RNA–Protein interactions for RNA: ENST00000588896.1

CACNA2D4-224, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-224ENST00000588896 PRXQ9BXM0 1461 aa22.77■■□□□ 1.24
CACNA2D4-224ENST00000588896 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
CACNA2D4-224ENST00000588896 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
CACNA2D4-224ENST00000588896 SHROOM2Q13796 1616 aa22.7■■□□□ 1.22
CACNA2D4-224ENST00000588896 JPH4Q96JJ6 628 aa22.68■■□□□ 1.22
CACNA2D4-224ENST00000588896 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
CACNA2D4-224ENST00000588896 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
CACNA2D4-224ENST00000588896 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
CACNA2D4-224ENST00000588896 CYB5RLQ6IPT4 315 aa22.6■■□□□ 1.21
CACNA2D4-224ENST00000588896 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
CACNA2D4-224ENST00000588896 KIF21BO75037 1637 aa22.57■■□□□ 1.2
CACNA2D4-224ENST00000588896 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
CACNA2D4-224ENST00000588896 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
CACNA2D4-224ENST00000588896 UGGT2Q9NYU1 1516 aa22.51■■□□□ 1.19
CACNA2D4-224ENST00000588896 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
CACNA2D4-224ENST00000588896 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
CACNA2D4-224ENST00000588896 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
CACNA2D4-224ENST00000588896 PTPRGP23470 1445 aa22.4■■□□□ 1.18
CACNA2D4-224ENST00000588896 KIAA0556O60303 1618 aa22.4■■□□□ 1.18
CACNA2D4-224ENST00000588896 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
CACNA2D4-224ENST00000588896 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
CACNA2D4-224ENST00000588896 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
CACNA2D4-224ENST00000588896 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
CACNA2D4-224ENST00000588896 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
CACNA2D4-224ENST00000588896 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.16
CACNA2D4-224ENST00000588896 UACAQ9BZF9 1416 aa22.25■■□□□ 1.15
CACNA2D4-224ENST00000588896 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
CACNA2D4-224ENST00000588896 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
CACNA2D4-224ENST00000588896 ADCY10Q96PN6 1610 aa22.24■■□□□ 1.15
CACNA2D4-224ENST00000588896 UHRF1BP1LA0JNW5 1464 aa22.22■■□□□ 1.15
CACNA2D4-224ENST00000588896 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
CACNA2D4-224ENST00000588896 FHOD3Q2V2M9 1422 aa22.18■■□□□ 1.14
CACNA2D4-224ENST00000588896 PLB1Q6P1J6 1458 aa22.17■■□□□ 1.14
CACNA2D4-224ENST00000588896 ABCA8O94911 1581 aa22.14■■□□□ 1.13
CACNA2D4-224ENST00000588896 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
CACNA2D4-224ENST00000588896 MAPKBP1O60336 1514 aa22.12■■□□□ 1.13
CACNA2D4-224ENST00000588896 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
CACNA2D4-224ENST00000588896 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
CACNA2D4-224ENST00000588896 CLIP1P30622 1438 aa22.08■■□□□ 1.13
CACNA2D4-224ENST00000588896 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
CACNA2D4-224ENST00000588896 RAPGEF6Q8TEU7 1601 aa22.05■■□□□ 1.12
CACNA2D4-224ENST00000588896 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
CACNA2D4-224ENST00000588896 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.12
CACNA2D4-224ENST00000588896 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
CACNA2D4-224ENST00000588896 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
CACNA2D4-224ENST00000588896 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
CACNA2D4-224ENST00000588896 NUP153P49790 1475 aaKnown RBP21.99■■□□□ 1.11
CACNA2D4-224ENST00000588896 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
CACNA2D4-224ENST00000588896 ATP10BO94823 1461 aa21.96■■□□□ 1.11
CACNA2D4-224ENST00000588896 FAM69CQ0P6D2 419 aa21.95■■□□□ 1.1
CACNA2D4-224ENST00000588896 WDR7Q9Y4E6 1490 aa21.95■■□□□ 1.1
CACNA2D4-224ENST00000588896 DIP2BQ9P265 1576 aa21.95■■□□□ 1.1
CACNA2D4-224ENST00000588896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
CACNA2D4-224ENST00000588896 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
CACNA2D4-224ENST00000588896 HECW1Q76N89 1606 aa21.92■■□□□ 1.1
CACNA2D4-224ENST00000588896 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
CACNA2D4-224ENST00000588896 EPRSP07814 1512 aaKnown RBP21.89■■□□□ 1.09
CACNA2D4-224ENST00000588896 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
CACNA2D4-224ENST00000588896 PCF11O94913 1555 aaKnown RBP21.86■■□□□ 1.09
CACNA2D4-224ENST00000588896 GLI2P10070 1586 aa21.86■■□□□ 1.09
CACNA2D4-224ENST00000588896 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
CACNA2D4-224ENST00000588896 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
CACNA2D4-224ENST00000588896 CDK13Q14004 1512 aaKnown RBP21.83■■□□□ 1.09
CACNA2D4-224ENST00000588896 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
CACNA2D4-224ENST00000588896 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
CACNA2D4-224ENST00000588896 CCDC18Q5T9S5 1454 aa21.81■■□□□ 1.08
CACNA2D4-224ENST00000588896 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
CACNA2D4-224ENST00000588896 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
CACNA2D4-224ENST00000588896 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
CACNA2D4-224ENST00000588896 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
CACNA2D4-224ENST00000588896 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
CACNA2D4-224ENST00000588896 TROQ12816 1431 aaPredicted RBP21.7■■□□□ 1.06
CACNA2D4-224ENST00000588896 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
CACNA2D4-224ENST00000588896 CFAP43Q8NDM7 1665 aa21.69■■□□□ 1.06
CACNA2D4-224ENST00000588896 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
CACNA2D4-224ENST00000588896 MAGI3Q5TCQ9 1506 aa21.67■■□□□ 1.06
CACNA2D4-224ENST00000588896 KIF14Q15058 1648 aa21.63■■□□□ 1.05
CACNA2D4-224ENST00000588896 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
CACNA2D4-224ENST00000588896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.63■■□□□ 1.05
CACNA2D4-224ENST00000588896 PPRC1Q5VV67 1664 aaKnown RBP21.63■■□□□ 1.05
CACNA2D4-224ENST00000588896 MTUS2Q5JR59 1369 aa21.6■■□□□ 1.05
CACNA2D4-224ENST00000588896 TTC37Q6PGP7 1564 aa21.59■■□□□ 1.05
CACNA2D4-224ENST00000588896 KDM6BO15054 1643 aa21.57■■□□□ 1.04
CACNA2D4-224ENST00000588896 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
CACNA2D4-224ENST00000588896 EHBP1L1Q8N3D4 1523 aa21.55■■□□□ 1.04
CACNA2D4-224ENST00000588896 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
CACNA2D4-224ENST00000588896 NEO1Q92859 1461 aa21.54■■□□□ 1.04
CACNA2D4-224ENST00000588896 PLCH2O75038 1416 aa21.54■■□□□ 1.04
CACNA2D4-224ENST00000588896 MAP3K1Q13233 1512 aa21.53■■□□□ 1.04
CACNA2D4-224ENST00000588896 APLP2Q06481 763 aa21.52■■□□□ 1.04
CACNA2D4-224ENST00000588896 FANCAO15360 1455 aa21.52■■□□□ 1.03
CACNA2D4-224ENST00000588896 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
CACNA2D4-224ENST00000588896 CFAP74Q9C0B2 1584 aa21.49■■□□□ 1.03
CACNA2D4-224ENST00000588896 MYO5CQ9NQX4 1742 aa21.47■■□□□ 1.03
CACNA2D4-224ENST00000588896 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
CACNA2D4-224ENST00000588896 LRRC9Q6ZRR7 1453 aa21.46■■□□□ 1.03
CACNA2D4-224ENST00000588896 COL17A1Q9UMD9 1497 aaPredicted RBP21.46■■□□□ 1.03
CACNA2D4-224ENST00000588896 ARHGAP5Q13017 1502 aa21.46■■□□□ 1.03
CACNA2D4-224ENST00000588896 AKNAQ7Z591 1439 aa21.46■■□□□ 1.03
CACNA2D4-224ENST00000588896 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms