RNA–Protein interactions for RNA: ENST00000588896.1

CACNA2D4-224, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-224ENST00000588896 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
CACNA2D4-224ENST00000588896 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
CACNA2D4-224ENST00000588896 ABCC9O60706 1549 aa28.41■■■□□ 2.14
CACNA2D4-224ENST00000588896 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
CACNA2D4-224ENST00000588896 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
CACNA2D4-224ENST00000588896 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
CACNA2D4-224ENST00000588896 NACADO15069 1562 aa27.4■■□□□ 1.98
CACNA2D4-224ENST00000588896 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
CACNA2D4-224ENST00000588896 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
CACNA2D4-224ENST00000588896 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
CACNA2D4-224ENST00000588896 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
CACNA2D4-224ENST00000588896 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
CACNA2D4-224ENST00000588896 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
CACNA2D4-224ENST00000588896 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
CACNA2D4-224ENST00000588896 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
CACNA2D4-224ENST00000588896 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
CACNA2D4-224ENST00000588896 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
CACNA2D4-224ENST00000588896 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
CACNA2D4-224ENST00000588896 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
CACNA2D4-224ENST00000588896 SMARCA4P51532 1647 aa25.46■■□□□ 1.67
CACNA2D4-224ENST00000588896 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
CACNA2D4-224ENST00000588896 ATAD2BQ9ULI0 1458 aa25.32■■□□□ 1.64
CACNA2D4-224ENST00000588896 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
CACNA2D4-224ENST00000588896 NCAPD3P42695 1498 aa25.29■■□□□ 1.64
CACNA2D4-224ENST00000588896 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
CACNA2D4-224ENST00000588896 HMGXB3Q12766 1538 aa25.18■■□□□ 1.62
CACNA2D4-224ENST00000588896 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
CACNA2D4-224ENST00000588896 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
CACNA2D4-224ENST00000588896 WIZO95785 1651 aa25.02■■□□□ 1.6
CACNA2D4-224ENST00000588896 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
CACNA2D4-224ENST00000588896 NESP48681 1621 aa24.6■■□□□ 1.53
CACNA2D4-224ENST00000588896 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CACNA2D4-224ENST00000588896 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
CACNA2D4-224ENST00000588896 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
CACNA2D4-224ENST00000588896 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
CACNA2D4-224ENST00000588896 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
CACNA2D4-224ENST00000588896 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
CACNA2D4-224ENST00000588896 CFTRP13569 1480 aa24.45■■□□□ 1.5
CACNA2D4-224ENST00000588896 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
CACNA2D4-224ENST00000588896 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
CACNA2D4-224ENST00000588896 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
CACNA2D4-224ENST00000588896 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
CACNA2D4-224ENST00000588896 CUX2O14529 1486 aa24.19■■□□□ 1.46
CACNA2D4-224ENST00000588896 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CACNA2D4-224ENST00000588896 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
CACNA2D4-224ENST00000588896 WDR62O43379 1518 aa24.09■■□□□ 1.45
CACNA2D4-224ENST00000588896 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
CACNA2D4-224ENST00000588896 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
CACNA2D4-224ENST00000588896 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
CACNA2D4-224ENST00000588896 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
CACNA2D4-224ENST00000588896 CUX1P39880 1505 aa23.75■■□□□ 1.39
CACNA2D4-224ENST00000588896 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
CACNA2D4-224ENST00000588896 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
CACNA2D4-224ENST00000588896 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
CACNA2D4-224ENST00000588896 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
CACNA2D4-224ENST00000588896 SOGA1O94964 1423 aa23.63■■□□□ 1.37
CACNA2D4-224ENST00000588896 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
CACNA2D4-224ENST00000588896 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
CACNA2D4-224ENST00000588896 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
CACNA2D4-224ENST00000588896 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
CACNA2D4-224ENST00000588896 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
CACNA2D4-224ENST00000588896 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
CACNA2D4-224ENST00000588896 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CACNA2D4-224ENST00000588896 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
CACNA2D4-224ENST00000588896 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
CACNA2D4-224ENST00000588896 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.353e-6■■■■□ 24.7
CACNA2D4-224ENST00000588896 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
CACNA2D4-224ENST00000588896 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
CACNA2D4-224ENST00000588896 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
CACNA2D4-224ENST00000588896 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
CACNA2D4-224ENST00000588896 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
CACNA2D4-224ENST00000588896 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
CACNA2D4-224ENST00000588896 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
CACNA2D4-224ENST00000588896 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
CACNA2D4-224ENST00000588896 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
CACNA2D4-224ENST00000588896 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
CACNA2D4-224ENST00000588896 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
CACNA2D4-224ENST00000588896 FBLN2P98095 1184 aa23.19■■□□□ 1.3
CACNA2D4-224ENST00000588896 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
CACNA2D4-224ENST00000588896 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
CACNA2D4-224ENST00000588896 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
CACNA2D4-224ENST00000588896 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
CACNA2D4-224ENST00000588896 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
CACNA2D4-224ENST00000588896 CHD1O14646 1710 aa23.11■■□□□ 1.29
CACNA2D4-224ENST00000588896 IGF1RP08069 1367 aa23.05■■□□□ 1.28
CACNA2D4-224ENST00000588896 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
CACNA2D4-224ENST00000588896 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
CACNA2D4-224ENST00000588896 CUL7Q14999 1698 aa22.99■■□□□ 1.27
CACNA2D4-224ENST00000588896 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
CACNA2D4-224ENST00000588896 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
CACNA2D4-224ENST00000588896 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
CACNA2D4-224ENST00000588896 NUP160Q12769 1436 aa22.92■■□□□ 1.26
CACNA2D4-224ENST00000588896 EEA1Q15075 1411 aa22.88■■□□□ 1.25
CACNA2D4-224ENST00000588896 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
CACNA2D4-224ENST00000588896 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
CACNA2D4-224ENST00000588896 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
CACNA2D4-224ENST00000588896 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
CACNA2D4-224ENST00000588896 RIMBP3CA6NJZ7 1639 aa22.77■■□□□ 1.24
CACNA2D4-224ENST00000588896 RIMBP3BA6NNM3 1639 aa22.77■■□□□ 1.24
CACNA2D4-224ENST00000588896 RIMBP3Q9UFD9 1639 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms