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
TMC6-217ENST00000590934 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
TMC6-217ENST00000590934 CUX1P39880 1505 aa19.01■□□□□ 0.63
TMC6-217ENST00000590934 SOGA1O94964 1423 aa18.99■□□□□ 0.63
TMC6-217ENST00000590934 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
TMC6-217ENST00000590934 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
TMC6-217ENST00000590934 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
TMC6-217ENST00000590934 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
TMC6-217ENST00000590934 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
TMC6-217ENST00000590934 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
TMC6-217ENST00000590934 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
TMC6-217ENST00000590934 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
TMC6-217ENST00000590934 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
TMC6-217ENST00000590934 KIF27Q86VH2 1401 aa18.76■□□□□ 0.59
TMC6-217ENST00000590934 KIF21BO75037 1637 aa18.76■□□□□ 0.59
TMC6-217ENST00000590934 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
TMC6-217ENST00000590934 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
TMC6-217ENST00000590934 TNIKQ9UKE5 1360 aa18.71■□□□□ 0.59
TMC6-217ENST00000590934 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
TMC6-217ENST00000590934 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.58
TMC6-217ENST00000590934 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.58
TMC6-217ENST00000590934 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.58
TMC6-217ENST00000590934 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
TMC6-217ENST00000590934 PRXQ9BXM0 1461 aa18.69■□□□□ 0.58
TMC6-217ENST00000590934 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
TMC6-217ENST00000590934 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
TMC6-217ENST00000590934 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
TMC6-217ENST00000590934 EHMT2Q96KQ7 1210 aa18.61■□□□□ 0.57
TMC6-217ENST00000590934 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
TMC6-217ENST00000590934 IGF1RP08069 1367 aa18.6■□□□□ 0.57
TMC6-217ENST00000590934 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
TMC6-217ENST00000590934 ARHGEF11O15085 1522 aa18.59■□□□□ 0.57
TMC6-217ENST00000590934 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
TMC6-217ENST00000590934 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.569e-13■■■■□ 23
TMC6-217ENST00000590934 CHD1O14646 1710 aa18.55■□□□□ 0.56
TMC6-217ENST00000590934 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
TMC6-217ENST00000590934 WDR97A6NE52 1622 aa18.55■□□□□ 0.56
TMC6-217ENST00000590934 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
TMC6-217ENST00000590934 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
TMC6-217ENST00000590934 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
TMC6-217ENST00000590934 FBLN2P98095 1184 aa18.49■□□□□ 0.55
TMC6-217ENST00000590934 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
TMC6-217ENST00000590934 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
TMC6-217ENST00000590934 CUL7Q14999 1698 aa18.43■□□□□ 0.54
TMC6-217ENST00000590934 CLIP1P30622 1438 aa18.42■□□□□ 0.54
TMC6-217ENST00000590934 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
TMC6-217ENST00000590934 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms