RNA–Protein interactions for RNA: ENST00000587299.1

ATP6V0A1-211, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 3

Gene ATP6V0A1, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-211ENST00000587299 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
ATP6V0A1-211ENST00000587299 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
ATP6V0A1-211ENST00000587299 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
ATP6V0A1-211ENST00000587299 ZNF608Q9ULD9 1512 aaPredicted RBP11.19□□□□□ -0.62
ATP6V0A1-211ENST00000587299 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
ATP6V0A1-211ENST00000587299 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
ATP6V0A1-211ENST00000587299 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
ATP6V0A1-211ENST00000587299 CLIP1P30622 1438 aa11.18□□□□□ -0.62
ATP6V0A1-211ENST00000587299 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
ATP6V0A1-211ENST00000587299 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
ATP6V0A1-211ENST00000587299 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
ATP6V0A1-211ENST00000587299 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
ATP6V0A1-211ENST00000587299 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
ATP6V0A1-211ENST00000587299 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
ATP6V0A1-211ENST00000587299 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
ATP6V0A1-211ENST00000587299 VPS8Q8N3P4 1428 aa11.11□□□□□ -0.63
ATP6V0A1-211ENST00000587299 EFCAB5A4FU69 1503 aa11.11□□□□□ -0.63
ATP6V0A1-211ENST00000587299 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
ATP6V0A1-211ENST00000587299 SAMD9Q5K651 1589 aa11.1□□□□□ -0.63
ATP6V0A1-211ENST00000587299 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
ATP6V0A1-211ENST00000587299 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
ATP6V0A1-211ENST00000587299 IQGAP2Q13576 1575 aa11.06□□□□□ -0.64
ATP6V0A1-211ENST00000587299 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
ATP6V0A1-211ENST00000587299 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
ATP6V0A1-211ENST00000587299 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
ATP6V0A1-211ENST00000587299 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
ATP6V0A1-211ENST00000587299 NUP160Q12769 1436 aa11.01□□□□□ -0.65
ATP6V0A1-211ENST00000587299 PCF11O94913 1555 aaKnown RBP11.01□□□□□ -0.65
ATP6V0A1-211ENST00000587299 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
ATP6V0A1-211ENST00000587299 CHD1O14646 1710 aa11□□□□□ -0.65
ATP6V0A1-211ENST00000587299 KIAA0586Q9BVV6 1533 aa10.99□□□□□ -0.65
ATP6V0A1-211ENST00000587299 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
ATP6V0A1-211ENST00000587299 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
ATP6V0A1-211ENST00000587299 KIAA0556O60303 1618 aa10.97□□□□□ -0.65
ATP6V0A1-211ENST00000587299 FHOD3Q2V2M9 1422 aa10.96□□□□□ -0.65
ATP6V0A1-211ENST00000587299 TIAM1Q13009 1591 aa10.95□□□□□ -0.66
ATP6V0A1-211ENST00000587299 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
ATP6V0A1-211ENST00000587299 LRRIQ1Q96JM4 1722 aa10.94□□□□□ -0.66
ATP6V0A1-211ENST00000587299 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
ATP6V0A1-211ENST00000587299 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
ATP6V0A1-211ENST00000587299 SHROOM2Q13796 1616 aa10.92□□□□□ -0.66
ATP6V0A1-211ENST00000587299 TRIM26Q12899 539 aaPredicted RBP10.91□□□□□ -0.66
ATP6V0A1-211ENST00000587299 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
ATP6V0A1-211ENST00000587299 RNF216Q9NWF9 866 aaPredicted RBP10.89□□□□□ -0.67
ATP6V0A1-211ENST00000587299 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
ATP6V0A1-211ENST00000587299 HECW1Q76N89 1606 aa10.88□□□□□ -0.67
ATP6V0A1-211ENST00000587299 CNKSR2Q8WXI2 1034 aa10.88□□□□□ -0.67
ATP6V0A1-211ENST00000587299 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
ATP6V0A1-211ENST00000587299 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
ATP6V0A1-211ENST00000587299 PCGF6Q9BYE7 350 aa10.85□□□□□ -0.67
ATP6V0A1-211ENST00000587299 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
ATP6V0A1-211ENST00000587299 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
ATP6V0A1-211ENST00000587299 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
ATP6V0A1-211ENST00000587299 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
ATP6V0A1-211ENST00000587299 ABCA8O94911 1581 aa10.81□□□□□ -0.68
ATP6V0A1-211ENST00000587299 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
ATP6V0A1-211ENST00000587299 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
ATP6V0A1-211ENST00000587299 RRBP1Q9P2E9 1410 aaKnown RBP10.8□□□□□ -0.68
ATP6V0A1-211ENST00000587299 NUP153P49790 1475 aaKnown RBP10.8□□□□□ -0.68
ATP6V0A1-211ENST00000587299 ARHGEF11O15085 1522 aa10.79□□□□□ -0.68
ATP6V0A1-211ENST00000587299 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
ATP6V0A1-211ENST00000587299 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
ATP6V0A1-211ENST00000587299 KANK4Q5T7N3 995 aaPredicted RBP10.79□□□□□ -0.68
ATP6V0A1-211ENST00000587299 APLP2Q06481 763 aa10.78□□□□□ -0.68
ATP6V0A1-211ENST00000587299 POTEHQ6S545 545 aa10.78□□□□□ -0.68
ATP6V0A1-211ENST00000587299 FBLN2P98095 1184 aa10.77□□□□□ -0.69
ATP6V0A1-211ENST00000587299 SUPT6HQ7KZ85 1726 aaKnown RBP10.77□□□□□ -0.69
ATP6V0A1-211ENST00000587299 CDK13Q14004 1512 aaKnown RBP10.77□□□□□ -0.69
ATP6V0A1-211ENST00000587299 JPH4Q96JJ6 628 aa10.76□□□□□ -0.69
ATP6V0A1-211ENST00000587299 ERCC6L2Q5T890 1561 aa10.76□□□□□ -0.69
ATP6V0A1-211ENST00000587299 PRG4Q92954 1404 aaPredicted RBP10.75□□□□□ -0.69
ATP6V0A1-211ENST00000587299 ADCY10Q96PN6 1610 aa10.75□□□□□ -0.69
ATP6V0A1-211ENST00000587299 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
ATP6V0A1-211ENST00000587299 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
ATP6V0A1-211ENST00000587299 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
ATP6V0A1-211ENST00000587299 NCOA2Q15596 1464 aa10.71□□□□□ -0.69
ATP6V0A1-211ENST00000587299 CCNB3Q8WWL7 1395 aa10.7□□□□□ -0.7
ATP6V0A1-211ENST00000587299 ABCC2Q92887 1545 aa10.69□□□□□ -0.7
ATP6V0A1-211ENST00000587299 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
ATP6V0A1-211ENST00000587299 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
ATP6V0A1-211ENST00000587299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATP6V0A1-211ENST00000587299 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
ATP6V0A1-211ENST00000587299 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
ATP6V0A1-211ENST00000587299 PTPRGP23470 1445 aa10.67□□□□□ -0.7
ATP6V0A1-211ENST00000587299 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
ATP6V0A1-211ENST00000587299 KIF14Q15058 1648 aa10.66□□□□□ -0.7
ATP6V0A1-211ENST00000587299 TCOF1Q13428 1488 aaKnown RBP10.66□□□□□ -0.7
ATP6V0A1-211ENST00000587299 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
ATP6V0A1-211ENST00000587299 ATP10BO94823 1461 aa10.65□□□□□ -0.7
ATP6V0A1-211ENST00000587299 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
ATP6V0A1-211ENST00000587299 PTPN23Q9H3S7 1636 aa10.65□□□□□ -0.7
ATP6V0A1-211ENST00000587299 ZCCHC11Q5TAX3 1644 aaKnown RBP10.63□□□□□ -0.71
ATP6V0A1-211ENST00000587299 CDC42BPAQ5VT25 1732 aa10.62□□□□□ -0.71
ATP6V0A1-211ENST00000587299 HRCP23327 699 aa10.62□□□□□ -0.71
ATP6V0A1-211ENST00000587299 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
ATP6V0A1-211ENST00000587299 KDM5BQ9UGL1 1544 aa10.62□□□□□ -0.71
ATP6V0A1-211ENST00000587299 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
ATP6V0A1-211ENST00000587299 MIA2Q96PC5 1412 aa10.61□□□□□ -0.71
ATP6V0A1-211ENST00000587299 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
ATP6V0A1-211ENST00000587299 CROCC2H7BZ55 1655 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms