RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
MBD1-217ENST00000588937 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
MBD1-217ENST00000588937 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.36e-7■■■□□ 18.9
MBD1-217ENST00000588937 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
MBD1-217ENST00000588937 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
MBD1-217ENST00000588937 CTTNBP2Q8WZ74 1663 aa23.08■■□□□ 1.29
MBD1-217ENST00000588937 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
MBD1-217ENST00000588937 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
MBD1-217ENST00000588937 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
MBD1-217ENST00000588937 EFCAB5A4FU69 1503 aa23.05■■□□□ 1.28
MBD1-217ENST00000588937 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
MBD1-217ENST00000588937 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
MBD1-217ENST00000588937 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
MBD1-217ENST00000588937 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
MBD1-217ENST00000588937 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
MBD1-217ENST00000588937 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
MBD1-217ENST00000588937 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.26
MBD1-217ENST00000588937 SYNJ2O15056 1496 aa22.89■■□□□ 1.26
MBD1-217ENST00000588937 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
MBD1-217ENST00000588937 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
MBD1-217ENST00000588937 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
MBD1-217ENST00000588937 FHOD3Q2V2M9 1422 aa22.87■■□□□ 1.25
MBD1-217ENST00000588937 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
MBD1-217ENST00000588937 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
MBD1-217ENST00000588937 CASKIN1Q8WXD9 1431 aa22.85■■□□□ 1.25
MBD1-217ENST00000588937 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
MBD1-217ENST00000588937 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
MBD1-217ENST00000588937 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
MBD1-217ENST00000588937 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
MBD1-217ENST00000588937 IQGAP2Q13576 1575 aa22.77■■□□□ 1.23
MBD1-217ENST00000588937 NUP160Q12769 1436 aa22.75■■□□□ 1.23
MBD1-217ENST00000588937 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
MBD1-217ENST00000588937 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
MBD1-217ENST00000588937 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
MBD1-217ENST00000588937 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
MBD1-217ENST00000588937 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
MBD1-217ENST00000588937 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
MBD1-217ENST00000588937 CHD1O14646 1710 aa22.65■■□□□ 1.22
MBD1-217ENST00000588937 DHX57Q6P158 1386 aaKnown RBP22.61■■□□□ 1.21
MBD1-217ENST00000588937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.6■■□□□ 1.21
MBD1-217ENST00000588937 FBLN2P98095 1184 aa22.6■■□□□ 1.21
MBD1-217ENST00000588937 LRRIQ1Q96JM4 1722 aa22.57■■□□□ 1.2
MBD1-217ENST00000588937 MTUS2Q5JR59 1369 aa22.57■■□□□ 1.2
MBD1-217ENST00000588937 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
MBD1-217ENST00000588937 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
MBD1-217ENST00000588937 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
MBD1-217ENST00000588937 ITGAEP38570 1179 aa22.55■■□□□ 1.2
MBD1-217ENST00000588937 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
MBD1-217ENST00000588937 EHBP1L1Q8N3D4 1523 aa22.53■■□□□ 1.2
MBD1-217ENST00000588937 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
MBD1-217ENST00000588937 SUPT6HQ7KZ85 1726 aaKnown RBP22.52■■□□□ 1.2
MBD1-217ENST00000588937 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
MBD1-217ENST00000588937 SETD5Q9C0A6 1442 aa22.5■■□□□ 1.19
MBD1-217ENST00000588937 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
MBD1-217ENST00000588937 SHROOM2Q13796 1616 aa22.48■■□□□ 1.19
MBD1-217ENST00000588937 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
MBD1-217ENST00000588937 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
MBD1-217ENST00000588937 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.18
MBD1-217ENST00000588937 CLASP1Q7Z460 1538 aa22.45■■□□□ 1.18
MBD1-217ENST00000588937 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
MBD1-217ENST00000588937 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
MBD1-217ENST00000588937 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
MBD1-217ENST00000588937 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
MBD1-217ENST00000588937 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
MBD1-217ENST00000588937 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
MBD1-217ENST00000588937 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
MBD1-217ENST00000588937 PTPN23Q9H3S7 1636 aa22.33■■□□□ 1.17
MBD1-217ENST00000588937 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
MBD1-217ENST00000588937 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
MBD1-217ENST00000588937 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
MBD1-217ENST00000588937 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
MBD1-217ENST00000588937 MIA2Q96PC5 1412 aa22.27■■□□□ 1.16
MBD1-217ENST00000588937 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
MBD1-217ENST00000588937 ABCA8O94911 1581 aa22.25■■□□□ 1.15
MBD1-217ENST00000588937 NUP153P49790 1475 aaKnown RBP22.24■■□□□ 1.15
MBD1-217ENST00000588937 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
MBD1-217ENST00000588937 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
MBD1-217ENST00000588937 PTPRGP23470 1445 aa22.21■■□□□ 1.15
MBD1-217ENST00000588937 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
MBD1-217ENST00000588937 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
MBD1-217ENST00000588937 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.14
MBD1-217ENST00000588937 TIMELESSQ9UNS1 1208 aa22.17■■□□□ 1.14
MBD1-217ENST00000588937 NAIPQ13075 1403 aa22.17■■□□□ 1.14
MBD1-217ENST00000588937 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
MBD1-217ENST00000588937 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
MBD1-217ENST00000588937 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
MBD1-217ENST00000588937 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
MBD1-217ENST00000588937 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
MBD1-217ENST00000588937 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
MBD1-217ENST00000588937 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
MBD1-217ENST00000588937 UHRF1BP1LA0JNW5 1464 aa22.08■■□□□ 1.13
MBD1-217ENST00000588937 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
MBD1-217ENST00000588937 ATP10BO94823 1461 aa22.07■■□□□ 1.12
MBD1-217ENST00000588937 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
MBD1-217ENST00000588937 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
MBD1-217ENST00000588937 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
MBD1-217ENST00000588937 DNMT1P26358 1616 aaKnown RBP22.04■■□□□ 1.12
MBD1-217ENST00000588937 ROCK1Q13464 1354 aa22.02■■□□□ 1.12
MBD1-217ENST00000588937 DAPK1P53355 1430 aa22.01■■□□□ 1.11
MBD1-217ENST00000588937 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms