RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
RANBP3-216ENST00000589353 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
RANBP3-216ENST00000589353 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
RANBP3-216ENST00000589353 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
RANBP3-216ENST00000589353 ABCC9O60706 1549 aa18.79■□□□□ 0.6
RANBP3-216ENST00000589353 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
RANBP3-216ENST00000589353 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
RANBP3-216ENST00000589353 NACADO15069 1562 aa18.56■□□□□ 0.56
RANBP3-216ENST00000589353 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
RANBP3-216ENST00000589353 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
RANBP3-216ENST00000589353 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
RANBP3-216ENST00000589353 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
RANBP3-216ENST00000589353 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
RANBP3-216ENST00000589353 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
RANBP3-216ENST00000589353 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
RANBP3-216ENST00000589353 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
RANBP3-216ENST00000589353 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
RANBP3-216ENST00000589353 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
RANBP3-216ENST00000589353 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
RANBP3-216ENST00000589353 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
RANBP3-216ENST00000589353 WIZO95785 1651 aa17.32■□□□□ 0.36
RANBP3-216ENST00000589353 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
RANBP3-216ENST00000589353 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
RANBP3-216ENST00000589353 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
RANBP3-216ENST00000589353 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
RANBP3-216ENST00000589353 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
RANBP3-216ENST00000589353 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
RANBP3-216ENST00000589353 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
RANBP3-216ENST00000589353 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RANBP3-216ENST00000589353 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
RANBP3-216ENST00000589353 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
RANBP3-216ENST00000589353 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
RANBP3-216ENST00000589353 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
RANBP3-216ENST00000589353 CFTRP13569 1480 aa16.67■□□□□ 0.26
RANBP3-216ENST00000589353 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
RANBP3-216ENST00000589353 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
RANBP3-216ENST00000589353 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.245e-6■■■■■ 29.2
RANBP3-216ENST00000589353 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
RANBP3-216ENST00000589353 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
RANBP3-216ENST00000589353 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
RANBP3-216ENST00000589353 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
RANBP3-216ENST00000589353 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
RANBP3-216ENST00000589353 NESP48681 1621 aa16.43■□□□□ 0.22
RANBP3-216ENST00000589353 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
RANBP3-216ENST00000589353 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
RANBP3-216ENST00000589353 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
RANBP3-216ENST00000589353 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
RANBP3-216ENST00000589353 EEA1Q15075 1411 aa16.38■□□□□ 0.21
RANBP3-216ENST00000589353 CUX1P39880 1505 aa16.36■□□□□ 0.21
RANBP3-216ENST00000589353 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
RANBP3-216ENST00000589353 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
RANBP3-216ENST00000589353 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
RANBP3-216ENST00000589353 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
RANBP3-216ENST00000589353 SOGA1O94964 1423 aa16.25■□□□□ 0.19
RANBP3-216ENST00000589353 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
RANBP3-216ENST00000589353 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
RANBP3-216ENST00000589353 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
RANBP3-216ENST00000589353 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
RANBP3-216ENST00000589353 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
RANBP3-216ENST00000589353 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
RANBP3-216ENST00000589353 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
RANBP3-216ENST00000589353 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
RANBP3-216ENST00000589353 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
RANBP3-216ENST00000589353 CUX2O14529 1486 aa16.12■□□□□ 0.17
RANBP3-216ENST00000589353 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
RANBP3-216ENST00000589353 WDR62O43379 1518 aa16.09■□□□□ 0.17
RANBP3-216ENST00000589353 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
RANBP3-216ENST00000589353 KIF21BO75037 1637 aa16.08■□□□□ 0.16
RANBP3-216ENST00000589353 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
RANBP3-216ENST00000589353 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
RANBP3-216ENST00000589353 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
RANBP3-216ENST00000589353 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
RANBP3-216ENST00000589353 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
RANBP3-216ENST00000589353 TNIKQ9UKE5 1360 aa16.02■□□□□ 0.16
RANBP3-216ENST00000589353 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
RANBP3-216ENST00000589353 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
RANBP3-216ENST00000589353 IGF1RP08069 1367 aa16■□□□□ 0.15
RANBP3-216ENST00000589353 PRXQ9BXM0 1461 aa16■□□□□ 0.15
RANBP3-216ENST00000589353 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
RANBP3-216ENST00000589353 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
RANBP3-216ENST00000589353 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
RANBP3-216ENST00000589353 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
RANBP3-216ENST00000589353 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
RANBP3-216ENST00000589353 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
RANBP3-216ENST00000589353 CUL7Q14999 1698 aa15.94■□□□□ 0.14
RANBP3-216ENST00000589353 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
RANBP3-216ENST00000589353 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
RANBP3-216ENST00000589353 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.132e-8■■■■■ 27.6
RANBP3-216ENST00000589353 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
RANBP3-216ENST00000589353 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
RANBP3-216ENST00000589353 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
RANBP3-216ENST00000589353 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
RANBP3-216ENST00000589353 CLIP1P30622 1438 aa15.8■□□□□ 0.12
RANBP3-216ENST00000589353 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
RANBP3-216ENST00000589353 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
RANBP3-216ENST00000589353 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
RANBP3-216ENST00000589353 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
RANBP3-216ENST00000589353 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
RANBP3-216ENST00000589353 SYNJ2O15056 1496 aa15.68■□□□□ 0.1
RANBP3-216ENST00000589353 CHMP7Q8WUX9 453 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms