RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 VPS8Q8N3P4 1428 aa15.65■□□□□ 0.1
RANBP3-216ENST00000589353 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
RANBP3-216ENST00000589353 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.09
RANBP3-216ENST00000589353 APLP2Q06481 763 aa15.63■□□□□ 0.09
RANBP3-216ENST00000589353 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
RANBP3-216ENST00000589353 FBLN2P98095 1184 aa15.61■□□□□ 0.09
RANBP3-216ENST00000589353 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
RANBP3-216ENST00000589353 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
RANBP3-216ENST00000589353 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
RANBP3-216ENST00000589353 NUP160Q12769 1436 aa15.53■□□□□ 0.08
RANBP3-216ENST00000589353 FMN1Q68DA7 1419 aa15.52■□□□□ 0.08
RANBP3-216ENST00000589353 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
RANBP3-216ENST00000589353 SAMD9Q5K651 1589 aa15.52■□□□□ 0.07
RANBP3-216ENST00000589353 UGGT2Q9NYU1 1516 aa15.52■□□□□ 0.07
RANBP3-216ENST00000589353 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
RANBP3-216ENST00000589353 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
RANBP3-216ENST00000589353 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
RANBP3-216ENST00000589353 CHD1O14646 1710 aa15.47■□□□□ 0.07
RANBP3-216ENST00000589353 CARMIL2Q6F5E8 1435 aa15.47■□□□□ 0.07
RANBP3-216ENST00000589353 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
RANBP3-216ENST00000589353 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
RANBP3-216ENST00000589353 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
RANBP3-216ENST00000589353 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
RANBP3-216ENST00000589353 PPARGC1BQ86YN6 1023 aaKnown RBP15.41■□□□□ 0.06
RANBP3-216ENST00000589353 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
RANBP3-216ENST00000589353 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
RANBP3-216ENST00000589353 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
RANBP3-216ENST00000589353 DISP1Q96F81 1524 aa15.39■□□□□ 0.05
RANBP3-216ENST00000589353 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
RANBP3-216ENST00000589353 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
RANBP3-216ENST00000589353 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
RANBP3-216ENST00000589353 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.05
RANBP3-216ENST00000589353 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
RANBP3-216ENST00000589353 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
RANBP3-216ENST00000589353 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
RANBP3-216ENST00000589353 CFAP43Q8NDM7 1665 aa15.32■□□□□ 0.04
RANBP3-216ENST00000589353 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
RANBP3-216ENST00000589353 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
RANBP3-216ENST00000589353 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
RANBP3-216ENST00000589353 LRRC9Q6ZRR7 1453 aa15.28■□□□□ 0.04
RANBP3-216ENST00000589353 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
RANBP3-216ENST00000589353 PTPRGP23470 1445 aa15.26■□□□□ 0.03
RANBP3-216ENST00000589353 CDK11AQ9UQ88 783 aaPredicted RBP15.26■□□□□ 0.03
RANBP3-216ENST00000589353 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
RANBP3-216ENST00000589353 EPRSP07814 1512 aaKnown RBP15.24■□□□□ 0.03
RANBP3-216ENST00000589353 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
RANBP3-216ENST00000589353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
RANBP3-216ENST00000589353 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
RANBP3-216ENST00000589353 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
RANBP3-216ENST00000589353 ABCA8O94911 1581 aa15.19■□□□□ 0.02
RANBP3-216ENST00000589353 LRRIQ1Q96JM4 1722 aa15.19■□□□□ 0.02
RANBP3-216ENST00000589353 PLB1Q6P1J6 1458 aa15.19■□□□□ 0.02
RANBP3-216ENST00000589353 UACAQ9BZF9 1416 aa15.17■□□□□ 0.02
RANBP3-216ENST00000589353 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
RANBP3-216ENST00000589353 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
RANBP3-216ENST00000589353 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
RANBP3-216ENST00000589353 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
RANBP3-216ENST00000589353 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
RANBP3-216ENST00000589353 ERCC6L2Q5T890 1561 aa15.12■□□□□ 0.01
RANBP3-216ENST00000589353 ARID3CA6NKF2 412 aa15.12■□□□□ 0.01
RANBP3-216ENST00000589353 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
RANBP3-216ENST00000589353 ABCC2Q92887 1545 aa15.11■□□□□ 0.01
RANBP3-216ENST00000589353 TROQ12816 1431 aaPredicted RBP15.1■□□□□ 0.01
RANBP3-216ENST00000589353 UHRF1BP1LA0JNW5 1464 aa15.1■□□□□ 0.01
RANBP3-216ENST00000589353 PHLDB1Q86UU1 1377 aa15.1■□□□□ 0.01
RANBP3-216ENST00000589353 ATP10BO94823 1461 aa15.09■□□□□ 0.01
RANBP3-216ENST00000589353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
RANBP3-216ENST00000589353 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0
RANBP3-216ENST00000589353 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
RANBP3-216ENST00000589353 ARHGEF11O15085 1522 aa15.06■□□□□ 0
RANBP3-216ENST00000589353 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
RANBP3-216ENST00000589353 MIA2Q96PC5 1412 aa15.04■□□□□ -0
RANBP3-216ENST00000589353 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
RANBP3-216ENST00000589353 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
RANBP3-216ENST00000589353 KIF14Q15058 1648 aa15.01□□□□□ -0.01
RANBP3-216ENST00000589353 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
RANBP3-216ENST00000589353 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
RANBP3-216ENST00000589353 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
RANBP3-216ENST00000589353 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
RANBP3-216ENST00000589353 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
RANBP3-216ENST00000589353 TCOF1Q13428 1488 aaKnown RBP14.96□□□□□ -0.01
RANBP3-216ENST00000589353 ITGAEP38570 1179 aa14.96□□□□□ -0.01
RANBP3-216ENST00000589353 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
RANBP3-216ENST00000589353 CFDP1Q9UEE9 299 aaPredicted RBP14.95□□□□□ -0.02
RANBP3-216ENST00000589353 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
RANBP3-216ENST00000589353 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
RANBP3-216ENST00000589353 HRCP23327 699 aa14.91□□□□□ -0.02
RANBP3-216ENST00000589353 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
RANBP3-216ENST00000589353 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
RANBP3-216ENST00000589353 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
RANBP3-216ENST00000589353 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
RANBP3-216ENST00000589353 CDC42BPAQ5VT25 1732 aa14.87□□□□□ -0.03
RANBP3-216ENST00000589353 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
RANBP3-216ENST00000589353 RIMBP3CA6NJZ7 1639 aa14.87□□□□□ -0.03
RANBP3-216ENST00000589353 RIMBP3BA6NNM3 1639 aa14.87□□□□□ -0.03
RANBP3-216ENST00000589353 RIMBP3Q9UFD9 1639 aa14.87□□□□□ -0.03
RANBP3-216ENST00000589353 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
RANBP3-216ENST00000589353 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
RANBP3-216ENST00000589353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.86□□□□□ -0.037e-8■□□□□ 9
RANBP3-216ENST00000589353 CAMSAP2Q08AD1 1489 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms